mRNA_L-elsbetiae_contig1725.4810.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Match: D7FJ76_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ76_ECTSI) HSP 1 Score: 201 bits (511), Expect = 2.600e-54 Identity = 120/221 (54.30%), Postives = 149/221 (67.42%), Query Frame = 2 Query: 140 SSLKAIALVLLGASQNVRAQPGEEPVVISQGECLTSATAGFDYEVLPDDAEEGFLIRWSIDTAAETVSFEAVAQAAAWVGVGFSPDGMMIGADAVIGLPDDASVLEYEMTLKDVSGVLPFAEQEITGGSVSQDTSTTTLAFTRPLAPAGAKQALSAVPGDETILLWASGADNTLEFHGLAPKRGSVAVDLFCGAGAE----TMAPTPAPADTMTASPSSLE 790 SS+KA AL+LL A+Q Q C S FDY+V P D GF + WS+DT AET+S E V+ A AW +GFS D MMIG+DAVIGLPD+++V EY++ + +GVLP A Q+ITGGSVSQD S TTL+FTRPLAPA KQA+S PGDETI L+A G DN L FHGLAP RGS+ +DLFCG G + T+A TPAP T+ +P++ E Sbjct: 5 SSIKASALLLLAAAQLGCGQ--------DLTSCEPSTNGAFDYQVTPTD---GFDVHWSVDTVAETISVEVVSTAVAWTSLGFSSDLMMIGSDAVIGLPDESAVEEYDLISQTTAGVLPSATQDITGGSVSQDASGTTLSFTRPLAPAN-KQAISGTPGDETIFLYAFGGDNELGFHGLAPNRGSLVLDLFCGDGGDGDGATVAGTPAP--TVGGTPTASE 211
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Match: A0A6H5JN46_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN46_9PHAE) HSP 1 Score: 187 bits (475), Expect = 2.120e-49 Identity = 114/233 (48.93%), Postives = 147/233 (63.09%), Query Frame = 2 Query: 140 SSLKAIALVLLGASQNVRAQPGEEPVVISQGECLTSATAGFDYEVLPDDAEEGFLIRWSIDTAAETVSFEAVAQAAAWVGVGFSPDGMMIGADAVIGLPDDASVLEYEMTLKDVSGVLPFAEQEITGGSVSQDTSTTTLAFTRPLAPAGAKQALSAVPGDETILLWASGADNTLEFHGLAPKRGSVAVDLFCGAGAE--TMAPTPAP------------------ADTMTASP 778 SS+KA AL+LL A+Q Q + C S FDY+V P D GF + WS+DT AET+S E V+ A AW +GFS D M+G+DAVIGLP++++V EY++T ++GV+ + Q+ITGGSVSQD S TTL+FTRPLAPA KQA+S PGDETI ++A G N L FHG AP RG + +DLFCG G + T+A TPAP ADT+TA+P Sbjct: 5 SSIKASALLLLAAAQVGCGQ--------NLTSCEPSTNGAFDYQVTPTD---GFEVHWSVDTVAETISIEVVSTAVAWTSLGFSSDLSMVGSDAVIGLPEESTVEEYDLTSHALAGVVLSSTQDITGGSVSQDASGTTLSFTRPLAPAN-KQAISGTPGDETIFIYAFGEGNELAFHGQAPNRGDLTLDLFCGEGGDGATVAGTPAPTXXXXXXASEASSTAPIAADTLTAAP 225
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Match: D7FJ77_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ77_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.200e-30 Identity = 87/209 (41.63%), Postives = 124/209 (59.33%), Query Frame = 2 Query: 140 SSLKAIALVLLGASQNVRAQPGEEPVVISQ--GECLTSATAGFDYEVLPDDAEEGFLIRWSIDTAAETVSFEAVAQAAAWVGVGF-SPDGMMIGADAVIGLPDDASVLEYEMTLKDVSGVLPFAEQEITGGSVSQDTSTTTLAFTRPLAPAGAKQALSAVPGDETILLWASGADNTLEFHGLAPKRGSVAVDLFCGAGA-ETMAPTPAP 754 SSLKA AL LL + V +SQ C SA G+D+EV+P+D G+ IRW+++ + ++ + V + AW G+GF S D ++G+D +IGLPD++SVLEYE+ + V+ F +Q+IT S+ Q +TTL+F RPL+P G KQ +S V GD T L++ GADN L G + VDL+CG G +A TPAP Sbjct: 4 SSLKAAALALLAGAH----------VGVSQFTDSCDASAVDGYDFEVMPED---GYEIRWTLNNDTKMIAIQMVTSSVAWAGIGFPSVDLDLVGSDVIIGLPDNSSVLEYEVLGETAEEVVVFEQQDITEASIVQADGSTTLSFIRPLSPGGNKQNISYVAGDATKLIFGQGADNELGVISDVTWSG-MRVDLYCGTGGIAALARTPAP 198
