mRNA_L-elsbetiae_contig1727.4815.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1727.4815.1
Unique NamemRNA_L-elsbetiae_contig1727.4815.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Match: D7G4M9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M9_ECTSI)

HSP 1 Score: 436 bits (1122), Expect = 2.680e-152
Identity = 235/292 (80.48%), Postives = 246/292 (84.25%), Query Frame = 1 
Query:    1 MVKVVHFCVAAAAAADVCTAFVAPVGRTAAGLAASQQARVSVSARSDTFHQQRRSTGHGSSRRR---QHLGLQMQSDGPSQWAGGGINVSGEAPFEIRGFSLANAAALVGLAITCASFFEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGLVLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGVEPTPKVAA 867
            MV+V HFCV AAAAADVCTAFVAPVG+ A                                      Q L LQMQSDGPSQWAGGGINVSGEAPFEIRGFSLANAAAL GLAITCASF+EYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATET++SIKSDVTRHRYGDEAHLDTTVKFLGLV+PQSDYPQLQY+SQTIEPNGELGF+MVFQSKMTPFKRWVEPER++KYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPG +PTPKV A
Sbjct:    1 MVRVGHFCVVAAAAADVCTAFVAPVGQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLALQMQSDGPSQWAGGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTA 292
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BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Match: A0A835YHW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW7_9STRA)

HSP 1 Score: 287 bits (734), Expect = 1.990e-93
Identity = 168/289 (58.13%), Postives = 199/289 (68.86%), Query Frame = 1 
Query:   28 AAAAAADVCTAFVAPVGRTAAGLAASQQARVSVSARSDTFHQQRRSTGHGSSRRRQHLGLQMQSD------GPSQWAGGGINVSGEAPFEIRGFSLANAAALVGLAITCASFFEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGLVLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGV---EPTPKVAA 867
            AAA AA  C+AFV   G      A  Q   V++          RR       RR Q   +++ +D      GP+Q + GGINVSGEAPFEIRGFSL NA  + G+ IT ASF EYF++GGAG LSG+GFVYGIP+ALIGLALKYAEL P  + +TP A ALFEEKATET++ IK DVTRHRYGDEAHLD+TVK LGLVLPQSDYPQLQ L + + PNGEL FSM+F S  TPFK WV+P R++KY  FFGPGV A V KV ++ +LVAIKLTT+ P     EP+   AA
Sbjct:    9 AAALAAVPCSAFVPSSGAALVPRARLQHVGVAL----------RRGVAVSQQRRHQCFAMKVSNDFDDSETGPAQISAGGINVSGEAPFEIRGFSLGNAFLIGGVVITTASFAEYFTSGGAG-LSGLGFVYGIPVALIGLALKYAELAPVGVSSTPAAAALFEEKATETMRKIKKDVTRHRYGDEAHLDSTVKALGLVLPQSDYPQLQGLKEEVAPNGELAFSMIFSSPETPFKMWVDPARVRKYTTFFGPGVTASVEKVSSEARLVAIKLTTVNPDAPTEEPSAAAAA 286
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BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Match: A0A7S2V4E2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4E2_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.820e-89
Identity = 144/212 (67.92%), Postives = 172/212 (81.13%), Query Frame = 1 
Query:  244 GGINVSGEAPFEIRGFSLANAAALVGLAITCASFFEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGLVLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVAFFGPGVDAEVIKVDAQEKLVAIKLTT----LPPGVEPTPKVAA 867
