mRNA_L-elsbetiae_contig17364.4860.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig17364.4860.1
Unique NamemRNA_L-elsbetiae_contig17364.4860.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Match: D7FW67_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW67_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 4.700e-103
Identity = 166/228 (72.81%), Postives = 193/228 (84.65%), Query Frame = 1
Query:   46 VELGLRSMRVGEQCIIRCESRFAYGPDGCPATKEGDADLPSNSDVEVRVELLGVQSTKSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSAANTVAGVEFPNERANAFREARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNAKALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSARVKAYKKKRRAVEETMARSLLAGSKA 729
            VELGLR MRVG+QC++RCE+RFAYG  GCPATK GD DLP ++D+EVR+ELL +  +  V DMSPEE  AEGERKK+VGNGHFER AYKKALRAYT+AAN VA +EFP   ++ FREAR+LRIDCGNNIA TC RLG+LEKAKEAAVGVLE DP N KALFRAGQVSSLQSNF EAR+AL++A ELNP SK +QAEL RL+AR+K+YK KR+A++ETM RSL  GSKA
Sbjct:   24 VELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSILPSTPVPDMSPEEICAEGERKKLVGNGHFERTAYKKALRAYTAAANAVAELEFPTGDSDTFREARRLRIDCGNNIAMTCYRLGELEKAKEAAVGVLEEDPTNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLAARIKSYKAKRQAMQETMGRSLFEGSKA 251          
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Match: A0A6H5JHX5_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX5_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 2.280e-102
Identity = 166/228 (72.81%), Postives = 193/228 (84.65%), Query Frame = 1
Query:   46 VELGLRSMRVGEQCIIRCESRFAYGPDGCPATKEGDADLPSNSDVEVRVELLGVQSTKSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSAANTVAGVEFPNERANAFREARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNAKALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSARVKAYKKKRRAVEETMARSLLAGSKA 729
            VELGLR MRVG+QC++RCE+RFAYG  GCPATK GD DLP ++D+EVR+EL+ +  +  V DMSPEE  AEGERKK+VGNGHFER AYKKALRAYT+AAN VA +EFPN  ++ FREAR+LRIDCGNNIA TC RLG+LEKAKEAAVGVLE DP N KALFRAGQVSSLQSNF EAR+AL++A ELNP SK +QAEL RL+AR+K+YK KR+A+ ETM RSL  GSKA
Sbjct:   74 VELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELVSILPSTPVPDMSPEEICAEGERKKLVGNGHFERTAYKKALRAYTAAANAVAELEFPNGDSDTFREARRLRIDCGNNIAMTCYRLGELEKAKEAAVGVLEEDPTNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELCRLAARIKSYKAKRQAMHETMGRSLFEGSKA 301          
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Match: A0A835YRT2_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT2_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.330e-32
Identity = 93/239 (38.91%), Postives = 132/239 (55.23%), Query Frame = 1
Query:   46 VELGLRSMRVGEQCIIRCESRFAYGPDGCPATKEGDADLPSNSDVEVRVELLGVQSTKSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSAANTVAGV-------------EFPNERANAFRE--ARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNAKALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSARVKAYKKKRRAVEETMARSLLA 717
