mRNA_L-elsbetiae_contig172.4785.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig172.4785.1
Unique NamemRNA_L-elsbetiae_contig172.4785.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI)

HSP 1 Score: 975 bits (2520), Expect = 0.000e+0
Identity = 575/726 (79.20%), Postives = 617/726 (84.99%), Query Frame = 1
Query:    1 KVSYALPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVD-RDG-----WCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQ-APEHFLLPALQERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSLPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEAVYDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVP---KKAGAXXASADGQG---PRKPDEMESYESLVRTVGY 2139
            +VSYALPAETVAGLVG+VPALEKARLYRGRGGELMRQAACR+VECLALTKS+V IKTQLRLLDSVDESLRHAVE VQLSA AALKAVL+NWFPVGRDGPSERLRTRT+GLYV GLR EENAAVARGYAMALGVLPRKLAG S A+L E+LDALK+AALGRH P  P         XXXXXXXXXXXXXXX      EPDAETRRNAVRSL  LCEEVGV  +        XXXXXXXXXXXXXXXXXXXXX       GVD R+G     WCPA LTL DVEGVLATLLA++EDYSVDKRGDVGSWCRV+ALAGME LLRLAARASRGLPLANR G  S +PP Q APE  +LP+LQ+RLALLDQPPA VP+PHPCD+V+LTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQ+LVQS+DPQLPFVPER AVKHAITHGAA  A   G+A  E +  V+WA P TTFPMVVGLLAV EYHDAIV GLV+SVGGLSESVV  SSK+LLRW+RACKS+RNLRAVAGLALRLVGMF  A+GNPR+VVPLLKTLE LLSNECFDSLPAE HPFA+LLL  V  EMKGCRDVRKICLGASVFVCML+YS P R +ALRNSVLFLGHRFPNVRKT AEA+YLKLLANE++VDEAVY+EALDILTCTAWDGDLQ AK ARSALA LL V+VP     KKAGA   +A G+G   PRK DEMESYESLVRTVGY
Sbjct:  729 QVSYALPAETVAGLVGIVPALEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVGRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGELLDALKNAALGRHAP--PRSPSLATTGXXXXXXXXXXXXXXXIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GVDAREGESGAAWCPAWLTLADVEGVLATLLASSEDYSVDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGIASVQPPAQQAPETLILPSLQDRLALLDQPPASVPTPHPCDEVYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVQSDDPQLPFVPERAAVKHAITHGAATPAV-PGAAGEEGKEPVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVMSVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKGNPRIVVPLLKTLELLLSNECFDSLPAE-HPFAELLLVAVVAEMKGCRDVRKICLGASVFVCMLNYSDPVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEEVVDEAVYEEALDILTCTAWDGDLQTAKAARSALAHLLGVNVPTAAANKKAGAGTGAAAGEGGGNPRKADEMESYESLVRTVGY 1443          
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A6H5KHZ4_9PHAE (TFCD_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHZ4_9PHAE)

HSP 1 Score: 492 bits (1267), Expect = 2.010e-162
Identity = 265/331 (80.06%), Postives = 285/331 (86.10%), Query Frame = 1
Query: 1165 QLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSLPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEAVYDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVP---KKAGAXXASADGQG---PRKPDEMESYESLVRTVGY 2139
            +LSEKLDSVRERAGTVLQ+LVQS+DPQLPFVPER AVKHAITHGAA  AA  G+A  E + AV+WA P TTFPMVVGLLAV EYHDAIV GLVISVGGLSESVV  SSK+LLRW+RACKS+RNLRAVAGLALRLVGMF  A+GNPR+VVPLLKTLE LLSNECFDSLPAEEHPFA+LLL  V  EMKGCR+V KICLGASV VCML+YS P R +ALRNSVLFLGHRFPNVRKT AEA+YLKLLANED+VDEAVY+EALDILTCTAWDGDLQ AK ARSALA+LL VSVP     KKAGA    A  +G   PRK DEMESYESLVRTVGY
Sbjct:  106 KLSEKLDSVRERAGTVLQKLVQSDDPQLPFVPERAAVKHAITHGAATPAA-PGAAGEEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKGNPRIVVPLLKTLELLLSNECFDSLPAEEHPFAELLLVAVVAEMKGCRNVGKICLGASVLVCMLNYSDPVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEDVVDEAVYEEALDILTCTAWDGDLQTAKDARSALAQLLGVSVPTAAANKKAGAGTGDAAAKGGGNPRKADEMESYESLVRTVGY 435          
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 5.090e-120
Identity = 231/335 (68.96%), Postives = 246/335 (73.43%), Query Frame = 1
Query:    1 KVSYALPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDG-------WCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANR 984