            GGIN+SGE PFEIRGFSL +A   VG+A+T  SF E+F + G+ GLSGIGFVYGIPIAL+GL+LKYAEL P P++TTPEAEALFEEKATET+K IKSDVTRHRYGDEAHL++TVK LGLV+PQS+YPQLQ+L + +E +GE  FSMVFQSK TPFK W EP +I K+  FFGPGV+AEV+KV+  E+LVAIKLTT    +PP    T +  A
Sbjct:    8 GGINLSGEPPFEIRGFSLGDAFLGVGVAVTAISFTEFFMSAGSEGLSGIGFVYGIPIALVGLSLKYAELAPVPVRTTPEAEALFEEKATETIKKIKSDVTRHRYGDEAHLESTVKALGLVMPQSEYPQLQWLDEGVE-DGEYTFSMVFQSKETPFKVWNEPAKIPKFETFFGPGVNAEVVKVNGAERLVAIKLTTGEKKVPPAATETEEAPA 218
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BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Match: A0A7R9UF83_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF83_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.270e-83
Identity = 128/200 (64.00%), Postives = 158/200 (79.00%), Query Frame = 1 
Query:  229 SQWAGGGINVSGEAPFEIRGFSLANAAALVGLAITCASFFEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGLVLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVAFFGPGVDAEVIKVDAQEKLVAIKLTT 828
            +Q A GGIN SG+ PFEIRGFSLA      G  +T  SF EYFS GG  G+SG+GFVYGIP+ LIGL+LKYAE+PP  + TTP A+  FE+KATET+K IK DVTRHRYGD+AHLD+T+K LGL LPQ D+P+L+YL Q + PNGEL FSMVF+S  TP++ W EP+RI++Y  FFGPGV+AEV K+ ++E+LVAIKLTT
Sbjct:   50 AQVAAGGINTSGKPPFEIRGFSLATLFLGGGFLLTVGSFAEYFSEGGGSGVSGLGFVYGIPVLLIGLSLKYAEIPPVEVVTTPAADDAFEKKATETIKQIKQDVTRHRYGDDAHLDSTLKALGLQLPQKDFPELEYLKQDVAPNGELAFSMVFRSMETPYRMWAEPDRIKRYETFFGPGVNAEVEKISSEERLVAIKLTT 249
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BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Match: A0A7S1U5M2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5M2_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.130e-82
Identity = 134/217 (61.75%), Postives = 162/217 (74.65%), Query Frame = 1 
Query:  232 QWAGGGINVSGEAPFEIRGFSLANAAALVGLAITCASFFEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGLVLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVAFFGPGVDAEVIKVDAQEKLVAIKLTT-----LPPGVEPTPKVAA 867
            Q A GGIN SGE PFEIRGFSLA +  + G  +T ASF EYF+ GG  GL GIGFVYGIP+ LIGL+LKYAEL P  + +TP+ EA FE KATETLK IK DVTRHRYGD+AHLD+T+K LGL LPQ ++P L+YL +     GEL FSMVF+S  TP+K W E +R+++Y  FFGPG++AEV+KV+A+E+LVAIKLTT      P   EP PK AA
Sbjct:   55 QVAAGGINTSGEPPFEIRGFSLATSFLVGGFVLTVASFGEYFAEGGGAGLGGIGFVYGIPVLLIGLSLKYAELAPVEVVSTPQGEAAFEAKATETLKKIKQDVTRHRYGDDAHLDSTLKSLGLQLPQKEFPTLEYLQEETTNEGELAFSMVFRSPETPYKIWAEEDRVKRYETFFGPGLNAEVVKVNAEERLVAIKLTTGEKPAEPKAAEPAPKEAA 271
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BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Match: A0A4D9DHB4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHB4_9STRA)

HSP 1 Score: 240 bits (612), Expect = 4.380e-75
Identity = 124/196 (63.27%), Postives = 154/196 (78.57%), Query Frame = 1 