            +EL LR M+ GE  +++C +RFA+G +            P NSDV + + L+ + + K+ A+MS ++ +     KK VGN H+    Y KALR Y +A +T                 E  +  ANA R   AR L I C NN+A   V+LG+L+ A +A V  LE+DPNN KAL+RAGQVSS Q NF EAR ALK+          V+AE + L  RV  Y  ++RA++E M  +L++
Sbjct:   71 IELALRHMKPGETRLVKCVARFAWGEEEQSVAHAP----PPNSDVVLELTLVRIATAKTPAEMSADQRLEHATFKKEVGNAHYAAKHYPKALRCYQAAMDTAQSAIQQQQGEAGSGSEEGSDADANAARNSAARALLIACANNVAMVHVQLGNLKGALDATVIALEMDPNNVKALYRAGQVSSRQGNFEEARAALKKXXXXXXXXAAVRAETRELQQRVADYHARQRAMQEKMGAALVS 305          
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Match: A0A7S2REJ1_9STRA (Peptidylprolyl isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REJ1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.690e-31
Identity = 85/226 (37.61%), Postives = 125/226 (55.31%), Query Frame = 1
Query:   46 VELGLRSMRVGEQCIIRCESRFAYGPDGCPATKEGDADLPSNSDVEVRVELLGVQSTKSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSAANTVAGVEFPNERA--NAFREARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNAKALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSARVKAYKKKRRAVEETMARSLLA 717
            VEL LR +  G++  + C  RFA+G  G PA  EG+  + +  DV+  V +  V     VA M+ +E + E + K+  GN  F    + +A R Y +A   + G E   + A  +       L +DCGNN+A   +RL D +KA++A + VL LDP N KAL+RAG  + L   + EARLAL RALEL+P++K V  EL+ L A+   Y++K   + + M   L A
Sbjct:   79 VELALRYLGPGDRARVCCAHRFAFGLSGRPAKHEGERAIAAEQDVDFIVAVSTVDPNTPVAGMALDERLREADCKRQSGNIFFLYEDWARATRCYAAALKALEGAENEEDAAEPDTAGHIHSLLVDCGNNLALAHLRLDDPKKAEDACIAVLSLDPANVKALYRAGVATKLMGRYDEARLALDRALELDPSNKAVVKELRNLQAKRLEYRQKDARIAQAMGAKLFA 304          
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Match: A0A7S1TZ54_9STRA (Peptidylprolyl isomerase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ54_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.050e-30
Identity = 91/230 (39.57%), Postives = 136/230 (59.13%), Query Frame = 1
Query:   46 VELGLRSMRVGEQCIIRCESRFAYGPDGCPATKEGDADLPSNSDVEVRVELLGVQS-TKSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSA----ANTVAGVEFPNERANAF-REARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNAKALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSARVKAYKKKRRAVEETMARSLLA 717
            +EL LR MRVGE+      SRFA+GPDG PA +EGDADLP ++DV + VEL  +++ T SVA    E  + E   +K  GN ++     ++A RA+ +A       +     P E    +  EA QL +DCG+N+A   V L +   A++AAVGVLE+DP++ KAL+RAG  +    +FA A LA+K AL  +P +  V+   + L AR   Y +K++A+ + + R +L+
Sbjct:   83 LELALRHMRVGEELEAYGISRFAWGPDGLPAIREGDADLPGDADVLLTVELHEIKAETASVA----EARLFEAGWRKRNGNDYYRHRDLRRAARAFAAALKLFTEPLPDDAIPEELRERYGAEATQLLVDCGSNLAAVQVALKNWPAARDAAVGVLEVDPSHVKALYRAGTAAMHLHDFAGATLAVKTALAADPDNAAVRRLARDLKARKAEYAEKKKAMGKRLGRDMLS 308          
