mRNA_L-elsbetiae_contig17370.4863.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Match: D7FSV6_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV6_ECTSI) HSP 1 Score: 261 bits (666), Expect = 1.260e-81 Identity = 133/147 (90.48%), Postives = 141/147 (95.92%), Query Frame = 1 Query: 1 IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFIIHAVPVQYTRKFLENVVQHMPSGTPILSVSKGIETSSLMLMNDILKDMCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDLAKVSRAPT 441 IPTTLLVR+DSVAEHVN H+EHP+YLKGI LPQHIVATADPKEAL DATF+IHAVPVQYTRKFLENVV HMP+GTPILSVSKGIETSSLMLMNDILKD+CGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLAND+AKV +PT Sbjct: 306 IPTTLLVRSDSVAEHVNKHNEHPNYLKGIKLPQHIVATADPKEALRDATFVIHAVPVQYTRKFLENVVPHMPAGTPILSVSKGIETSSLMLMNDILKDLCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDMAKVLSSPT 452
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Match: A0A835YU39_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU39_9STRA) HSP 1 Score: 203 bits (517), Expect = 2.460e-62 Identity = 104/147 (70.75%), Postives = 120/147 (81.63%), Query Frame = 1 Query: 1 IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFIIHAVPVQYTRKFLENVVQHMPSGTPILSVSKGIETSSLMLMNDILKDMCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDLAKVSRAPT 441 IP+TLL+R +AEH+N HHEHP+YLKGI LP HI AT D K+AL DAT++IHAVPVQY+R FL+ V ++P G PILSVSKGIETSSL LM DIL + CG ERSYAFLSGPSFAREIA N ATAVVIASDDS LANDLA + +P+ Sbjct: 28 IPSTLLLRNAEIAEHINVHHEHPTYLKGIKLPWHIRATTDAKDALQDATYVIHAVPVQYSRAFLKKVASYIPPGAPILSVSKGIETSSLSLMTDILAETCGPERSYAFLSGPSFAREIAQNMATAVVIASDDSQLANDLANLLSSPS 174
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Match: A0A7S2EWB9_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EWB9_9STRA) HSP 1 Score: 175 bits (444), Expect = 7.510e-52 Identity = 92/140 (65.71%), Postives = 109/140 (77.86%), Query Frame = 1 Query: 1 IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFIIHAVPVQYTRKFLENVVQHMPSGTPILSVSKGIETSSLMLMNDILKDMCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDLA 420 +P LLVR++SVA ++NT+H HP Y+ I LP I AT DP AL DAT+IIHAVP QY+R+FL+++ +H+P TPILS SKGIETSSL MNDILKD G ERSYAFLSGPSFAREI ATAVVIAS+D LA+DLA Sbjct: 119 VPVQLLVRSESVANYLNTNHTHPRYMSDIKLPTAIRATTDPDTALSDATYIIHAVPCQYSREFLDSIKEHIPPSTPILSASKGIETSSLGFMNDILKDCLGEERSYAFLSGPSFAREICEGVATAVVIASEDMDLADDLA 258
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Match: A0A7S2HNC4_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HNC4_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.020e-50 Identity = 91/140 (65.00%), Postives = 108/140 (77.14%), Query Frame = 1 Query: 1 IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFIIHAVPVQYTRKFLENVVQHMPSGTPILSVSKGIETSSLMLMNDILKDMCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDLA 420 +P TLLVR+D +A H+NT H HP+Y+ I LP I AT DP AL DAT+IIHAVP QY+R FL ++ +H+P GTP+LS SKGIETSSL MNDIL+D G +RSYAFLSGPSFAREI ATAVV+ASDD LA+DLA Sbjct: 184 VPVTLLVRSDDIANHLNTKHSHPTYMTDIQLPVTIRATTDPATALSDATYIIHAVPCQYSRDFLMSIKEHIPGGTPVLSASKGIETSSLGFMNDILRDCLGEDRSYAFLSGPSFAREICEGVATAVVVASDDLDLADDLA 323
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Match: A0A7S3V808_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V808_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.430e-50 Identity = 89/142 (62.68%), Postives = 111/142 (78.17%), Query Frame = 1 Query: 1 IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFIIHAVPVQYTRKFLENVVQHMPSGTPILSVSKGIETSSLMLMNDILKDMCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDLAKV 426 IPTTLL+R +A+ +N H HP Y+ I+LP+ I ATADP+ AL DAT+IIHAVPVQ+TRKFL++V +++P P+LS SKGIET+SL M DILK+ G +RSYAFLSGPSFAREI N ATAVVIAS+D LA+DLA + Sbjct: 114 IPTTLLIRDQDIADQLNLEHRHPRYMSDISLPKMIHATADPESALSDATYIIHAVPVQFTRKFLDSVKEYIPKNVPVLSGSKGIETTSLGFMMDILKECLGDDRSYAFLSGPSFAREICENVATAVVIASEDLMLADDLADI 255
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Match: A0A7R9ZII2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZII2_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.070e-49 Identity = 86/140 (61.43%), Postives = 106/140 (75.71%), Query Frame = 1 Query: 1 IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFIIHAVPVQYTRKFLENVVQHMPSGTPILSVSKGIETSSLMLMNDILKDMCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDLA 420 IP TLLVR++ VA+ +N H HP Y+ I LP I AT+DP AL DAT+++HAVP QY+R FLE+V +H+P G P++S SKGIET+SL M DIL+D G +RSYAFLSGPSFA EI ATAVVIASDD+ LA+DLA Sbjct: 78 IPVTLLVRSEDVADELNAKHRHPRYMPDIALPTTIRATSDPATALSDATYVVHAVPCQYSRDFLESVKEHVPPGVPVVSGSKGIETTSLGFMADILRDCLGDKRSYAFLSGPSFAHEICQGVATAVVIASDDALLADDLA 217