Query:  244 GGINVSG-EAPFEIRGFSLANAAALVGLAITCASFFEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGLVLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVAFFGPGVDAEVIKVDAQEKLVAIKLTT 828
            GG N+ G + PFE+RGFSLA  A  VG  IT  S  EY  + G+ GLSG+GFVYGIPI LIGL+L+YA+L P P+Q+TPEA+ LFE+K+T T++ IK DVTRHRYGD+AHLDTTV+ LGLV+P  ++PQLQYL+Q +E NGEL F+MVF+S  TP++ WVEPERI +Y  FFGPGV A V KVDA+ +LVAIKL T
Sbjct:   69 GGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVQSTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVE-NGELAFTMVFKSDDTPYRLWVEPERISRYETFFGPGVWATVEKVDAERRLVAIKLVT 263
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BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Match: A0A7S1ZC13_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZC13_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.410e-74
Identity = 121/198 (61.11%), Postives = 148/198 (74.75%), Query Frame = 1 
Query:  241 GGGINVSGEAPFEIRGFSLANAAALVGLAITCASFFEYFSTGGAGGL--SGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGLVLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVAFFGPGVDAEVIKVDAQEKLVAIKLTT 828
            G G+N +GE PFEIRGFSL N   L G+ +T ASF EY S  G  GL  SG+GFVYGIPI L G ALKYAE+ P P  +TP+ E +FE KAT+ ++ IK DVTRHRYGDEAHLDTTVK LGLV+P  DYPQLQ L + +  +GEL F+MV+QS  TPFK W + +R +KY  FFGPGV AEV+K+DA+++LV I+LTT
Sbjct:   69 GAGVNNAGEPPFEIRGFSLGNLVILAGVVVTFASFAEYLSESGGDGLNVSGLGFVYGIPIFLAGAALKYAEIEPVPCYSTPDGERIFESKATDIIQKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKDYPQLQELREEMTEDGELAFTMVWQSYDTPFKLWADEKRRKKYETFFGPGVGAEVVKIDAEQRLVGIRLTT 266
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BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Match: A0A448ZRR3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRR3_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.280e-73
Identity = 125/211 (59.24%), Postives = 152/211 (72.04%), Query Frame = 1 
Query:  241 GGGINVSGEAPFEIRGFSLANAAALVGLAITCASFFEYFSTGGAGGL--SGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGLVLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGVEPTPKVAA 867
            G G+N +GE PFEIRGFSL N     G+ IT  SF EY S  GA GL  SG+GFVYGIP+ L G ALKYAE+ P P  ++P AE +F++KATE +  IK DVTRHRYGDEAHLDTTVK LGLV+P  DYPQL  L + +E +GEL F+MV+QS  TP+K W +  R++KY  FFGPGV AEV+K+DA+++LV IKLTT       TP VAA
Sbjct:    4 GAGVNNAGEPPFEIRGFSLGNLVIFSGIMITILSFAEYLSDSGADGLNVSGLGFVYGIPVFLAGAALKYAEIEPVPCISSPAAERIFDDKATEIIAKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKDYPQLMELREDVE-DGELTFTMVWQSIDTPYKMWADERRVKKYETFFGPGVAAEVVKIDAEQRLVGIKLTTT----SSTPAVAA 209
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BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Match: A0A7S2UH94_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UH94_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.410e-73
Identity = 125/207 (60.39%), Postives = 150/207 (72.46%), Query Frame = 1 