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Match: A0A7S0TEL5_9STRA (Peptidylprolyl isomerase n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TEL5_9STRA)

HSP 1 Score: 110 bits (275), Expect = 6.160e-24
Identity = 73/225 (32.44%), Postives = 122/225 (54.22%), Query Frame = 1
Query:   46 VELGLRSMRVGEQCIIRCESRFAYGPDGCPATKE-GDADLPSNSDVEVRVELLGVQSTKSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSAANTVAGVEFPNERANAFREARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNAKALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSARVKAYKKKRRAVEETMARSLLA 717
            +ELGLR ++ G +C++R ESRFA+G  G PA+ E G   +P ++DVE R+E   +   ++   M+P + + +   KK +GN HF    ++KA   Y      +    F +E  +   EA  + +DCGNN+     ++ D  KA++A   VL + P + KAL+RA Q++   S + EA  AL  AL+  P +KE +   + L    + Y+ ++  +   M++ L A
Sbjct:   14 LELGLRQLQNGTKCVVRAESRFAFGDAGRPASAEQGTRAVPPDADVEWRIEAHRLWYKEADEAMTPRDQLVDARNKKELGNEHFHHENWRKAAANYQEILKGLNVWNF-DEGTDDREEAETIYVDCGNNLVFALTKMDDWLKAEKAVCDVLCVAPEHKKALYRATQIALHLSKWQEAHAALTIALDKWPRNKEFRDLYETLRDHKRKYRDRKAKMSAKMSKELFA 237          
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Match: UPI00094ECB4B (peptidyl-prolyl cis-trans isomerase FKBP8-like n=1 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094ECB4B)

HSP 1 Score: 113 bits (282), Expect = 8.480e-24
Identity = 77/208 (37.02%), Postives = 116/208 (55.77%), Query Frame = 1
Query:   37 SSAVELGLRSMRVGEQCIIRCESRFAYGPDGCPATKEGDADLPSNSDVEVRVELLGVQSTKSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSAAN--TVAGVEFPNERANAFREARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNAKALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSAR 654
            S A+E  + SMR GE  ++  +SR+AYGP G       + D+P+ + +  +++LL V       ++   + I  G RK+  GN HF+R  Y KA RAY  A +  T  G +   E     RE R  R+ C NN+A   ++L    +A  A+  VL L P+N KAL+RAG++ S  S++ EA   LK+AL+L PA++ + AEL +L  R
Sbjct:  163 SQALEECVVSMRRGEIALLLADSRYAYGPAG------REPDIPAGAPLLYQLQLLDVSDKADPLNLPLSDRIRAGNRKRERGNFHFQREEYGKAARAYRMALDVLTTCGGDAGEEDE---REVRHYRVKCLNNLAAALLKLERRREALRASRDVLALQPDNVKALYRAGKILSDASDYGEAAELLKKALKLEPAARAIHAELSKLVKR 361          
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Match: A0A8C5QIC3_9ANUR (Peptidylprolyl isomerase n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QIC3_9ANUR)

HSP 1 Score: 113 bits (282), Expect = 1.050e-23
Identity = 69/206 (33.50%), Postives = 117/206 (56.80%), Query Frame = 1
Query:   43 AVELGLRSMRVGEQCIIRCESRFAYGPDGCPATKEGDADLPSNSDVEVRVELLGVQSTKSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSAANTVAGVEFPNERANAFREARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNAKALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSARVK 660
            A+ELG+RSM++GE   +     +A+G  G       + D+PS++ +  +V L+ V+   S+  ++P + ++ G +K+  GN HFER  Y+ A+ +Y+ A + +         +    E R+LRI C NN+A T ++L   +    +   VLE++ NNAKAL+R G+V S +  +  A   LK+AL+L P +K + +EL +L  R K
