mRNA_L-elsbetiae_contig17291.4828.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Match: D7FQJ6_ECTSI (Early-responsive to dehydration protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQJ6_ECTSI) HSP 1 Score: 359 bits (921), Expect = 9.310e-114 Identity = 186/217 (85.71%), Postives = 197/217 (90.78%), Query Frame = 1 Query: 1 ARKVFALFAPYGLLVLIPANLHESSGADGGQHESSINNFNRLSMSNLQHYDPRMWLHALGMYLLSAIAMYFLVVEY--YTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSVLRRLIRERQAVLENLGRGLAEKGVRGEEQYHYTGGWCSRRKRVNTVGFCSTQLDRLNLAIATEQDQRRPPRRRRFGWGPTLP 645 A KVFALFAPYGLLVLIP N+ E+ +D Q +++IN FNRLSMSN+QHY+P MWLHALG+YLLSA+AMYFLVVEY YTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLS LR LIRERQAVLENLG+GLAEKGVRGEEQYHYTG C RRKRVNTVGFCSTQLDRLNLAIATEQDQR P RRRFGWGPTLP Sbjct: 135 AFKVFALFAPYGLLVLIPVNVMETP-SDSNQAQTNINTFNRLSMSNVQHYNPCMWLHALGIYLLSALAMYFLVVEYRYYTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSRLRGLIRERQAVLENLGKGLAEKGVRGEEQYHYTGVLCYRRKRVNTVGFCSTQLDRLNLAIATEQDQRIPRSRRRFGWGPTLP 350
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Match: A0A7S3UXJ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXJ8_HETAK) HSP 1 Score: 132 bits (332), Expect = 3.350e-33 Identity = 82/200 (41.00%), Postives = 117/200 (58.50%), Query Frame = 1 Query: 7 KVFALFAPYGLLVLIPANLHESSGADGGQHESSINNFNRLSMSNLQHYDPRMWLHALGMYLLSAIAMYFLVVEY--YTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSVLRRLIRERQAVLENLGRGLAEKGVRGEEQYHYTGGWCSRRKRVNTVGFCSTQLDRLNLAIATEQDQR 600 ++F +FA YGL VLIP N S+G E S+ FN L++SN+ MW H +GMYLL+AI M+ LVVE+ YT LRH FLRR+ A R+++V+ VPR +RS + L YF LYP +VV V + Q L L RLI +R++VL L + + G+ Y + G W + + V + +L LN ++ EQ +R Sbjct: 104 RIFGIFAVYGLCVLIPVNALGSNG------EQSL--FNTLTLSNIADGSNTMWFHVVGMYLLTAITMWQLVVEFRTYTRLRHEFLRRRRALFRSVLVEEVPRPLRSQATLRAYFEKLYPGQVVEVFLCQRLEALTRLIEQRESVLAKLEHAMVHQQRFGKTTYVWRG-WGHKEEAVT---YWQARLHELNDEVSREQARR 291
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Match: A0A835Z3W6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W6_9STRA) HSP 1 Score: 124 bits (310), Expect = 5.010e-29 Identity = 77/208 (37.02%), Postives = 117/208 (56.25%), Query Frame = 1 Query: 1 ARKVFALFAPYGLLVLIPANLHESSGADGGQHESSINNFNRLSMSNLQHYDPRMWLHALGMYLLSAIAMYFLVVEY--YTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSVLRRLIRERQAVLENLGRGL---AEKGVRGEEQYHYTG---GWCSRRKRVNTVGFCSTQLDRLNLAIATEQDQR 600 A K+ A A Y L V++P N+ + D E+S N+F+ LSMSN+ +W+HA+G L++ A +FL E+ YT LRH +L+ ++ H+RTI+++ VP EMR ++++ YFN LYP + +V Q+L LRRL+ +R++ L L R L A E +TG C+ +RV + +LD LN AI EQ R Sbjct: 5 AAKISAATAVYALCVVLPVNVVGDNLTD---EEASANSFSLLSMSNVAPGSATLWVHAVGTLLMTIAAFFFLNGEFTTYTRLRHAYLKMRAPHMRTILLEDVPAEMRGAAQIYIYFNHLYPNSIASVACMQDLRPLRRLLEQRESTLARLERLLLRRARAAPNAAEPTMWTGPALAPCASCERVEAASWLQQRLDALNAAIGVEQSLR 209