            +VSYALPAETVAGLV +VPALEKARLYRGRGGELMRQAACR+VECLAL KS+V IK+QLRLLDSVDESLRHAVE VQLSA AALKAVL+NWFPVGRDGPSERLRTRT+GLYV GLR +ENAAVARGYAMALGVLPRKLAG S A+L EVLDALKDAALGRHGP  P                              EPDAETRRNAVRSL  LCEEVGV  + +      XXXXXX                     G    +G       WCPA LTL DVEGVLATLLA++EDYSVDKRGDVGSWCRV+AL GME LLRLAARASRGLPLANR
Sbjct:  619 QVSYALPAETVAGLVSIVPALEKARLYRGRGGELMRQAACRLVECLALAKSEVSIKSQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVGRDGPSERLRTRTIGLYVGGLRTQENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKDAALGRHGP--PRSPSPATTGGGAANGTTETNGGGDIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQXXXXXXXXXXXXSQEPGSGEGRHDSGGVSSGGSGVDAPEGESGAAAAWCPAWLTLADVEGVLATLLASSEDYSVDKRGDVGSWCRVEALEGMERLLRLAARASRGLPLANR 951          
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA)

HSP 1 Score: 357 bits (915), Expect = 1.560e-101
Identity = 282/785 (35.92%), Postives = 364/785 (46.37%), Query Frame = 1
Query:   16 LPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQL-RLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQERLALLDQ---------PPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAI-THGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARG--------------------------NPRVVVPLLKTLEFLLSNECFDSLPAEEHP-FADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVD-----------------------------------EAVYDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVPKKAGAXXASADGQGPR----KPDEMESYESLVRTVGY 2139
            LP +  A +   VPALE+A LYRGRGGE +R AACR+ EC AL+ +      QL RLLD+ DE LR   EDVQ +A AA +A+L+     G     E L  R V  +V GL      A ARG+A+ALG LPR LA    A    VL AL  AA    G R                                E DAETRRNAV +LA +CE VG      G                                          AGLT  D   V A LL A +DY  DKRGDVGSWCRV A+  +E + RLA  ASRG+PL       +  PP       L+PAL  R   +           PP          + + TP     V+ A+LKQLSEKLD+VR+ AG  LQRL+ +  P +P++P RP ++ A+   GAA                 +WAS    FP +   L++P Y  A+ AGLV+SVGGL+ESVV QS+ +LL W RA  ++ +  AV+ L   LV +  G                               RV +P L+TL+ LL+N+ F  LPA         LLA     ++GCR V K+C GA   + +  +       ALR++V  L  RFP+VR+  AE +Y++LLA ED  D                                   EA+ DEAL+IL+CTAWDG L+ A+ AR  +A  L V +    +AG+   SA G G      + DE+  YESLVR VGY
Sbjct:  697 LPPQLSAAVADAVPALERANLYRGRGGEAVRAAACRLAECAALSDAVELTAPQLVRLLDTCDECLRQVSEDVQRAAAAAARALLRRACAGGAGAADEALFERAVAAHVRGLAEAAAPAEARGHALALGALPRPLAARDAAARARVLTAL--AAACAPGAR-----------------------------VGGEGDAETRRNAVAALAAVCETVGFGVSGGGGG----------------------------------------AGLTAADAAAVFAALLRATDDYGTDKRGDVGSWCRVAAMHALERMARLAVAASRGIPLERAPAAAATAPP-------LVPALSGRQPFMQVAVVNGAVAVPPRARRRAAAAAEAYWTPVDAAAVVRALLKQLSEKLDAVRDHAGQALQRLLAARAPAIPYIPLRPQLEAALGVRGAAPPP--------------NWASAADAFPRIARALSLPSYQSAVAAGLVVSVGGLTESVVKQSAAALLAWARAAGAA-DPSAVSQLGATLVALLNGCNAAAXXXXXXXXXXXXXXXXXXXXGSGDRDRVALPALRTLDLLLANDAFAPLPAPARARLGAELLAAARGALRGCRFVAKLCAGAGALMGLAAWPDGVGRGALRSAVALLAQRFPHVRRHVAELMYVRLLAWEDAEDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSPEAL-DEALEILSCTAWDGALEAAREARDGVAAALGVPL---LRAGSRRGSASGGGXXXGGAEADEL-GYESLVRDVGY 1383          
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A7S3Q9K5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9K5_9STRA)

HSP 1 Score: 307 bits (787), Expect = 3.970e-84
Identity = 231/736 (31.39%), Postives = 367/736 (49.86%), Query Frame = 1
Query:   25 ETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQERLALLDQPPAPVPS---------------PHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQL-PFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAV----DWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDS-LPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYS-GPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEAVYDEA-LDILTCTAWDGDLQ---EAKTARSALAKLLEVSVPVPKKAGAXXASADGQGP------RKPDEMESYESLVRTVG 2136