Sbjct:  179 ALELGVRSMQLGEVAFLLTNGLYAFGLLG------RNPDIPSDASLLYKVTLIQVRDKPSLGILAPADRVSLGNQKRECGNFHFEREEYRSAMHSYSQALSILTPNSADPLSSEEEEEIRELRIKCLNNLAATQLKLHHFDDVINSCNAVLEMEANNAKALYRKGKVLSDRGEYETAMSVLKQALQLEPTTKAIHSELSKLVKRQK 378          
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Match: UPI000853FBB5 (peptidyl-prolyl cis-trans isomerase FKBP8-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000853FBB5)

HSP 1 Score: 109 bits (272), Expect = 2.520e-23
Identity = 70/206 (33.98%), Postives = 114/206 (55.34%), Query Frame = 1
Query:   43 AVELGLRSMRVGEQCIIRCESRFAYGPDGCPATKEGDADLPSNSDVEVRVELLGVQSTKSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSAANTVAGVEFPNERANAFREARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNAKALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSARVK 660
            A+ELG+RSM++GE   +     +A+G  G       D D+PS++ +   V L+ V+   S+  ++  + I+   +K+  GN HFER  Y+ A+ +Y+ A + +         +    E R+ RI C NN+A   ++L   +    +   VLE+D +NAKAL+R G+V S + ++ EA   LKRAL+L P +K + AEL +L  R K
Sbjct:   28 ALELGVRSMQLGEMAFLLTNGLYAFGLLG------RDPDIPSDASLIYNVTLIKVRDKPSLGVLTTSDRISLANQKRECGNFHFEREEYRSAMHSYSQALSILILPTAEPLSSEEDEEIREHRIKCLNNLAAAQLKLHHYDDVINSCNAVLEMDTDNAKALYRKGKVLSERGHYEEAMSVLKRALKLEPTTKAIHAELSKLVRRQK 227          
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Match: UPI001ABEC8D6 (peptidyl-prolyl cis-trans isomerase FKBP8-like n=1 Tax=Bufo bufo TaxID=8384 RepID=UPI001ABEC8D6)

HSP 1 Score: 111 bits (278), Expect = 3.590e-23
Identity = 71/206 (34.47%), Postives = 114/206 (55.34%), Query Frame = 1
Query:   43 AVELGLRSMRVGEQCIIRCESRFAYGPDGCPATKEGDADLPSNSDVEVRVELLGVQSTKSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSAANTVAGVEFPNERANAFREARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNAKALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSARVK 660
            A+ELG+RSM++GE   +     +A+G  G       D D+P+++ +  +V LL V+   S+  ++  + I    +K+  GN HFER  Y+ A+ +Y+ A   +         +    E R+ RI C NN+A T ++L   +    +   VLE+D +NAKAL+R G+V S + N+ EA   LK+AL+L P +K + AEL +L  R K
Sbjct:  179 ALELGVRSMQLGEVAFLLTNGLYAFGLLG------RDPDIPTDASLLYKVTLLEVRDKPSLIALTTADRITLANQKRECGNFHFEREEYRSAMHSYSQALTILTPNTADPLSSEEEEEIREHRIKCLNNLAATQLKLHHYDDVMNSCNAVLEMDTDNAKALYRKGKVLSERGNYEEAMSVLKQALKLEPTTKAIHAELSKLVRRQK 378          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17364.4860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW67_ECTSI4.700e-10372.81Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JHX5_9PHAE2.280e-10272.81Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CC... [more]
A0A835YRT2_9STRA1.330e-3238.91Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S2REJ1_9STRA1.690e-3137.61Peptidylprolyl isomerase n=1 Tax=Rhizochromulina m... [more]