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Match: A0A836CHQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ4_9STRA) HSP 1 Score: 107 bits (266), Expect = 4.050e-23 Identity = 82/233 (35.19%), Postives = 106/233 (45.49%), Query Frame = 1 Query: 1 ARKVFALFAPYGLLVLIPANLHESSGADGGQHES-----SINNFNRLSMSNLQHYDPR-----------------------------MWLHALGMYLLSAIAMYFLVVEY--YTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSVLRRLIRERQAVLENLGRGLAEKGVRGEEQYHYTGGWCSRRKRVNTVGFCSTQLDRLNLAIATEQ 591 A KVF +FA YGL V+IPAN+ GGQ S SIN+FN+LSMSN+QHYD + MW+HA G+YLL+A+ YFL VE+ Y LRH +L R++ HLRTIVV+ ERQ VL L R +A K + G E +H G C VN++ QL LN+ I++EQ Sbjct: 141 AFKVFGIFALYGLAVIIPANIA------GGQRNSFRVQTSINSFNQLSMSNIQHYDSKASALCIRRTSALKLAIVTEHCSSRLAELQMWVHAFGVYLLTALVQYFLYVEFRFYKQLRHEYLMRRAPHLRTIVVE-----------------------------------------ERQRVLARLERLMALKRITGAEPHHRLG-VCGFGPNVNSIQVYKQQLTTLNMTISSEQ 325
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Match: A0A7S3NIB5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIB5_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.350e-22 Identity = 68/210 (32.38%), Postives = 114/210 (54.29%), Query Frame = 1 Query: 1 ARKVFALFAPYGLLVLIPANLH----ESSGADGGQHESS-----------INNFNRLSMSNLQHYDPRMWLHALGMYLLSAIAMYFLVVE--YYTNLRHRFLRRKS-AHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSVLRRLIRERQAVLENLGRGLAEKGVRGEEQYHYTGGWCSRRKRVNTVGFCSTQLDRLNLA 576 A K+FA FAPY +VL+P N ++ D +ES+ +N+FNRLSM+++ D RMW H G+Y+L+ +A+ +L E +YT +RHRFL +++ + RT++V+ +P E+RS +L YF LYP++V +N+ +L L R+A A + R EE++H R+++ + TQ +++ A Sbjct: 114 ATKIFAAFAPYAFVVLLPVNASVFFLTNANGDSVLNESTEEEKTILADPTVNSFNRLSMASMPAKDSRMWFHCFGVYILTGLALRYLQREAKWYTQIRHRFLTQQNDSRHRTVIVRHIPVELRSSQRLCDYFAKLYPDKVCGALCFRNVEILENLEARREAT--------AARAERLEERFH--------REKLRANEYVYTQGKKMSCA 307
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Match: A0A1E7ERH2_9STRA (DUF221-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERH2_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 5.450e-18 Identity = 53/155 (34.19%), Postives = 86/155 (55.48%), Query Frame = 1 Query: 1 ARKVFALFAPYGLLVLIPANLHESSGADGGQHESSI-----NNFNRLSMSNLQHYDPRMWLHALGMYLLSAIAMYFLVVEYYT--NLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSVLRRLIRERQAVLENL 444 A + + + LVL+P N GA+ + + +F R +M+N+ PR+W+H YLL+AI + L+VEY T ++RH +L + HLRT++V +PR +RS +K+ YF +YP V +V + QNL L L+ +R +L N+ Sbjct: 14 ALRCIVKMSIFSFLVLLPLNYTGGGGANAVDIQGYVVSLFVTDFLRFTMANVAGGSPRLWVHCFAAYLLTAIVVRELLVEYETFNSIRHCYLLSREPHLRTVLVTNIPRHLRSPNKISAYFTHVYPNAVKHVVMCQNLVYLEALVAKRTTLLANI 168
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Match: UPI000A2A5129 (CSC1-like protein At1g32090 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A5129) HSP 1 Score: 82.8 bits (203), Expect = 9.180e-15 Identity = 51/194 (26.29%), Postives = 101/194 (52.06%), Query Frame = 1 Query: 19 LFAPYGLLVLIPANLHESSGADGGQHESSINNFNRLSMSNLQHYDPRMWLHALGMYLLSAIAMYFLVVEY--YTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSVLRRLIRERQAVLENLGRGLAEKGVRGEEQYHYTGGWCSRRKRVNTVGFCSTQLDRLNLAIATEQD 594 + PYG++VLIP ++H G D + ++L++SN++ Y P++W H + +Y +A+ Y L E+ Y R ++L + H ++V+ +P +++S+ L TY L+P E+ ++H+ +NL ++L+ + + L + +GE H T C K V+++ T+L + + E+D Sbjct: 120 IILPYGIIVLIPLHVH--GGLD-------LEKLDQLTLSNVKAYSPKVWAHLIAVYAYTAVFCYLLYREWKIYIEYRQKWLAKGLKHHYAVLVRDLPTKLQSNESLKTYXEQLFPAELEDLHVVENLDEWQKLVVQHDQFVWKLEKAKFIHEKKGERPMHKTK-LCGGEK-VDSISTYETELKNCHDNLVKEKD 302