            E +A +  +V A+EKARLYRGRGGE+MR A  R++EC+AL +  + +K Q+ LLDS+D +L+H  E +Q++A +AL ++++++FPV   GPSERL++R V  YV  +R +EN A  RGY++ALG LP KL   +   L+ V+D L    +  H                                   + DAETRRN+++SL R+C+ VGV     G S  A                             V  DG          V  V   L  A EDY+ D+RGDVGSW R++A+ GME L  L  +AS  +P     G +  E     P    +P++  RL  L+   A V +                +   Q +    +V +V+ ++LKQLSEKLD+VR +AG+ L+R++      + PFVP +  +  A+                 R   +    +W++P  TFP+++  + +  + ++I+AG++ISVGGL+ES+   SSK+L+ ++RA    + +  +A +   L+ +F+    + RV++PLL T++ LLS+   D+ L +  + F+  L   V +E   C D++++     V + +L       +   L   +  L H+FP VR+ TAE LY+KL+ +E +V  A   EA  D+L+  +WD +L      +  R+ +A  L + +          +  D  GP      +  D+ ESY SLV T G
Sbjct:  811 ELIASISDLVFAIEKARLYRGRGGEIMRAAVSRLIECMALAQVPMNVKQQIGLLDSLDANLKHPNEIIQVAASSALYSLMRSYFPVRESGPSERLQSRVVDKYVESVRGDENPAATRGYSLALGYLPAKLLAPTVEGLDAVIDCL---CVSSH----------------------------PSTLIGGQGDAETRRNSIKSLVRICQVVGV-----GISADANPSYPT-----------------------VAMDG--------SQVMRVFKALFDAVEDYNTDRRGDVGSWSRIEAMKGMEALTYLVIKASN-IPHTMSCGPEENENTKDVP---CVPSIARRLRYLE---ADVSTRVRSCLSESKPFRQFSYSSTQTYFDDELVSKVLSSILKQLSEKLDAVRGQAGSCLERMLSEKTSIIVPFVPSKALLLEAL-----------------RLNDIPLQHNWSNPAVTFPLMMKAINIEAFFESILAGMIISVGGLTESITKSSSKALMDYMRALHKIKAVGKIAKIGHGLIKLFDKHTKDGRVILPLLVTVDKLLSHGLLDAILVSPTNDFSKDLSLRVRREASRCNDIKRLMAIVPVALSILHCEVAETQNTTLLFLMRLLAHKFPRVRRHTAEQLYIKLVEDESVVPNATNIEAGNDLLSQASWDRELGPPGNVRAYRNQVANFLGIEL----------SEKDLSGPVMKKVVKVKDDFESYASLVSTAG 1445          
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: B8BSV8_THAPS (Tubulin-specific chaperone d (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSV8_THAPS)

HSP 1 Score: 295 bits (755), Expect = 8.190e-81
Identity = 218/664 (32.83%), Postives = 319/664 (48.04%), Query Frame = 1
Query:   49 VVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSLPA-EEHPFADLLLATVAKEMKGCRDVRKICLGASV-FVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIV--DEAVYDEALDILTCTAWDGDLQEAKT---ARSALAKLL 2019
            +VP++EKARLYRGRGGE+MR AACR +EC++     + +K Q+RLLDSVD  L H  E +Q SA  AL A+L ++FPV   GPSERL++R V  Y++ +++E+N A  RG+++ALG LP KL   S  +L+ VLD L  A+                                       E DAETRRNA+ SL  +C+  G+      SS  A                                       LT    E V A LL+A EDY++D+RGDVGSW RV A+ G+E L  L+  A                                                     F    +   ++ A+LKQL EKLD+VR  AG  L+RL+ +N+P+LPFVP R  +  A+                 +QG  +W++P  TFP+++  + +  + D I++GLVISVGGL+ESV   SS SL  WIR  +S++    +  +    +G+F+  + N RV++PLL TL+ LLS+   D L + ++  F   L+  ++ E KGC DV+++     V F  +  +    +  AL   +  L + +P VR+  AE L+ KL  + D +  D    +EA  +L    W  +     T   AR+ +A LL
Sbjct:  617 LVPSIEKARLYRGRGGEIMRAAACRTIECISTANITLTVKQQVRLLDSVDACLVHPNETIQNSAAKALLALLTSYFPVSSKGPSERLQSRVVDKYISIVKSEDNPAATRGFSLALGHLPGKLLAPSEQVLDSVLDCLIHAS-------------------------------KKSTLVGGEGDAETRRNAILSLINVCKTAGIGH----SSLEANLSPTNS--------------------------------LTTCQTERVFAALLSAMEDYNMDRRGDVGSWSRVAAMNGLEALTYLSYSAK----------------------------------------------------FFDEGLCCSILSALLKQLGEKLDAVRCEAGECLERLLTNNNPRLPFVPHRTMLIRALD--------------LNKQGK-NWSNPAMTFPLLMCAINIDVFLDPILSGLVISVGGLTESVSKSSSASLFEWIRDLRSAKATSKLYQMGEVFLGLFDKNKRNGRVLLPLLATLDKLLSHGYMDELLSRKDGAFLSCLMICLSNESKGCSDVKRLLAIVGVSFNVIQPHLETMKEMALPFIMTMLLNSYPRVRRYVAEQLFAKLSVDGDALFDDHECLEEANQLLLSVVWHDEHDPCGTITEARNRIADLL 1146          
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A4D9D438_9STRA (TFCD_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D438_9STRA)

HSP 1 Score: 264 bits (674), Expect = 1.600e-69
Identity = 247/831 (29.72%), Postives = 357/831 (42.96%), Query Frame = 1
Query:   16 LPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDA--LKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGV---AGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGL-----------------PLANRGGD---------------------DSAEPPGQAPEHF--------LLPALQ-ERLALLDQPPAPVPSPHPCDQV------------------FLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIR----------------ACKSSRNLRA-VAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECF--------------DSLPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLD--------YSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEA--VYDEALDILTCTAWDG-DLQEAKTARSALAKLLEVSV-----------PVPKKAGAXXASADGQGPRKPDEMESYESLVRTVGY 2139