Query:  241 GGGINVSGEAPFEIRGFSLANAAALVGLAITCASFFEYFSTG-GAGGL--SGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGLVLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGVEPT 852
            G G+N +GE PFEIRGFSL N    +G+AIT  SF EY   G G GGL  SG+GFVYGIP+ L G ALKYAE+ P PL ++ E++ LFE K TE +  IK DVTRHRYGDEAHLDTTVK LGLV+P   YPQLQ L Q   P+GEL F+MV+QS  TP+K W +  R++KY  FFGPGV AEV+K+DA+++LV IKLTT P    PT
Sbjct:   82 GAGVNNAGEPPFEIRGFSLGNLVIALGVAITVLSFTEYLGDGSGDGGLGVSGLGFVYGIPVFLAGAALKYAEIEPVPLFSSDESQTLFEAKKTEVMDKIKKDVTRHRYGDEAHLDTTVKRLGLVVPGKAYPQLQELRQETTPDGELAFTMVWQSLDTPYKMWADERRVKKYDTFFGPGVTAEVLKIDAEQRLVGIKLTTGPKPTTPT 288
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BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Match: A0A8J9X6Z0_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X6Z0_PHATR)

HSP 1 Score: 234 bits (597), Expect = 1.640e-73
Identity = 121/198 (61.11%), Postives = 146/198 (73.74%), Query Frame = 1 
Query:  241 GGGINVSGEAPFEIRGFSLANAAALVGLAITCASFFEYFSTGGAGGL--SGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGLVLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVAFFGPGVDAEVIKVDAQEKLVAIKLTT 828
            G G+N +GE PFEIRGFSL N     G+ IT ASF EY S  G  GL  SG+GFVYGIP+ L G ALKYAE+ P P+ TTP AE +F+ KAT+T+  IK DVTRHRYGDEAHLDTTVK LGLV+P   YPQLQ L Q    +GEL F+MV+QS  TP+K W +P R+ KY  FFGPGV A+V+K+DA+++LV I+LTT
Sbjct:   12 GAGVNNAGEPPFEIRGFSLGNLVVGAGILITFASFAEYLSESGGDGLNVSGLGFVYGIPVFLAGAALKYAEINPVPVATTPAAERVFDRKATDTILKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLQELRQDEVNDGELAFTMVWQSVDTPYKMWADPRRVLKYEKFFGPGVYADVVKIDAEQRLVGIRLTT 209
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1727.4815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M9_ECTSI2.680e-15280.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHW7_9STRA1.990e-9358.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V4E2_9STRA1.820e-8967.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9UF83_9STRA1.270e-8364.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1U5M2_9STRA1.130e-8261.75Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A4D9DHB4_9STRA4.380e-7563.27Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1ZC13_9STRA1.410e-7461.11Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A448ZRR3_9STRA1.280e-7359.24Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2UH94_9STRA1.410e-7360.39Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A8J9X6Z0_PHATR1.640e-7361.11Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1727contigL-elsbetiae_contig1727:4651..10179 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score439.5
Seed ortholog evalue1.2e-120
Seed eggNOG ortholog2880.D7G4M9
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Protein of unknown function (DUF2854)
EggNOG OGs28IHE@1,2QQU9@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF2854
