mRNA_L-elsbetiae_contig1746.4903.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.790e-59 Identity = 268/404 (66.34%), Postives = 308/404 (76.24%), Query Frame = 3 Query: 294 LDLLVEVLTSKQWAELLKAPLERAATDGNRGLAQKLVRAGAEIGDSLHAAAQGGHAEIVNDLLEGGASVAAKDTDGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSLRCGEENRSIVHAAAQGEREEILMATIGRGADVDAINSELQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSREIPLFLATVNAGRRGAAKVVDVLLRSGADETILDGEGKAAADVVAEDAPKEDQ-TENVELVCELLANAPADRVWRRRGYLVLCRAHPG-ILQRVHARKSVLDDAARRTRSSAELGTTETICCTDTIGGIVVDGQMGSDWAVVVARVLRLQEEGIFRIIVGYL 1499 +D + E+LTS+Q AELL+A LE AA GN+ LAQ+LVRAGAEIGD+LH A GGH EIV+DLLE AS+AA D DG TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LR + HAAA EIL A I GADVDA++++ +T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NS PL A AGR+GAA+VV+ LLR+GADETI + +G A D++ ED +ED+ TE+VE V ELLANAPADR WRRRGYL++CRA P + +R + + ARRTRS A++ I G VD G +WAVVV++V+ LQEEGIFR IV YL Sbjct: 2 VDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIA-----GESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 131 bits (329), Expect = 2.870e-29 Identity = 179/432 (41.44%), Postives = 214/432 (49.54%), Query Frame = 3 Query: 219 IVNRDRREALRGAEEEXXXXXXXXXLDLLVEVLTSKQWAELLKAPLERAATDGNRGLAQKLVRAGAEIGDSLHAAAQGGHAEIVNDLLEGGASVAAKDTDGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSLRCGEENRSIVHAAAQGEREEILMATIGRGADVDAIN----SELQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSREIPLFLATVNAGRRGAAKVVDVLLRSGADETILDGEGKAAADVVAEDAPKEDQT-ENVELVCELLANAPADRVWRRRGYLVLCRAHPGILQRVHARKSVLDDAARRTRSSAELGTTETICCTDTIGGIVVDGQMGSDWAVVVARVLRLQEEGIFRIIVGYL 1499 + N R ALRG EE DL E T KQWA L++ LE AA G+ L +KLV AGAEIG ++HAA +GGH +I LLE GAS +A D +G TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D++ R G+ S + A + + I GADVDA N + L + ++AT AG++G +VVD+LLR GADET + G G AAD + P+ED+ E E V +LLANAPADR WRRR LVLCRA P +Q R + L+ ARVL L EEGIFR IV ++ Sbjct: 1 MANECARGALRGEEERI--------FDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVAT-RAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRIARLE-----------------------------------------ARVLGLVEEGIFRTIVRFI 382
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI) HSP 1 Score: 109 bits (273), Expect = 3.880e-22 Identity = 122/204 (59.80%), Postives = 147/204 (72.06%), Query Frame = 3 Query: 216 AIVNRDRREALRGAEEEXXXXXXXXXLDLLVEVLTSKQWAELLKAPLERAATDGNRGLAQKLVRAGAEIGDSLHAAAQGGHAEIVNDLLEGGASVAAKDTDGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSLRCGEENRSIVHAAAQGEREEILMATIGRGADVDAINSELQT 827 A+ N R AL+GAE E DL EVLT+ WAE+L+ PLE AA GN L QKL+RAGA++G +LHAA + GHAE+V +LLE GA V+ KDT G TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DV++RCG R+++ AA+ +IL A + GADV A++++ T Sbjct: 16 ALANEQGRRALKGAEGET--------FDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTRGSTPLQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVNVRCGLLKRTVLSLAAEKGHVDILRALVKHGADVTAVDNDRDT 211