            LP ET+  +V +VP +E+ARLYRGRGGEL+R AACR++ECLAL    + +KTQLRLLDS+DE+LRH  + V+  A+AA++A    +F  G D PS R++ R V  Y   +  +EN A+ RG+  ALG LP +L   S   L + ++     D  +G                                     EPDAETRRN + +L  + E +GV    GE +G+                                          G+    V  +++ LL   +DY++DKRGDVGSW R+ AL G+E  + L  R   GL                 PL  R GD                     + A PPGQA  +         L P    + L++ D+             V                   ++P +   ++ AVLKQL EKLD+VRE AG VL  +       LP   +  A    +   AA  + AEG  +      +        +P VV LL V  YH+AIVAGLVISVGGL+ESVV  S  +++ W R                ACK    +   +   +  L+G+F+  RGN RV++PLL++L+                      D   A +   +  L   + +E+ GCR+V K+     V + +L             A   ALR  +L LGHRFP VRK  A+ LY  LL ++ ++       +  L+ L   AW+  DLQ     R  +  +L ++             V  + G+     +G G    +E+ SY +LV+ +GY
Sbjct:  697 LPGETLKAVVAIVPRIEQARLYRGRGGELVRAAACRLIECLALALVPLSVKTQLRLLDSLDENLRHPTDAVRAHAVAAIRAFTHAYFGRGMDEPSARVQARVVDKYRRLVETDENVALTRGFLRALGALPSRLLFPSFPALLDTIETQLAPDRRVG------------------------------------DEPDAETRRNGILALGEMAETLGVEVSGGERKGAR-----------------------------------------GMNRAQVHRLISLLLKGTDDYAMDKRGDVGSWVRMAALQGLEKTVTLVRRGGGGLTGGAVEDSREGWQDGQRPL--RVGDWVLTTHGRGQVRDLRCNEHLCEIAFPPGQAGAYLFPYGPGCGLFPRQSCQPLSVSDEVKDARTDDAAATAVGTASIGDAEVARFASSTSLISPELTTAIVSAVLKQLCEKLDAVRECAGRVLSTI-------LPLARDAEAYSTLL---AAFLSEAEGGFS------LKGGDSAAVYPRVVRLLGVRAYHEAIVAGLVISVGGLTESVVKASVAAVVEWARQQRLSKRERQEECRSNACKDGHKMPPRLQEFSESLLGLFDAHRGNDRVIMPLLRSLDLFYQKGVLVPRAQAAGWEVGSEDGKHAGKASLSWRLADRLLREVTGCRNVTKLLACLRVALHLLSPLTFRAGQEEEEAGAAALRLVLLLLGHRFPRVRKLAAQELYTALLLHDHLLAGGGDAQERVLEALLGAAWEEEDLQALCGVRDEICAVLVLAPLGAGGTLGAGGTVVSRRGSDEGGREGAG----EELASYAALVKEMGY 1428          
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A8B8QXP2_9MYRT (tubulin-folding cofactor D isoform X2 n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A8B8QXP2_9MYRT)

HSP 1 Score: 260 bits (664), Expect = 2.650e-69
Identity = 214/712 (30.06%), Postives = 333/712 (46.77%), Query Frame = 1
Query:   10 YALPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQ-ERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSLPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEAVYDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVPKKAGAXXASADG-QGPRKPDEMESYESLVRTVGY 2139
            Y LP +    + G++PA+EKARLYRG+GGE+MR A  R++EC++L+   VP K    LLD++ E+LRH    +Q +A+ ALK     +F  G  GPS+        +Y+  L + +N AV RG A+ALGVLP +         ++VL  L  A      P                                 + DAE R NAV+ L  +CE +    E   +S  A                                       L L   + V+ +L  A +DYS+D RGDVGSW R  A+ G+E    +  +              SA P G   EH  LP L  + L   D             ++    ++   ++  ++KQ  EK+D +RE A TVLQR++ + +  +PF+P R  ++  I +               ++G + W  P  ++P  V LL V  Y   +V+GLVIS+GGL +S+   S+ +LL +++   +         L+  ++ + E  R   RV+ P LKT+E L S   F ++ A    F + LL ++A E+KG +D  K+  G ++   +   S P  +RA  + + FLGHR+P +RK +AE +YL LL   D+V E   ++AL+I++ T W+GDL+ AK  R  L ++  + + +  K        +G +     DE  SY SLV + G+
Sbjct:  400 YPLPDDKQKKVAGIIPAIEKARLYRGKGGEIMRAAVSRLIECISLSHLLVPKKIIRSLLDTLSENLRHPNSQIQNAAVRALKHFTVAYF--GDGGPSD-----ATTMYLDQL-SNQNVAVRRGCALALGVLPYQFLATK---WKDVLIKLSGACAIEDNPE--------------------------------DRDAEARVNAVKGLISVCETL--TQEREQASALAEEDVMS---------------------------------LYLLIKKEVMMSLFNALDDYSIDNRGDVGSWVREAAMDGLERCTYILCKRD--------SLSSSARPLGV--EH--LPNLSNDELVENDS------------RLLFDTNLATTLVAGLVKQAVEKMDKLREAAATVLQRVLYNREIFVPFIPHREKLEEIIPN---------------KKG-LKWGVPTFSYPRFVQLLQVSCYSKPLVSGLVISIGGLQDSLRKASTSALLEYLQGEDNDTRKSREYILSSDVLWVLEQYRKCDRVITPTLKTIEILYSKRIFLNMQAHTSLFCNGLLDSLAIELKGSKDFTKLYSGIAILGFIASVSEPVNSRAFSHLLTFLGHRYPKIRKASAEQIYLVLLQGGDLVSEDKMEKALEIISETCWEGDLETAKQQRLQLFEIAGLEMGINLKTHTVRLKNEGLKQATSTDENASYSSLVDSTGF 993          