A0A7S1TZ54_9STRA3.050e-3039.57Peptidylprolyl isomerase n=2 Tax=Phaeomonas parva ... [more]
A0A7S0TEL5_9STRA6.160e-2432.44Peptidylprolyl isomerase n=1 Tax=Chrysocystis frag... [more]
UPI00094ECB4B8.480e-2437.02peptidyl-prolyl cis-trans isomerase FKBP8-like n=1... [more]
A0A8C5QIC3_9ANUR1.050e-2333.50Peptidylprolyl isomerase n=1 Tax=Leptobrachium lei... [more]
UPI000853FBB52.520e-2333.98peptidyl-prolyl cis-trans isomerase FKBP8-like n=1... [more]
UPI001ABEC8D63.590e-2334.47peptidyl-prolyl cis-trans isomerase FKBP8-like n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17364contigL-elsbetiae_contig17364:1610..2947 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score316.6
Seed ortholog evalue1.2e-83
Seed eggNOG ortholog2880.D7FW67
Preferred nameFKBP8
KEGG koko:K09568,ko:K09571,ko:K09572,ko:K09574
KEGG Pathwayko04915,map04915
Hectar predicted targeting categoryother localisation
GOsGO:0000413,GO:0001654,GO:0001708,GO:0001932,GO:0001933,GO:0003002,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005783,GO:0005789,GO:0005829,GO:0006355,GO:0006357,GO:0006457,GO:0006464,GO:0006807,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007389,GO:0007399,GO:0007423,GO:0008144,GO:0008150,GO:0008152,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009892,GO:0009953,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010563,GO:0010605,GO:0010646,GO:0010647,GO:0010941,GO:0012505,GO:0016020,GO:0016021,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019904,GO:0021532,GO:0021904,GO:0021915,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030176,GO:0030510,GO:0030513,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031326,GO:0031399,GO:0031400,GO:0031967,GO:0031975,GO:0031984,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0035264,GO:0035295,GO:0035556,GO:0036211,GO:0040007,GO:0042175,GO:0042325,GO:0042326,GO:0042802,GO:0042981,GO:0043009,GO:0043010,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045165,GO:0045936,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051252,GO:0051716,GO:0060255,GO:0060429,GO:0060548,GO:0061077,GO:0065007,GO:0071704,GO:0080090,GO:0090092,GO:0090100,GO:0090287,GO:0097159,GO:0097718,GO:0098827,GO:0140096,GO:1901363,GO:1901564,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.FK506 binding
EggNOG OGsCOG0545@1,KOG0543@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009,ko03110
Exons1
Model size1338
Cds size894
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17364.4860.1prot_L-elsbetiae_contig17364.4860.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig17364 1676..2569 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815722.9190276-UTR-L-elsbetiae_contig17364:1609..16751622815722.9190276-UTR-L-elsbetiae_contig17364:1609..1675Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17364 1610..1675 +