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 102 bits (254), Expect = 1.690e-19 Identity = 224/427 (52.46%), Postives = 264/427 (61.83%), Query Frame = 3 Query: 225 NRDRREALRGAEEEXXXXXXXXXLDLLVEVLTSKQWAELLKAPLERAATDGNRGLAQKLVRAGAEIGD-SLHAAAQGGHAEIVNDLLEGGASVAAKDTDGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSLRCGEENRSIVHAAAQGEREEILMATIGRGADVDAINSELQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSREIPLFLATVNAGRR-GAAKVVDVLLRSGADETILDGEGKAAADVVAEDAPKEDQTENVELVCELLANAPADRVWRRRGYLVLCRAHPGILQRVHARKSVLDDAARRTRSSAELGTTETICCTDTIGGIVVDGQMGSDWAVVVARVLRLQEEGIFRIIVGYL 1499 N+ +E ++G + LDL+ + + +E L APLE A G+ GLA+KLV+AGA++G +LH + GH + LLE GASV + D TPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++R E S + AA + EI+ I G +V NS+ +T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+R G+A+VVD+LLR GADETI+ +G+ AAD + E+ E LLA APADR WRRRG LVLCRAHP LQ +G D A +VA V L+E G+FR IV YL Sbjct: 15 NKAAKETMKGEGQRV--------LDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQ------------------------------------------LGGDLAGLVAGVGGLEEVGVFRTIVLYL 391
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 102 bits (254), Expect = 2.450e-19 Identity = 72/156 (46.15%), Postives = 91/156 (58.33%), Query Frame = 3 Query: 1050 AGRRGAAKVVDVLLRSGADETILDGEGKAAADVVAEDAPKEDQT--ENVELVCELLANAPADRVWRRRGYLVLCRAHPGILQRVHARKSVLDDA----ARRTRSSAELGTTETICCTDTIGGIVVDGQMGSDWAVVVARVLRLQEEGIFRIIVGYL 1499 AGR+G+A++VD+LLR GADET D G+ AD V D V LV ELLANAPADR WRRRG LVLCRA L+R R+ D +RRTRS A+L ++ + G +G G +W RV+ L+EEGIFR +VG+L Sbjct: 272 AGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAW---LRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRG--TPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 101 bits (252), Expect = 2.890e-19 Identity = 194/427 (45.43%), Postives = 231/427 (54.10%), Query Frame = 3 Query: 225 NRDRREALRGAEEEXXXXXXXXXLDLLVEVLTSKQWAELLKAPLERAATDGNRGLAQKLVRAGAEIGD-SLHAAAQGGHAEIVNDLLEGGASVAAKDTDGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSLRCGEENRSIVHAAAQGEREEILMATIGRGADVDAINSELQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSREIPLFLATVNAG-RRGAAKVVDVLLRSGADETILDGEGKAAADVVAEDAPKEDQTENVELVCELLANAPADRVWRRRGYLVLCRAHPGILQRVHARKSVLDDAARRTRSSAELGTTETICCTDTIGGIVVDGQMGSDWAVVVARVLRLQEEGIFRIIVGYL 1499 N+ +E L+G EE LDL+++ + +E L APLE A G+ GLAQKLV+AGA+IG +LH A + GH I LLE GASV + D TPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++R E + S + AA + EIL I G +V+ + + T XXXXXXXXXXXXXXXXXXXXXXXXXX G RRG+ +VV +LLR GADETI+ +GK AAD + + + E LL APADR WRRRG LVLC A+P LQ +G D A +V RVL L+E G+FR IV YL Sbjct: 12 NKAAKETLKGEEERV--------LDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVN-LAAAFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQ------------------------------------------LGGDLAGLVDRVLGLEEVGVFRTIVLYL 387
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 1.520e-17 Identity = 200/406 (49.26%), Postives = 233/406 (57.39%), Query Frame = 3 Query: 303 LVEVLTSKQWAELLKAPLERAATDGNRGLAQKLVRAGAEIGDSLHAAAQGGHAEIVNDLLEGGASVAAKDT-DGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSLRCGEENRSIVHAAAQGEREEILMATIGRGADVDAINSELQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSREIPLFLATVN-AGRRGAAKVVDVLLRSGADETILDGEGKAAADVVAEDAPKEDQT-ENVELVCELLANAPADRVWRRRGYLVLCRAHP---GILQRV-HARKSVLDDAARRTRSSAELGTTETICCTDTIGGIVVDGQMGSDWAVVVARVLRLQEEGIFRIIVGYL 