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Match: A0A7S3Q1I8_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1I8_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.610e-49 Identity = 89/142 (62.68%), Postives = 111/142 (78.17%), Query Frame = 1 Query: 1 IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFIIHAVPVQYTRKFLENVVQHMPSGTPILSVSKGIETSSLMLMNDILKDMCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDLAKV 426 IPTTLL+R +A+ +N H HP Y+ I+LP+ I ATADP+ AL DAT+IIHAVPVQ+TRKFL++V +++P P+LS SKGIET+SL M DILK+ G +RSYAFLSGPSFAREI N ATAVVIAS+D LA+DLA + Sbjct: 114 IPTTLLIRDQDIADQLNLEHRHPRYMSDISLPKMIHATADPESALSDATYIIHAVPVQFTRKFLDSVKEYIPKNVPVLSGSKGIETTSLGFMMDILKECLGDDRSYAFLSGPSFAREICENVATAVVIASEDLMLADDLADI 255
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Match: B8BQG6_THAPS (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQG6_THAPS) HSP 1 Score: 170 bits (431), Expect = 2.850e-49 Identity = 89/140 (63.57%), Postives = 106/140 (75.71%), Query Frame = 1 Query: 1 IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFIIHAVPVQYTRKFLENVVQHMPSGTPILSVSKGIETSSLMLMNDILKDMCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDLA 420 +PTTLLVR++ VA H+N +H HP Y+ I LP+ + AT D K AL DAT+IIHAVPVQYTR+FL +V +P P+LS SKGIETSSL M DILK+ G +RSYAFLSGPSFAREI ATAVVIAS+D LA+DLA Sbjct: 38 VPTTLLVRSEDVASHINENHRHPRYMSDICLPRMVRATCDKKSALSDATYIIHAVPVQYTREFLNSVKDDIPPNVPVLSASKGIETSSLGFMADILKECLGEDRSYAFLSGPSFAREICEGVATAVVIASEDLMLADDLA 177
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Match: A0A7S2A6H2_TRICV (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6H2_TRICV) HSP 1 Score: 171 bits (434), Expect = 3.390e-49 Identity = 89/140 (63.57%), Postives = 106/140 (75.71%), Query Frame = 1 Query: 1 IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFIIHAVPVQYTRKFLENVVQHMPSGTPILSVSKGIETSSLMLMNDILKDMCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDLA 420 IP TLLVR D+VAE +N+ H HP Y+ ITLP I AT DP AL DAT+++HAVP QY+R+FL +V H+P P+LS SKGIET+SL M DIL+D G +RSYAFLSGPSFAREI ATAVV+ASDDS LA+DLA Sbjct: 89 IPVTLLVRKDTVAESINSKHSHPQYMTDITLPVTIRATTDPATALSDATYVVHAVPCQYSREFLMSVKDHVPPSAPVLSASKGIETTSLGFMADILRDCLGEQRSYAFLSGPSFAREICEGVATAVVVASDDSLLADDLA 228
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Match: B7FQ11_PHATC (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ11_PHATC) HSP 1 Score: 170 bits (430), Expect = 3.560e-49 Identity = 88/140 (62.86%), Postives = 109/140 (77.86%), Query Frame = 1 Query: 1 IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFIIHAVPVQYTRKFLENVVQHMPSGTPILSVSKGIETSSLMLMNDILKDMCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDLA 420 IPTTLLVR+D +A+ +NT+H HP Y+K I LP I AT+DP++AL DAT+I+HAVPVQY+R FL++V + + TP+LS SKGIETSSL M DILK+ G +R YAFLSGPSFAREI ATAVV+AS+D LA DLA Sbjct: 34 IPTTLLVRSDDIAQSINTNHTHPRYMKDIVLPARIRATSDPEKALSDATYIVHAVPVQYSRAFLDSVKEFIAPNTPVLSGSKGIETSSLGFMADILKESLGRDRPYAFLSGPSFAREICEGVATAVVVASEDLMLARDLA 173 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17370.4863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17370.4863.1 >prot_L-elsbetiae_contig17370.4863.1 ID=prot_L-elsbetiae_contig17370.4863.1|Name=mRNA_L-elsbetiae_contig17370.4863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=147bp IPTTLLVRTDSVAEHVNTHHEHPSYLKGITLPQHIVATADPKEALGDATFback to top mRNA from alignment at L-elsbetiae_contig17370:152..2492- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17370.4863.1 ID=mRNA_L-elsbetiae_contig17370.4863.1|Name=mRNA_L-elsbetiae_contig17370.4863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2341bp|location=Sequence derived from alignment at L-elsbetiae_contig17370:152..2492- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17370:152..2492- >mRNA_L-elsbetiae_contig17370.4863.1 ID=mRNA_L-elsbetiae_contig17370.4863.1|Name=mRNA_L-elsbetiae_contig17370.4863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=882bp|location=Sequence derived from alignment at L-elsbetiae_contig17370:152..2492- (Laminarionema elsbetiae ELsaHSoW15)back to top |