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Match: A0A7S2W8T3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8T3_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 6.180e-14 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 13 FALFAPYGLLVLIPANLHESSGADGGQHESSINNFNRLSMSNLQHYDPRMWLHALGMYLLSAIAMYFLVVEY--YTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYP 357 F+ FA G +++P NL S E+ +N F + +MSN+ D R+W+H + LS + + FL E YT LRH +L +S L TI+V+ +PR++RS +L YF+ +YP Sbjct: 1 FSSFAVVGFGIVLPVNLSCSYWGSQTSIET-LNTFMQCTMSNVPAQDRRLWVHVAASFFLSMLTLRFLAAECESYTKLRHVYLGTQSVALHTILVERIPRQLRSQIRLAAYFSRMYP 116
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Match: A0A7S2V8C1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V8C1_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.350e-12 Identity = 51/193 (26.42%), Postives = 95/193 (49.22%), Query Frame = 1 Query: 16 ALFAPYGLLVLIPANLHESSGADGGQHESSINNFNRLSMSNLQHYDPRMWLHALGMYLLSAIAMYFLVVEY--YTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEE-VVNVHIPQNLSVLRRLIRERQAVLENLGRGLAEKGVRGEEQYHYTGGWCSRRKRVNTVGFCSTQLDRLNLAIAT 585 +L + L L+P L + D + ES + R +++++ PR++ + Y+L MY+ + E+ YT +RH+FLRR A TI + +P+E +S L +F + ++ V+ +P + L RL+ +R A L L +A G +G H T + V+++ + +LD N +++T Sbjct: 123 SLVGIFNALWLLPVYL---TAEDSSETESVSDRVVRTTVAHVPSSSPRLYATVIAAYILFGYTMYYTLEEFEWYTEMRHKFLRRPRARHHTIFCRNIPKEYQSSESLSEFFKQCFSDDAVLEATVPLQIPNLSRLVAQRSATLAKLEHAVAILGRKGVRPRHIT----VSGRNVDSIDHFTRRLDEQNHSVST 308
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Match: UPI001CF0EC2B (CSC1-like protein ERD4 isoform X1 n=4 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF0EC2B) HSP 1 Score: 73.6 bits (179), Expect = 1.370e-11 Identity = 41/148 (27.70%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 7 KVFALFAPYGLLVLIPANLHESSGADGGQHESSINNFNRLSMSNLQHYDPRMWLHALGMYLLSAIAMYFLVVEY--YTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSVLRRLIRERQAVLENL 444 K+ L PYG+ VL+P N + + G ++LSMSNL R+W H + ++ + I Y L +E+ Y R +L +H ++V+ VPR+ +++ + +Y L+P ++ +V + ++LS+ +RLI + +++ L Sbjct: 126 KISFLIFPYGIAVLLPLNCYGIADLSG---------LDKLSMSNLGQRSERLWAHLVAAWVYTLIICYLLYLEWKIYIMYRQEYLSNGKSHQYAVLVRDVPRKFQNEQSMKSYIEDLFPNQIEDVIVIEDLSIWQRLIEKHDSLVLKL 264 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17291.4828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17291.4828.1 >prot_L-elsbetiae_contig17291.4828.1 ID=prot_L-elsbetiae_contig17291.4828.1|Name=mRNA_L-elsbetiae_contig17291.4828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp ARKVFALFAPYGLLVLIPANLHESSGADGGQHESSINNFNRLSMSNLQHYback to top mRNA from alignment at L-elsbetiae_contig17291:191..3047- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17291.4828.1 ID=mRNA_L-elsbetiae_contig17291.4828.1|Name=mRNA_L-elsbetiae_contig17291.4828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2857bp|location=Sequence derived from alignment at L-elsbetiae_contig17291:191..3047- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17291:191..3047- >mRNA_L-elsbetiae_contig17291.4828.1 ID=mRNA_L-elsbetiae_contig17291.4828.1|Name=mRNA_L-elsbetiae_contig17291.4828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig17291:191..3047- (Laminarionema elsbetiae ELsaHSoW15)back to top |