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A1Y1IDY3_KLENI (Beta-tubulin folding cofactor D n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDY3_KLENI)

HSP 1 Score: 262 bits (669), Expect = 5.470e-69
Identity = 240/753 (31.87%), Postives = 339/753 (45.02%), Query Frame = 1
Query:   16 LPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRT-RTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXD------GGVDRDGWCPAGLTLGDVEG-VLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIR---------ACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSL--PAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIV--------------DEAV------YDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVPKKAGAXXASADGQGPRKP------DEMESYESLVRTVGY 2139
            L +E  A + GVVPA+EKARLYRG+GGE+MR A CR++E  A     +PIKT   L  S+ ++L+H   D+Q SA +AL A     F      PS+  R  RT   Y A +R + N A  RG A+ALG LP+ L      + +EVLD L  A + +  P                                 E DAETR NAVR+LA +CE +G+     GS   +                          +          R+    +GL +G V G V+  LLAA +DY+ D RGDVGSW R  A+  +E +  L    +        GG+   E        F      + +               C+    TP +  RV+  + KQ +EK+D VR  AG+VLQRL+  ++P +  +P    ++  I   A                 ++WA P  TFP+ V LLA   +  A++AGLVISVGGL++S+   S+ +LL +++         A +       + G A    G+F+   G  RV+VP LKTL  LL +     L  PA+ H  A  +L +V  E++GC+D+ K+  G  V         P R+ AL+  +  LG+R+P VR   AE LY  LL  ED+                EA+       + A D+L  T W   + E K  R  L  LL+V  PV    G+  ASA   G R+       DE E+Y +LV   GY
Sbjct:  661 LTSEMQASVGGVVPAIEKARLYRGKGGEMMRGAVCRLIERTAHVGLPLPIKTLKLLEGSILDNLQHPTPDIQASAASALSA-----FAAAYLLPSKPERVNRTTLKYAAIIRDDPNPAAKRGCALALGALPKPLLNP---VWKEVLDTLCGATVLQANPE--------------------------------ERDAETRVNAVRALAVVCETLGLETRENGSMPVSTSGSQNESGTQSVAGTVNGNPDGQKRETLALGESSTQRE---DSGLPVGVVSGQVMEHLLAALDDYATDNRGDVGSWVREAAMESIEKVTYLLCHVAASETCHVAGGEAVKEIDENG---FSTSGSGKEVK--------------CNGDAFTPELAARVIAGLAKQAAEKIDRVRNVAGSVLQRLLARSNPPVAAIPHGGVLRGIIPADAV----------------INWAVPSQTFPLTVQLLAFRPFRSALLAGLVISVGGLADSLGKASASALLDFLQTRGSIQLDEADRGDSGEELLNGFADAFKGLFDSDAGLDRVIVPALKTLAILLEDRTLQKLQLPAKLH--ARGILDSVGTELRGCKDIPKLLAGVDVLCSFARLPDPDRSAALQQLLGLLGNRYPKVRMQCAEKLY-DLLYIEDLTRAEEIAESLPAGPEQEALRSRIADLEAACDLLLETKWSSPVNEIKDKRDGLFCLLKVEKPVAV-VGSVAASA---GVRRKVEVKFRDENETYGALVDDAGY 1330          
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A059C4C2_EUCGR (TFCD_C domain-containing protein (Fragment) n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059C4C2_EUCGR)

HSP 1 Score: 256 bits (655), Expect = 1.810e-68
Identity = 215/718 (29.94%), Postives = 335/718 (46.66%), Query Frame = 1
Query:   10 YALPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSS---RNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSLPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEAVYDEALDILTCTAWDGDLQEAKTARSALAKL--LEVSVPVPKKAGAXXASADGQGPRKP---DEMESYESLVRTVGY 2139
            Y+LP +    + G+VPA+EKARLYRG+GGE+MR A  R +EC++L+   VP K    L D++ E+LRH    +Q +A+ ALK     +F  G  GPS+   T    L      +  N AV RG A+A+GVLP +         ++V+  L  A      P                                 + D E R NAV+ L  +CE +    + R  S A                                        L L   + V+ +L  A +DYSVD RGDVGSW R  A+ G+E    +  +              S  P G   EH    +  E   L+D              +    ++   ++  ++KQ  EK+D +RE A TVLQR++ + +  +PF+P R  ++  I +               ++G + W  P  ++P  V LL    Y  ++V+GLVIS+GGL +S+   S+ +LL +++   +    RN      L+  ++ + E  R   RV+ P LKT+E L S     ++ A    F + LL ++A E+KG +D  K+  G ++   +   S PA +RA  + ++FLGHR+P +RK +AE +YL LL   D+V E   ++AL+I++ T W+GDL+ AK  R  L ++  LE+++ +  K     A +  +G +KP   DE  SY SLV + G+