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Match: D7FYB8_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB8_ECTSI) HSP 1 Score: 130 bits (326), Expect = 5.060e-30 Identity = 72/122 (59.02%), Postives = 89/122 (72.95%), Query Frame = 2 Query: 404 MIGADAVIGLPDDASVLEYEMTLKDVSGVLPFAEQEITGGSVSQDTSTTTLAFTRPLAPAGAKQALSAVPGDETILLWASGADNTLEFHGLAPKRGSVAVDLFCGAGAE-----TMAPTPAP 754 MIG+DAVIGLPD+++V EY++T + + V A Q+ITGG VSQD S TTL+FTRPLAP KQA+S PGDETI L+A GADN L +HGL P RGS+ +DLFCG G + T+ TPAP Sbjct: 1 MIGSDAVIGLPDESTVEEYDLTSQTTARVFSSATQDITGGLVSQDASGTTLSFTRPLAPTN-KQAISGTPGDETIFLFAFGADNELGYHGLPPNRGSLVLDLFCGDGGDGSDDVTVVGTPAP 121
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Match: A0A6H5JKV6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV6_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.480e-28 Identity = 77/168 (45.83%), Postives = 106/168 (63.10%), Query Frame = 2 Query: 221 ISQG-ECLTSATAGFDYEVLPDDAEEGFLIRWSIDTAAETVSFEAVAQAAAWVGVGFSPDGMMIGADAVIGLPDDASVLEYEMTLKDVSGVLPFAEQEITGGSVSQDTSTTTLAFTRPLAPAG-AKQALSAVPGDETILLWASGADNTLEFHGLAPKRGSVAV-DLFC 715 + QG EC S A FDY+V+ AE+GF + W++DTAAE V+ + V +VG+GFS G M+ ADAV+GLPD+ + LEY+++ +S QEI+G SV+Q STTTL FTRPL+PA +K LSA G++ +WA G+ NT ++H RG V DL C Sbjct: 21 LGQGSECTASTDASFDYQVI---AEDGFTVYWTVDTAAEEVTMQVVYDGEGFVGLGFSSTGAMVPADAVVGLPDEGTALEYDLSTYALSSDNEHETQEISGASVTQADSTTTLVFTRPLSPADDSKTVLSAEEGEKATFIWAYGSSNTFQYH---EARGDFTVSDLLC 182
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Match: A0A6H5JMX7_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX7_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.250e-18 Identity = 82/201 (40.80%), Postives = 106/201 (52.74%), Query Frame = 2 Query: 215 VVISQGECLTSATAGFDYEVLPDDAEE-------GFLIRWSIDTAAETVSFEAVAQAAAWVGVGFSPDGMMIGADAVIGLPDDASVLEYEMTLKDVSGVLPFAEQ-----EITGGSVSQDTSTTTLAFTRPLAP-AGAKQALSAVPGDETILLWASGADNTLEFHGLAPKRGSVAVDLFCGAGAETMAPTPAPADTMTASP 778 VV++ TSA +G + EV D E GF+I W+ DT +TVSF A++ W VGFSPDG M+G+DAVI P+D V E + + VL E E++ SQD TT +FTR P + KQ L PG + L+WA G DN +HG + RGS VDLFC GA+ TPAP+ T SP Sbjct: 14 VVLAALAASTSAQSGSNCEVSDLDEYEFMHSPTHGFIIYWTHDT--DTVSFMVEAESEQWTAVGFSPDGDMVGSDAVIYRPEDEEVSEQFLDAQS-EVVLDRDEDDRDTDELSDIEFSQDGDDTTFSFTRNTTPDSSLKQTLPEEPGSQIHLIWALGNDNAFGYHGQS-SRGSFQVDLFCP-GADG---TPAPSAAATVSP 206
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Match: A0A6H5JSH0_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSH0_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 8.610e-18 Identity = 62/136 (45.59%), Postives = 81/136 (59.56%), Query Frame = 2 Query: 353 VAQAAAWVGVGF-SPDGMMIGADAVIGLPDDASVLEYEMTLKDVSGVLPFAEQEITGGSVSQDTSTTTLAFTRPLAPAGAKQALSAVPGDETILLWASGADNTLEFHGLAPKRGSVAVDLFCGAGA-ETMAPTPAP 754 V AW G+GF S D ++G+D +IGLPDD SVLEYE+ + V+ F +Q+IT SV Q +TTL+F RPL+P G KQ +S GD T ++ GADN L G + VDL+CG G +A TPAP Sbjct: 2 VTSTVAWSGIGFPSTDLDLVGSDVIIGLPDDPSVLEYEVLGETAEEVVVFEQQDITEASVVQADGSTTLSFIRPLSPGGNKQNISYEAGDTTKFIFGQGADNDLGVISDVTWSG-MRVDLYCGTGGIAALARTPAP 136