1691683060.3615973-UTR-L-elsbetiae_contig17364:1609..16751691683060.3615973-UTR-L-elsbetiae_contig17364:1609..1675Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17364 1610..1675 +
1622815722.949182-UTR-L-elsbetiae_contig17364:2569..29471622815722.949182-UTR-L-elsbetiae_contig17364:2569..2947Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17364 2570..2947 +
1691683060.3851385-UTR-L-elsbetiae_contig17364:2569..29471691683060.3851385-UTR-L-elsbetiae_contig17364:2569..2947Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17364 2570..2947 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815722.9356983-CDS-L-elsbetiae_contig17364:1675..25691622815722.9356983-CDS-L-elsbetiae_contig17364:1675..2569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17364 1676..2569 +
1691683060.375078-CDS-L-elsbetiae_contig17364:1675..25691691683060.375078-CDS-L-elsbetiae_contig17364:1675..2569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17364 1676..2569 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig17364.4860.1

>prot_L-elsbetiae_contig17364.4860.1 ID=prot_L-elsbetiae_contig17364.4860.1|Name=mRNA_L-elsbetiae_contig17364.4860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp
MRVGEQCIIRCESRFAYGPDGCPATKEGDADLPSNSDVEVRVELLGVQST
KSVADMSPEETIAEGERKKVVGNGHFERAAYKKALRAYTSAANTVAGVEF
PNERANAFREARQLRIDCGNNIATTCVRLGDLEKAKEAAVGVLELDPNNA
KALFRAGQVSSLQSNFAEARLALKRALELNPASKEVQAELQRLSARVKAY
KKKRRAVEETMARSLLAGSKAESVDHEGTGDSPDVVGSAGEVFREEPVCL
ADKRKPAVLFGAHPYQGALRCIMAVLVALVVKRAVDGVSSTEGQTGA*
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mRNA from alignment at L-elsbetiae_contig17364:1610..2947+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig17364.4860.1 ID=mRNA_L-elsbetiae_contig17364.4860.1|Name=mRNA_L-elsbetiae_contig17364.4860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1338bp|location=Sequence derived from alignment at L-elsbetiae_contig17364:1610..2947+ (Laminarionema elsbetiae ELsaHSoW15)
TTCGCCTTGCCGCCTTGTTCTGTGCTTGCGGTGTTCTCGTCAGCTGTGGA GCTCGGACTCAGAAGCATGCGGGTAGGGGAGCAATGCATTATTCGATGCG AATCAAGATTTGCATACGGGCCCGACGGTTGCCCAGCGACGAAAGAAGGA GATGCAGACCTGCCTTCAAACTCAGATGTTGAGGTACGGGTTGAGCTCCT GGGCGTGCAGTCGACCAAGTCTGTGGCGGACATGAGTCCTGAGGAGACAA TCGCAGAAGGAGAACGCAAGAAGGTGGTTGGGAACGGGCATTTCGAGCGT GCAGCATACAAGAAGGCCTTGCGCGCGTACACATCGGCGGCTAACACCGT GGCCGGAGTGGAGTTCCCAAACGAGAGAGCGAACGCGTTCCGAGAGGCTC GTCAACTCCGAATTGACTGCGGCAATAATATCGCTACGACGTGTGTGCGC TTGGGCGACTTAGAAAAGGCCAAAGAGGCGGCTGTAGGCGTGCTAGAGCT TGACCCCAACAACGCAAAGGCCCTGTTTCGCGCTGGACAAGTGTCCTCTC TTCAGTCCAACTTCGCGGAAGCAAGACTGGCACTGAAAAGAGCCCTAGAG TTAAACCCAGCGTCGAAAGAAGTCCAAGCTGAGCTCCAGAGGTTGTCGGC CCGCGTAAAGGCGTACAAGAAGAAGCGCCGGGCTGTGGAAGAAACGATGG CCCGAAGTCTTTTGGCCGGATCCAAAGCAGAATCCGTTGACCATGAGGGC ACCGGCGATAGTCCCGATGTTGTTGGCTCAGCCGGGGAGGTATTTCGAGA