Ec32 orthologEc-00_007720.1
Exons6
Model size867
Cds size867
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1727.4815.1prot_L-elsbetiae_contig1727.4815.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1727 4651..10179 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815719.592369-CDS-L-elsbetiae_contig1727:4650..48601622815719.592369-CDS-L-elsbetiae_contig1727:4650..4860Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 4651..4860 +
1691683058.3406515-CDS-L-elsbetiae_contig1727:4650..48601691683058.3406515-CDS-L-elsbetiae_contig1727:4650..4860Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 4651..4860 +
1622815719.6032407-CDS-L-elsbetiae_contig1727:5264..54921622815719.6032407-CDS-L-elsbetiae_contig1727:5264..5492Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 5265..5492 +
1691683058.3506312-CDS-L-elsbetiae_contig1727:5264..54921691683058.3506312-CDS-L-elsbetiae_contig1727:5264..5492Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 5265..5492 +
1622815719.6133814-CDS-L-elsbetiae_contig1727:6287..63621622815719.6133814-CDS-L-elsbetiae_contig1727:6287..6362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 6288..6362 +
1691683058.3590646-CDS-L-elsbetiae_contig1727:6287..63621691683058.3590646-CDS-L-elsbetiae_contig1727:6287..6362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 6288..6362 +
1622815719.623186-CDS-L-elsbetiae_contig1727:7070..72021622815719.623186-CDS-L-elsbetiae_contig1727:7070..7202Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 7071..7202 +
1691683058.3679905-CDS-L-elsbetiae_contig1727:7070..72021691683058.3679905-CDS-L-elsbetiae_contig1727:7070..7202Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 7071..7202 +
1622815719.6358552-CDS-L-elsbetiae_contig1727:8436..85681622815719.6358552-CDS-L-elsbetiae_contig1727:8436..8568Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 8437..8568 +
1691683058.3765671-CDS-L-elsbetiae_contig1727:8436..85681691683058.3765671-CDS-L-elsbetiae_contig1727:8436..8568Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 8437..8568 +
1622815719.649611-CDS-L-elsbetiae_contig1727:10089..101791622815719.649611-CDS-L-elsbetiae_contig1727:10089..10179Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 10090..10179 +
1691683058.3866715-CDS-L-elsbetiae_contig1727:10089..101791691683058.3866715-CDS-L-elsbetiae_contig1727:10089..10179Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1727 10090..10179 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1727.4815.1

>prot_L-elsbetiae_contig1727.4815.1 ID=prot_L-elsbetiae_contig1727.4815.1|Name=mRNA_L-elsbetiae_contig1727.4815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp
MVKVVHFCVAAAAAADVCTAFVAPVGRTAAGLAASQQARVSVSARSDTFH
QQRRSTGHGSSRRRQHLGLQMQSDGPSQWAGGGINVSGEAPFEIRGFSLA
NAAALVGLAITCASFFEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAEL
PPAPLQTTPEAEALFEEKATETLKSIKSDVTRHRYGDEAHLDTTVKFLGL
VLPQSDYPQLQYLSQTIEPNGELGFSMVFQSKMTPFKRWVEPERIQKYVA
FFGPGVDAEVIKVDAQEKLVAIKLTTLPPGVEPTPKVAA
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mRNA from alignment at L-elsbetiae_contig1727:4651..10179+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1727.4815.1 ID=mRNA_L-elsbetiae_contig1727.4815.1|Name=mRNA_L-elsbetiae_contig1727.4815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5529bp|location=Sequence derived from alignment at L-elsbetiae_contig1727:4651..10179+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGAAGGTCGTTCACTTCTGCGTGGCGGCTGCGGCCGCAGCCGACGT
ATGCACGGCTTTCGTCGCCCCCGTAGGGAGGACGGCGGCGGGACTGGCAG
CTTCCCAACAAGCTCGAGTGTCAGTGTCGGCAAGATCCGACACGTTCCAC
CAGCAGCGCCGCAGCACCGGCCATGGCTCGTCCCGCCGCCGGCAGCACCT
TGGCCTACAGGTTTGTTGGGTAGGATGGGGTGCTGGTGCTGCTTCGTGTG
TCATGTGTAAAGGTCGGAAAATGTGATGACCGGCGTCGCGTCATGTTTTC
TGCAACGTACGCGAACGCTCGCTAGCGCTCCTGGTGGCTCTTTTTCGCCA
GACCATGGAGGCAACCAGGCAGTTCTGAACCGCTGCGTGCACGGGGGGGT
TGGTAGGGGGATGAGGTGTCGGCATCACCACCTACGGCAGTTGTATGTAG
TCTGCCTCTACTCGTGTCGATGCCCCACACTTTGCTCGCTTCATGCCGCA
ATGTATCCTCTCCAAGCGCGCGCTGACAGCACGAACCGTCCTTGTTTGGT
TTCCCCCTATGGGCCTGTGGGCACTCACGCACTCGCCCCTGCACACGTTT
GCTGCCCGACACAGATGCAGTCGGACGGGCCCAGCCAGTGGGCGGGCGGG
GGAATCAACGTCTCCGGCGAGGCGCCGTTCGAGATCCGCGGGTTCTCGCT
CGCAAACGCCGCCGCGCTCGTCGGGCTGGCCATCACGTGCGCGTCGTTCT
TCGAGTACTTCTCCACCGGCGGCGCGGGCGGCCTGTCGGGTATCGGGTTT
GTCTACGGCATCCCCATCGCGCTCATCGGCCTGGCGCTGAAGGTGCGGTG
TACGGTCTTGTGCTCTCTGCGCGGGAGGTGAAGCCGCGCGGCTTTGTTGC
ATAAAGCGGACGGTTTTCTTCGCATGCATCTTGTTGTGCATGATGCATGA
CGTGACTATACCTATTTATTGTGCATGTAATTTAGAGCACATTCACGCCG
CACCAGAAGGTTGTTGTTTCGGTTTTGGTTGACGCTGCCTGTTACAGGTT
TTTGTCCATTGCTGGATTGCAGGGAAGCATGGAGTGTTCTAGGGGAGAGA
GGTGTTTAAGCGATACATTTCCTCGTGCTAAAGTGGTGTAGTAGTTGCCT
TGTGAGGACAGATAGTATGAGAGTTCCTACAAAGTCTACGCAGGGTCCTT
CTCTTTCGTGTATCATGTGTTGCACCGCAACCGAGGCACCCCGTAGCAGA
TATCGGCCTGCGTCGAACAAAAGAAGCGATGCTGTCCGGGCACCCAAACC
CCAAAGCTGGGCGTTTGACGGCTCCCTGCGAGGCATGCTAGCTGCGAGCT
CTGAGAATGTTCCCAAGGATTCCGATCCAAATAATGTTGGCATTGGAATG
CTGGCACCGAGAGAGAGCAGCGACGACTCAGAACTCTGCAATATATCGGG
TGTTCGTCCCTCCACATGACAATATTAATATTCCTCGGAAATTCCATCTT
ATTCCACGGCAAGGGCAAACGAGTGCAATTTGGTCTGCTGACGTCCGTCC
CCCTTGGGCATAACCGACCTGAACGCTACTACTGCTGTATGTGGTCTGGC
GGTGCCCCCCCCCCCCCGCTCCGTGAATGCCACACAGTACGCCGAGCTTC
CCCCTGCGCCACTCCAAACGACCCCGGAGGCCGAGGCTTTGTTCGAGGAG
AAGGCCACGGAGGTGTGTGTGTGTGTGTGTGTGTGAGTGAGTTAGTGAGA
GGGTTGAGTGAGTGTGTGTCTGTGTGCGTGGTGAGATGAATGCATGCGCA
GAACCACGGCACGTACTGAGCAACGGTATGTATGTATGTCAGCTGATGTT
TTTGAAACGAGAAGAGAGATGCGGTCGCGTGTTGTACGCAGGTGGTGTGC
CCCCTCTGACCTCCGACAACAGGTTGAGTGATTTACTGCATGTACACATT
GCTCCTCGCTCCGCTTGGCGGCTCCAAAAACAAAGCTACTCCCAAGAAGC
CCGGGATTGTGTGCAAACGTGCAAACTACATACCCTGCGCTCCTAAGATC
CCTTTCTCCTCTTTCGCCTTCCAAAATGTGGGCAGTTTTCATCTGAAAAC
AGAGACCTATGTAGGCCCGTGAAATACATGGTGATGATCTACTGCTGTGT