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Match: A0A7S2UHV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHV0_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 4.250e-12 Identity = 53/144 (36.81%), Postives = 79/144 (54.86%), Query Frame = 2 Query: 296 GFLIRWSIDTAAETVSFEAVAQAAAWVGVGFSPDGMMIGADAVIGLPDDASVLEYEMTLKDVSGVLPFAEQEIT--GGSVSQDTSTTTLAFTRPLAPAGAKQALSAVPGDETILLWASGADNTLEFHGLAPKRGSVAVDLF-CG 718 G + WS ++V+ +A+ A WV +G +P+G MIGA+AVIGLPD+ +V +YE+ K S + P + + T G S++Q T L F + L +G L ET+ ++A G N L FH RG+V +DL CG Sbjct: 270 GLSLHWSFVNGNKSVTMKAIYDGAGWVAIGVTPNGDMIGAEAVIGLPDEGTVQKYELNDKSTSSITPLEKGQDTLKGTSITQANGKTILKFEKILKESGE---LEIKAKGETLFMFAVGNTNALSFH---KHRGAVRLDLSKCG 407
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Match: A0A0L0FN83_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FN83_9EUKA) HSP 1 Score: 77.0 bits (188), Expect = 8.150e-11 Identity = 62/185 (33.51%), Postives = 97/185 (52.43%), Query Frame = 2 Query: 164 VLLGASQNVRA-QPGEEPVVISQGECLTSATAGFDYEVLPDDAEEGFLIRWSIDTAAET-VSFEAVAQAAAWVGVGFSPD-GMMIGADAVIGLPDDASVLEYEMTLKDVSGVLPFAEQEITGGSVSQDTSTTTLAFTRPLAPAGAKQALSAVPGDETILLWASGADNTLEFHGLAPKRGSVAVDL 709 VLL ++Q Q ++P+ I EC +S FD+EV DA W +D+ A+T V+ +++ W +GF G+M+ ++AVIG D SV+ Y++T +D SG+ P A + S++Q T L FT + AL D+T ++WA G +N L +HG RGS A++L Sbjct: 463 VLLSSAQAADVGQNPDDPMAIGNPECASS-DPNFDFEVSLSDA---ITFSWFVDSMAQTLVARASISDTVGWFSIGFGQSPGLMVVSNAVIGQISDQSVVTYDLTDRDSSGITPQAVNMASNMSITQTNGATILTFT-----VLSSFALGLDQSDDTNIIWAWG-ENDLGYHGT--NRGSAALNL 635
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Match: B8BUL8_THAPS (DOMON domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUL8_THAPS) HSP 1 Score: 71.2 bits (173), Expect = 4.670e-10 Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 371 WVGVGFSPDGMMIGADAVIGLPDDASVLEYEMTLKDVSGVLPFAE--QEITGGSVSQDTSTTTLAFTRPLAPAGAKQALSAVPGDETILLWASGADNTLEFHGLAPKRGSVAVDLFCGAGAETMAPT 745 W+G G SP G M A+AVIGLPDD +VL+Y+M+ K SGV+P + Q + S+ Q+ +T +AF++ L + + E ++A G NT +HG + RG ++L A T AP+ Sbjct: 66 WLGFGISPSGGMAPAEAVIGLPDDVTVLKYDMSQKSSSGVVPMDDDKQTLMNKSIVQENGSTVMAFSKYL-----DEDTYPLSDGENTCIFAEGGSNTFGYHGSS--RGQFTLNLDTAASTTTDAPS 185 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1725.4810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1725.4810.1 >prot_L-elsbetiae_contig1725.4810.1 ID=prot_L-elsbetiae_contig1725.4810.1|Name=mRNA_L-elsbetiae_contig1725.4810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=256bp MNYSSLKAIALVLLGASQNVRAQPGEEPVVISQGECLTSATAGFDYEVLPback to top mRNA from alignment at L-elsbetiae_contig1725:18047..23521- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1725.4810.1 ID=mRNA_L-elsbetiae_contig1725.4810.1|Name=mRNA_L-elsbetiae_contig1725.4810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5475bp|location=Sequence derived from alignment at L-elsbetiae_contig1725:18047..23521- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1725:18047..23521- >mRNA_L-elsbetiae_contig1725.4810.1 ID=mRNA_L-elsbetiae_contig1725.4810.1|Name=mRNA_L-elsbetiae_contig1725.4810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1536bp|location=Sequence derived from alignment at L-elsbetiae_contig1725:18047..23521- (Laminarionema elsbetiae ELsaHSoW15)back to top |