Sbjct:  324 YSLPDDKQRKVAGIVPAIEKARLYRGKGGEIMRAAVSRFIECISLSHLLVPKKIIRSLFDTLSENLRHPNSQIQNAAVKALKHFTVAYF--GDGGPSDATTTYLDQL------SNPNVAVRRGSALAIGVLPYQFLATK---WKDVIMKLCGACAIEDNPE--------------------------------DRDVEARVNAVKGLVSVCETLT---QEREQSPALAEEDLRS--------------------------------LYLLIKKEVMMSLFNALDDYSVDNRGDVGSWVREAAMDGLERCTYILCK--------RESLSSSVRPCGF--EHSPNLSNDE---LVDNE----------GTLLFDTNLATTLVAGIVKQAVEKMDKLREAAATVLQRVLYNREISVPFIPHREKLEEIIPN---------------KKG-LKWGVPTFSYPRFVQLLQSSCYSRSLVSGLVISIGGLQDSLRKASTSALLEYLQGEDNESLDRNKSREYTLSCDVLWVLEQYRKCDRVITPTLKTIEILFSKRILLNMEAHTSTFCNGLLDSLAIELKGSKDFTKLYSGIAILGFIASVSEPANSRAFSHLLIFLGHRYPKIRKASAEQIYLVLLQGGDLVSEDKMEKALEIISETCWEGDLETAKQQRLQLFEIAGLEMAINLKTKT----ALSKNEGRKKPTSTDENASYSSLVESSGF 920          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNX3_ECTSI0.000e+079.20Tubulin folding cofactor D n=1 Tax=Ectocarpus sili... [more]
A0A6H5KHZ4_9PHAE2.010e-16280.06TFCD_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KH41_9PHAE5.090e-12068.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZJS0_9STRA1.560e-10135.92Tubulin folding cofactor D n=1 Tax=Tribonema minus... [more]
A0A7S3Q9K5_9STRA3.970e-8431.39Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B8BSV8_THAPS8.190e-8132.83Tubulin-specific chaperone d (Fragment) n=1 Tax=Th... [more]
A0A4D9D438_9STRA1.600e-6929.72TFCD_C domain-containing protein n=2 Tax=Monodopsi... [more]
A0A8B8QXP2_9MYRT2.650e-6930.06tubulin-folding cofactor D isoform X2 n=5 Tax=Myrt... [more]
A0A1Y1IDY3_KLENI5.470e-6931.87Beta-tubulin folding cofactor D n=1 Tax=Klebsormid... [more]
A0A059C4C2_EUCGR1.810e-6829.94TFCD_C domain-containing protein (Fragment) n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig172contigL-elsbetiae_contig172:42015..52243 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score920.6
Seed ortholog evalue4.2e-265
Seed eggNOG ortholog2880.D8LNX3
KEGG koko:K21767
Hectar predicted targeting categoryother localisation
EggNOG free text desc.post-chaperonin tubulin folding pathway
EggNOG OGsCOG2116@1,KOG1943@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Ec32 ortholog descriptiontubulin folding cofactor D
Ec32 orthologEc-08_005480.1
Exons12
Model size2900
Cds size2040
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig172.4785.1prot_L-elsbetiae_contig172.4785.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig172 42773..52141 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815716.70343-UTR-L-elsbetiae_contig172:42014..427721622815716.70343-UTR-L-elsbetiae_contig172:42014..42772Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig172 42015..42772 -
1691683056.3901448-UTR-L-elsbetiae_contig172:42014..427721691683056.3901448-UTR-L-elsbetiae_contig172:42014..42772Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig172 42015..42772 -
1622815716.8600187-UTR-L-elsbetiae_contig172:52141..522431622815716.8600187-UTR-L-elsbetiae_contig172:52141..52243Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig172 52142..52243 -
1691683056.5355937-UTR-L-elsbetiae_contig172:52141..522431691683056.5355937-UTR-L-elsbetiae_contig172:52141..52243Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig172 52142..52243 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815716.717081-CDS-L-elsbetiae_contig172:42772..429941622815716.717081-CDS-L-elsbetiae_contig172:42772..42994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 42773..42994 -
1691683056.409705-CDS-L-elsbetiae_contig172:42772..429941691683056.409705-CDS-L-elsbetiae_contig172:42772..42994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 42773..42994 -
1622815716.7302966-CDS-L-elsbetiae_contig172:44601..447581622815716.7302966-CDS-L-elsbetiae_contig172:44601..44758Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 44602..44758 -
1691683056.4187999-CDS-L-elsbetiae_contig172:44601..447581691683056.4187999-CDS-L-elsbetiae_contig172:44601..44758Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 44602..44758 -