TTCGATCTCGCGCGACGACCCTACTACACCTCTAGCAGACCCAACCCGCT
CTTTGTTTGTCGTGCTGCTTTTCTTCGTGTCCCTGCCGCACACAATAAAG
CCCCGGGAAAAGTACTGGGCCCCCGAAATCTACCAAGAGCAACGTGCTGT
TATAACATGAACCGCTGAACTAATTGATTCCCCGTCCCCGCCGGCTTGTT
GTTGTTGTTGTTGATGTTGTGGTGGTGTCTGTTTTTTTTCTCGGTGCAAA
CTTGGAAACAACGCCACCAGACCCTCAAGTCTATCAAGAGCGACGTGACC
CGCCACCGGTACGGAGACGAGGCGCACTTGGACACCACGGTCAAGTTCCT
CGGCCTCGTGCTTCCGCAGTCCGACTACCCGCAGCTGCAGTACCTCTCCC
AGGTGAGAACCAGCTCCTCTGACCGCCAGATCTTGACAGGCTACAATATA
CACTTCGACTTCATTGTCGACGAGGGTAGGGAGTGCGGAACCCTGCTCGC
GATAAAACATTTAAGGCAGGAACCGCAGGAGGAGGTCCAACCCCCCCTCC
TGTGTGACCCCGGTTGGGTCGCCTAGCGAGTCGTAGTGGAGGAAGGAGGC
CAGTGGGGCAGACGACAAATATGCCAATGATGGGCGGGAAAAATACATAA
ATGTATACTTCGAAGTATATATATATAGAGAGAGAGATGCCGCACGAGCT
CCACGCGCGCGACGTTTCTGTGTGTGTCACTTGCGTTGCTGTCGCGGCCC
CTCCGGCGGTCGGTCGCACACACCACCTCTGCGGCTTGAAGCCCTCTCGG
GGTTGTACAAAGTCGAGTAGAGGTGAGCGTGTTGAGTTGTCTTCTTTTCG
AGAGGCTAGATCGTGTCGAGTTGTTTCTGTTTCGAGAGGCTATGCAGCTC
TTGTGTGTGTGGAGCAGGCCTGGCTCGTGGAGTCTCACTTCGTCCACACC
CAGAGGGCGAGACACGCGGAAGTTGTTGCATCGCCGCCCCTCAAGGTTGG
AGGCCAAAAATGTCGCGAGTTGGTACTCTCTTTTGGAGCCATCTGCTCTG
TTCTGTTTCGTTTTCCCAGGATGGCTGCGGCTCTTTGTGTGCACGGCACC
ACCGAGAGCAAAAAAAAATGGTCTTTTTTTCGGTGTTTTTTGGTTTTTGT
CATACACACAGCAGCTGCTGTGTGTATAGCTCAAACGTGATATTTTTTGG
GGCAGTTGCCGTTTCATCCCGCTTTTTTCGTGCCTCTTCGTGCAGGCGAG
AGCATAGATCGGCCAACTCCTTCTGCCCGGGTGTTATGACGCGTGTTAAA
GACGGCCTCCTTTTTGTTTACTCGTGGAGACATTTTTTTCACTGCTGTCA
CTGGCTTTAATATATTTTCTGTACGCGAAGTATGTCCGTTTTAATGTGTC
TTGGGTTGTCCCGTGGCTGCTGGCTAAATATTGTACATGACGTTTTTCCC
CGCGTTATGTTGGACGGCCTGGCCCATCAGAAACACTCGCCGTGGGCTCC
ATCGGCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCC
TGCCTGCCTGTGACGACTGAATTTCATTGCCCTTCGTCGTCCCCTCTCTT
GTTTGATTTTCCCTCTACGTCTCGTGCGTGTTGTAGACTATCGAGCCAAA
TGGCGAGCTGGGGTTCTCTATGGTGTTCCAGTCTAAGATGACGCCGTTCA
AGCGGTGGGTGGAGCCGGAGCGCATCCAGAAATACGTGGCCTTCTTCGGG
CCCGGGGTGGATGCGGAGGTGAGAAACGAAAAGATACGCCCCGGCACAAA
CTGTTTTAGTTTTTTTTTTCGTTGATACTGTATTTATGTAAACATCGCAA
AATAGATGGGGAAACAGGGGGTTAGTATGTATGCCTACAACAGTCCCTCT
GGAACGACTTCTTCGCAGCCTGGACGTAAAGACTGCTGACATGTGTAACT
TTAATTAAAATGGATATATGCCCCCCCCCCCTCCTTATATATTCAGAGAG
GGCATTCATGCCTATGTTGGTGTCATCTGTATGTTCCAGCAGCACCGTGA
GTGTCATGTGTTTTGTTAAAAATAAATAAAGAATCAAAGATGGAACCTAA
CCCACACTAGAGCAAAGACTCGATAAGGGGTTCAAACGATATTCCATGCA
GAGACGTAATATTTGGCGAAGCGAGCAGAAAAACAACCTAAATATTTTGA
CGCGGCTTTCTGTAGGCCCCGAGGCGAACGCGGAGGAGGCAAGAAGTTAC
CTTGTGCTCTCTCACAGCGTGCCCGCGTACATACCAGGCGCTTGGTATCC
ACGTGCAAGAAAGGCGGTGCTTGTCAGTGTTCGGCCCTTAACGGAAGGAC
GAAATCAATCACCTGCGAGTCGCTTGTTTCTCGTGGGATATTGCTAATGT
TGGCATATGGCAGTCCTCGGCTTCGGGTGGTGAACGCGGAGGTCGGAACA
TGTGCACTCTACGTCGACGTGTAGGCCCCGAGGGCCCTTCTCTTACACAG
AGTTGTCCGACTGTTTCATTGCATAGCAGCAGTAACCCAGCACGCAGAAC
TTCAAAGCGAGTTCATGTAGCGTCATATTTCCGGCCTTGTTTCGTGCCCT
CTGGCGGTTGCGAGTCGTTTTGCAACTGCCTGTGTTGTTTGTTTAGCTTG
TGCATCTCGCATATACTCCTTTGTATGTATATACCCAGCGAGTCGAGACG
CGGCGCGTTTGGGTATTCCGGAGTTGGCTTAGGACGCACACTAGGACCCA