AGAACCCGTTTGTCTTGCTGACAAGCGCAAACCAGCGGTCCTCTTCGGCG CACATCCATACCAAGGAGCTCTGAGATGTATCATGGCCGTTTTGGTTGCG TTGGTGGTGAAGCGTGCTGTAGATGGGGTTAGTTCTACTGAGGGTCAGAC CGGGGCTTGATGAAAGGTGATTGGCGATGTTGTGGAGCACTACTGTATTG CGATAGATTTTGAACATGTATTTTTGTGACTCTAGAGAAAGAGACAGGCA GATATTGGGAAGTATGAAGTGTTCCAATGCTCTTGAGCACGGAAAATGCT TCGGTAGAAGCACATGCTTATTCCTTCCTACCTTTGCTTAATAATTCGCC TGGGGTAGCCCAGCCTCGTCTAACCCCCCCATTATTTTTTCGAATGAAAA GACATCAAGAGTAACTGTGCAGAGATTGCCGGAGAAAAGCCGAGGGCACT GAAATGCCGAGTGCACAAACTTGCATTACTTACATTGTATAGTAGGGGCG GCCAGAAAACCGCAAAAGGACGAGAGCAGCCAAGGGCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig17364:1610..2947+

>mRNA_L-elsbetiae_contig17364.4860.1 ID=mRNA_L-elsbetiae_contig17364.4860.1|Name=mRNA_L-elsbetiae_contig17364.4860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1788bp|location=Sequence derived from alignment at L-elsbetiae_contig17364:1610..2947+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGGGTAGGGGAGCAATGCATTATTCGATGCGAATCAAGATTTGCATA
CGGGCCCGACGGTTGCCCAGCGACGAAAGAAGGAGATGCAGACCTGCCTT
CAAACTCAGATGTTGAGGTACGGGTTGAGCTCCTGGGCGTGCAGTCGACC
AAGTCTGTGGCGGACATGAGTCCTGAGGAGACAATCGCAGAAGGAGAACG
CAAGAAGGTGGTTGGGAACGGGCATTTCGAGCGTGCAGCATACAAGAAGG
CCTTGCGCGCGTACACATCGGCGGCTAACACCGTGGCCGGAGTGGAGTTC
CCAAACGAGAGAGCGAACGCGTTCCGAGAGGCTCGTCAACTCCGAATTGA
CTGCGGCAATAATATCGCTACGACGTGTGTGCGCTTGGGCGACTTAGAAA
AGGCCAAAGAGGCGGCTGTAGGCGTGCTAGAGCTTGACCCCAACAACGCA
AAGGCCCTGTTTCGCGCTGGACAAGTGTCCTCTCTTCAGTCCAACTTCGC
GGAAGCAAGACTGGCACTGAAAAGAGCCCTAGAGTTAAACCCAGCGTCGA
AAGAAGTCCAAGCTGAGCTCCAGAGGTTGTCGGCCCGCGTAAAGGCGTAC
AAGAAGAAGCGCCGGGCTGTGGAAGAAACGATGGCCCGAAGTCTTTTGGC
CGGATCCAAAGCAGAATCCGTTGACCATGAGGGCACCGGCGATAGTCCCG
ATGTTGTTGGCTCAGCCGGGGAGGTATTTCGAGAAGAACCCGTTTGTCTT
GCTGACAAGCGCAAACCAGCGGTCCTCTTCGGCGCACATCCATACCAAGG
AGCTCTGAGATGTATCATGGCCGTTTTGGTTGCGTTGGTGGTGAAGCGTG
CTGTAGATGGGGTTAGTTCTACTGAGGGTCAGACCGGGGCTTGAATGCGG
GTAGGGGAGCAATGCATTATTCGATGCGAATCAAGATTTGCATACGGGCC
CGACGGTTGCCCAGCGACGAAAGAAGGAGATGCAGACCTGCCTTCAAACT
CAGATGTTGAGGTACGGGTTGAGCTCCTGGGCGTGCAGTCGACCAAGTCT
GTGGCGGACATGAGTCCTGAGGAGACAATCGCAGAAGGAGAACGCAAGAA
GGTGGTTGGGAACGGGCATTTCGAGCGTGCAGCATACAAGAAGGCCTTGC
GCGCGTACACATCGGCGGCTAACACCGTGGCCGGAGTGGAGTTCCCAAAC
GAGAGAGCGAACGCGTTCCGAGAGGCTCGTCAACTCCGAATTGACTGCGG
CAATAATATCGCTACGACGTGTGTGCGCTTGGGCGACTTAGAAAAGGCCA
AAGAGGCGGCTGTAGGCGTGCTAGAGCTTGACCCCAACAACGCAAAGGCC
CTGTTTCGCGCTGGACAAGTGTCCTCTCTTCAGTCCAACTTCGCGGAAGC
AAGACTGGCACTGAAAAGAGCCCTAGAGTTAAACCCAGCGTCGAAAGAAG
TCCAAGCTGAGCTCCAGAGGTTGTCGGCCCGCGTAAAGGCGTACAAGAAG
AAGCGCCGGGCTGTGGAAGAAACGATGGCCCGAAGTCTTTTGGCCGGATC
CAAAGCAGAATCCGTTGACCATGAGGGCACCGGCGATAGTCCCGATGTTG
TTGGCTCAGCCGGGGAGGTATTTCGAGAAGAACCCGTTTGTCTTGCTGAC
AAGCGCAAACCAGCGGTCCTCTTCGGCGCACATCCATACCAAGGAGCTCT
GAGATGTATCATGGCCGTTTTGGTTGCGTTGGTGGTGAAGCGTGCTGTAG
ATGGGGTTAGTTCTACTGAGGGTCAGACCGGGGCTTGA
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