1499 + E T +QWA L A + AA G GL QKLV+AGAEIG ++HAAA G ++ N LL+ GAS+ DT DG TP XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXDV++R G+ XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX + AG GA +VVD+LLR ADET D G ++V P+ D NV+ V +LL AP DR WRRRG LVLCRAHP G+ Q H ++S + R TRS +L E + + G DG+ +W+ +V RVL L +EGIFR IVGYL Sbjct: 1 MAETCTPEQWAAWLSAAVVNAADKGKAGLVQKLVKAGAEIGVAMHAAALRGDQDVANSLLQNGASI--NDTFDGFTPLXXXXXXXXXXXXXXXXXXXXEIDAAGPKGTXXXXXXXXXXXXXXXXXXXXXXXDVAVRQGDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANIQATRINGETPLHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTV---LRVTRSRTKLVEREQVAG-GSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 6.330e-14 Identity = 71/174 (40.80%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 1020 EIPLFLATVNAGRRGAAKVVDVLLRSGADETILDGEGKAAADVVAEDAPKEDQ-TENVELVCELLANAPADRVWRRRGYLVLCRAH-PGILQRVHARKSVLDDA--ARRTRSSAELGTTETICCTDTIGGIVVDGQMGSDWAVVVARVL-------RLQEEG---IFRIIVGYL 1499 + PL L AG G A++VD+LLR GADET + G AAD+V + D E+V+ V +LLA APADR WRRRG+L+L RAH PG + R S A A+RTRSS E E DWA VV+ ++ L +G IF IVGYL Sbjct: 623 QTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEI------------------DWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 7.560e-14 Identity = 53/111 (47.75%), Postives = 67/111 (60.36%), Query Frame = 3 Query: 1020 EIPLFLATVNAGRRGAAKVVDVLLRSGADETILDGEGKAAADVVA---EDAPKEDQTENVELVCELLANAPADRVWRRRGYLVLCRAHPGILQRVHARKSVLDDAARRTRS 1343 E PL +A AGR+G +VD+LLR GADET L+ +G+ AA+VV E A ++VE V +LL NAP DR WRRRG+LVLCRA +R+ A S R RS Sbjct: 206 ETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRS 316
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.030e-13 Identity = 47/81 (58.02%), Postives = 54/81 (66.67%), Query Frame = 3 Query: 1038 ATVNAGRRGAAKVVDVLLRSGADETILDGEGKAAADVVA-EDAPKEDQTENVELVCELLANAPADRVWRRRGYLVLCRAHP 1277 AT AG G +VVD LLRSGADETILD EG+AA D+++ E A E + V +LL NA ADR W RR YLVLCR HP Sbjct: 91 ATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHP 171 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1746.4903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1746.4903.1 >prot_L-elsbetiae_contig1746.4903.1 ID=prot_L-elsbetiae_contig1746.4903.1|Name=mRNA_L-elsbetiae_contig1746.4903.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=432bp MAGAIVNRDRREALRGAEEETLRGAGEETLDLLVEVLTSKQWAELLKAPLback to top mRNA from alignment at L-elsbetiae_contig1746:1633..5428- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1746.4903.1 ID=mRNA_L-elsbetiae_contig1746.4903.1|Name=mRNA_L-elsbetiae_contig1746.4903.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3796bp|location=Sequence derived from alignment at L-elsbetiae_contig1746:1633..5428- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1746:1633..5428- >mRNA_L-elsbetiae_contig1746.4903.1 ID=mRNA_L-elsbetiae_contig1746.4903.1|Name=mRNA_L-elsbetiae_contig1746.4903.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2592bp|location=Sequence derived from alignment at L-elsbetiae_contig1746:1633..5428- (Laminarionema elsbetiae ELsaHSoW15)back to top |