TCTTGGAGCATGCATGGTCTTCGTGCGTCTTCATTTTCAGCGTGCGCGAC
ACACGCACGCCTTGCGCGGGGGACGTTTGTCCGCTCCTCTTTGTTGACTT
GAGGTGACTCAGTGCCACCACAACCTTAGCTCTTATGCCGCACAGCCACA
GGGGGGCACTCACCACACACCCACAGCGCATACCACATTGTTTGTTGAAT
TTGCGAGGCTTTGGCCAGGGATGTGCGTGTACCTTTCGTTCGGCACAACT
ATGCTGCTGGCTTCACTGCGTAGGTCGTTGAGGTGTTCGTCGAAGCTGTG
GAGGCCATACTCCATGGCCTTGAAGCGCGCGCGCGCGCTAGCCGTAAAGC
CTTGTTCCATGTCGTATATCCACCGTTTCGGCCCGGGCTCTTTTTTGTAC
TACATATCGCACATCTTGAGGCGATCACGGGTCCGAGGGCCGCGAACTGG
CACAAAAATTCATCCAGACCTTTTGGATCCTGAAGCTGTCTCGTGTTTTT
CATGCGCCGGTCGTCCTACAATACCTATTTCCCTTGCAGGTGATCAAGGT
GGATGCCCAGGAGAAGTTGGTGGCGATCAAGCTCACCACGCTTCCCCCAG
GCGTAGAACCCACACCGAAGGTCGCGGCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1727:4651..10179+

>mRNA_L-elsbetiae_contig1727.4815.1 ID=mRNA_L-elsbetiae_contig1727.4815.1|Name=mRNA_L-elsbetiae_contig1727.4815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1734bp|location=Sequence derived from alignment at L-elsbetiae_contig1727:4651..10179+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGAAGGTCGTTCACTTCTGCGTGGCGGCTGCGGCCGCAGCCGACGT
ATGCACGGCTTTCGTCGCCCCCGTAGGGAGGACGGCGGCGGGACTGGCAG
CTTCCCAACAAGCTCGAGTGTCAGTGTCGGCAAGATCCGACACGTTCCAC
CAGCAGCGCCGCAGCACCGGCCATGGCTCGTCCCGCCGCCGGCAGCACCT
TGGCCTACAGATGGTGAAGGTCGTTCACTTCTGCGTGGCGGCTGCGGCCG
CAGCCGACGTATGCACGGCTTTCGTCGCCCCCGTAGGGAGGACGGCGGCG
GGACTGGCAGCTTCCCAACAAGCTCGAGTGTCAGTGTCGGCAAGATCCGA
CACGTTCCACCAGCAGCGCCGCAGCACCGGCCATGGCTCGTCCCGCCGCC
GGCAGCACCTTGGCCTACAGATGCAGTCGGACGGGCCCAGCCAGTGGGCG
GGCGGGGGAATCAACGTCTCCGGCGAGGCGCCGTTCGAGATCCGCGGGTT
CTCGCTCGCAAACGCCGCCGCGCTCGTCGGGCTGGCCATCACGTGCGCGT
CGTTCTTCGAGTACTTCTCCACCGGCGGCGCGGGCGGCCTGTCGGGTATC
GGGTTTGTCTACGGCATCCCCATCGCGCTCATCGGCCTGGCGCTGAAGAT
GCAGTCGGACGGGCCCAGCCAGTGGGCGGGCGGGGGAATCAACGTCTCCG
GCGAGGCGCCGTTCGAGATCCGCGGGTTCTCGCTCGCAAACGCCGCCGCG
CTCGTCGGGCTGGCCATCACGTGCGCGTCGTTCTTCGAGTACTTCTCCAC
CGGCGGCGCGGGCGGCCTGTCGGGTATCGGGTTTGTCTACGGCATCCCCA
TCGCGCTCATCGGCCTGGCGCTGAAGTACGCCGAGCTTCCCCCTGCGCCA
CTCCAAACGACCCCGGAGGCCGAGGCTTTGTTCGAGGAGAAGGCCACGGA
GTACGCCGAGCTTCCCCCTGCGCCACTCCAAACGACCCCGGAGGCCGAGG
CTTTGTTCGAGGAGAAGGCCACGGAGACCCTCAAGTCTATCAAGAGCGAC
GTGACCCGCCACCGGTACGGAGACGAGGCGCACTTGGACACCACGGTCAA
GTTCCTCGGCCTCGTGCTTCCGCAGTCCGACTACCCGCAGCTGCAGTACC
TCTCCCAGACCCTCAAGTCTATCAAGAGCGACGTGACCCGCCACCGGTAC
GGAGACGAGGCGCACTTGGACACCACGGTCAAGTTCCTCGGCCTCGTGCT
TCCGCAGTCCGACTACCCGCAGCTGCAGTACCTCTCCCAGACTATCGAGC
CAAATGGCGAGCTGGGGTTCTCTATGGTGTTCCAGTCTAAGATGACGCCG
TTCAAGCGGTGGGTGGAGCCGGAGCGCATCCAGAAATACGTGGCCTTCTT
CGGGCCCGGGGTGGATGCGGAGACTATCGAGCCAAATGGCGAGCTGGGGT
TCTCTATGGTGTTCCAGTCTAAGATGACGCCGTTCAAGCGGTGGGTGGAG
CCGGAGCGCATCCAGAAATACGTGGCCTTCTTCGGGCCCGGGGTGGATGC
GGAGGTGATCAAGGTGGATGCCCAGGAGAAGTTGGTGGCGATCAAGCTCA
CCACGCTTCCCCCAGGCGTAGAACCCACACCGAAGGTCGCGGCGGTGATC
AAGGTGGATGCCCAGGAGAAGTTGGTGGCGATCAAGCTCACCACGCTTCC
CCCAGGCGTAGAACCCACACCGAAGGTCGCGGCG
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