1622815716.7420137-CDS-L-elsbetiae_contig172:45198..453291622815716.7420137-CDS-L-elsbetiae_contig172:45198..45329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 45199..45329 -
1691683056.4265604-CDS-L-elsbetiae_contig172:45198..453291691683056.4265604-CDS-L-elsbetiae_contig172:45198..45329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 45199..45329 -
1622815716.752005-CDS-L-elsbetiae_contig172:46122..463251622815716.752005-CDS-L-elsbetiae_contig172:46122..46325Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 46123..46325 -
1691683056.434736-CDS-L-elsbetiae_contig172:46122..463251691683056.434736-CDS-L-elsbetiae_contig172:46122..46325Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 46123..46325 -
1622815716.761882-CDS-L-elsbetiae_contig172:46677..467821622815716.761882-CDS-L-elsbetiae_contig172:46677..46782Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 46678..46782 -
1691683056.4451075-CDS-L-elsbetiae_contig172:46677..467821691683056.4451075-CDS-L-elsbetiae_contig172:46677..46782Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 46678..46782 -
1622815716.7721221-CDS-L-elsbetiae_contig172:46842..469991622815716.7721221-CDS-L-elsbetiae_contig172:46842..46999Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 46843..46999 -
1691683056.4551983-CDS-L-elsbetiae_contig172:46842..469991691683056.4551983-CDS-L-elsbetiae_contig172:46842..46999Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 46843..46999 -
1622815716.7845752-CDS-L-elsbetiae_contig172:47700..478171622815716.7845752-CDS-L-elsbetiae_contig172:47700..47817Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 47701..47817 -
1691683056.465393-CDS-L-elsbetiae_contig172:47700..478171691683056.465393-CDS-L-elsbetiae_contig172:47700..47817Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 47701..47817 -
1622815716.7960873-CDS-L-elsbetiae_contig172:48415..484801622815716.7960873-CDS-L-elsbetiae_contig172:48415..48480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 48416..48480 -
1691683056.4752643-CDS-L-elsbetiae_contig172:48415..484801691683056.4752643-CDS-L-elsbetiae_contig172:48415..48480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 48416..48480 -
1622815716.8086205-CDS-L-elsbetiae_contig172:48802..493691622815716.8086205-CDS-L-elsbetiae_contig172:48802..49369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 48803..49369 -
1691683056.4848745-CDS-L-elsbetiae_contig172:48802..493691691683056.4848745-CDS-L-elsbetiae_contig172:48802..49369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 48803..49369 -
1622815716.8206277-CDS-L-elsbetiae_contig172:50738..508391622815716.8206277-CDS-L-elsbetiae_contig172:50738..50839Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 50739..50839 -
1691683056.4986193-CDS-L-elsbetiae_contig172:50738..508391691683056.4986193-CDS-L-elsbetiae_contig172:50738..50839Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 50739..50839 -
1622815716.8358026-CDS-L-elsbetiae_contig172:51531..516741622815716.8358026-CDS-L-elsbetiae_contig172:51531..51674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 51532..51674 -
1691683056.5123308-CDS-L-elsbetiae_contig172:51531..516741691683056.5123308-CDS-L-elsbetiae_contig172:51531..51674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 51532..51674 -
1622815716.8481884-CDS-L-elsbetiae_contig172:52069..521411622815716.8481884-CDS-L-elsbetiae_contig172:52069..52141Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 52070..52141 -
1691683056.5264773-CDS-L-elsbetiae_contig172:52069..521411691683056.5264773-CDS-L-elsbetiae_contig172:52069..52141Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig172 52070..52141 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig172.4785.1

>prot_L-elsbetiae_contig172.4785.1 ID=prot_L-elsbetiae_contig172.4785.1|Name=mRNA_L-elsbetiae_contig172.4785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=680bp
MRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAAL
KAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVL
PRKLAGGSRAILEEVLDALKDAALGRHGPRSPPPPPDSNGGVGSGGTGSS
GGSGGAGGGPGGEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAGGGG
DVPRSGGGGGGGGGGGGGDGGGDGGVDRDGWCPAGLTLGDVEGVLATLLA
AAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSA
EPPGQAPEHFLLPALQERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMC
AVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAA
AAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISV
GGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPR
VVVPLLKTLEFLLSNECFDSLPAEEHPFADLLLATVAKEMKGCRDVRKIC
LGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLAN
EDIVDEAVYDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVPKKAG
AGAASADGQGPRKPDEMESYESLVRTVGY*
back to top

mRNA from alignment at L-elsbetiae_contig172:42015..52243-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig172.4785.1 ID=mRNA_L-elsbetiae_contig172.4785.1|Name=mRNA_L-elsbetiae_contig172.4785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10229bp|location=Sequence derived from alignment at L-elsbetiae_contig172:42015..52243- (Laminarionema elsbetiae ELsaHSoW15)
AAGGTCTCGTATGCCCTCCCGGCTGAGACCGTGGCGGGGCTGGTGGGAGT CGTCCCGGCGTTGGAGAAGGCGCGGTTGTACCGCGGCAGGGGGGGCGAGC TGATGAGGCAGGCGGCGTGCAGGGTGGTGGAGTGCCTGGCCCTGACCAAG TCGGACGTGCCGATCAAGACGCAGGTATGTATGTATGTATGTATGTACTT CTATGTAAACATGTATGTTAACACCCTTTTCTGGCTCGTTTGGGGTTTGG TTGCAGAGCGCTGCAGAGCGCTTTCAGTCCGCCGTGTGCCTCTCCGGGGT TGGGGCGCTCTCGCACCGCCGGCCGGTTTGGGGGCTTCGTGGCATGTATT TGGGGGGGGGGGGCTGGGCGTAAAAGGGAGGTAAATAGCTGTGTTTCTCT GCGAAGATTGAGGGTCCTCTCCTGGCTACTCCAGTAGCCAATAGGCGAGC GCCCAGCTCCTGCCTCGGGGTGGTTTTCTTCTTTCGCCTGGTGTACATAG TTCTGGCCGTGCATCTTTTCAAGCGCCCTTATGCCCTTCTCATTTTCCCC TGGAATCGCCACGCTTCAGCTGCGCCTCCTGGACTCGGTGGACGAGAGCT TGCGGCACGCGGTGGAGGACGTCCAGCTGTCCGCCATGGCAGCCCTTAAG GCGGTGCTCAAGAACTGGTTCCCCGTTGGCCGGGATGGGCCATCGGAACG GTTAAGAACAAGGCGAGTGACCCCCCCCCCCCCCCGCCTACCCCGCCTCT ACTGACCGGTGGAGCGCGGAACCCCCAAGCGCATATACGGCACGTGTGTG GGTGTTGGCCGAGGTGTTTACAGACACGCAAAGCGGTGATATGTGCACCG TTTTCCAGTCGATGCATGCGCAAATGTTGAGGGGTATCTACAACAGTAGT AGTAGAGTGAGGGGGTGCAAATGGCCGGATCTTTTTTAAACTCTTGATAT GCTTTTGTTTTCCCTTTTTTCGGGGGTTGTTTGTAATTACAGGTATGAAG ATACCTGTGTACTTCCTATATAGCGCGTCGTTCTTAAGTGGCCGATTCGT GTTAGCTATCTATCTTGCGGCACACAACTTGATGGTTTTTGTTGCACTAC GTACTAGCTGGGCCGGTGGGTTATTATTTCCTCTCTCATTGTTGCTTTGC TGGCCCTTCGGGTCCATTTTATTTTTCGTGTACATACTTTTTCTTGGGTA CAAGTTAGCCTGTGACCACGGGAATTGACCGCATCAAGTGTTGGATTAGT ACGGACATTGAGAGGTACTGGATGGAGAGATCGGAACGGTTTTTTATGTG AAGACAACATACAACACATACATACATACATACATCGCCGAATTGTATGT CTTTACCTCTTCTGCCTGTCCTCTCCCTCCGCTCGTTCGTCGTGCTGCTC CCAGGACGGTCGGCTTGTACGTCGCCGGGCTGAGGGCCGAAGAGAACGCG GCGGTGGCCAGGGGCTACGCGATGGCGCTGGGAGTCTTGCCGAGGAAGCT TGCCGGTGAGTGAGCCATGGCGCCTTGAAAGATAAATCGAGTCCTTGCTC TAGTGTGGGGTAGGTTCCGTCTTTGACTCATTGTTTATTTATTTTTTTAA ACCAGATAATCAAAAACGGAGCCTAAATAGCCGACATTTGAGACGGGACT CCGTGGGGTTCAACCGGTATTCAATATAGACTAAAAGTGACGTCATATTA TTAGTCCATCCGAGTAGAAAAACACCTAAAATGTCGGAAGAATCCAACAT CTAAATCCCCTGTAGAGTTAGTTCTGCCTGGTCAACCAACATGCATTTGC TTTGTATGTATACATAAATACAAAGGCGCAGCAGCGGCTTTGTTTTGATG TGCTGCATGGGTACCTTGCGGCCTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTTTGTCTTTGCGTTTGTTGGTCACTCGAAGTCGAACCTCGTGC CGGGCTTTCCCCGCCCCCGGAAGGCCGTGTGTCTTTTAAAAATAAACAAA GAATCAAAGATGGAACCTAACCCATACTGGAGCAAAGACTCGATATGGGG TTCAAACGGTATTCCATACAGAGACGTAATATTTGGCGAAGTAAGCAGAA AAACAACCTGAATATCAGAAGAGTTCAACATCTCCCCTGCAAAGATTTAG ATTTGTGTGTCTTTGCGTTTGTTGCTCACTCGAAGTCGAACCTCGTGCAG GGCTTTCCCCGCCCCCGGAAGGCTGTGTTTGTCTTCGCTCGCGCTTGAGT TGCTCGCTCGAAGTTGAATCTCGTGTGTCCGGGAGCACGACAGTACCCCT CGTGATCTCAGAAGCCGTTCATCTCACCTAGCTGTGTGCTCTTGTCCCCA CGTAGTCAACGAAACAAACGGCCCCGCACAGCACGGGACCAGGAGAGCAC GTGGGTTGCAGTCCTGAGATCTTTCCCCCCCCCCCCCGTTGCCATTTTTG TTTCGACCTTGTGTCAGTTTGTTATTTTACTTCGTACGAGTATAGGACTT GCGTTTTTCAGTATACCCTGTTTGTAAAGTTACCCTGTGACCGCGGGCAT CGACCGCGTCAGGGTTGGATTAATACGGACTCATGGAGGTGTACTGGATA GAGAGATCGGAACGGTTTTTAGTGCGAAGACAATAACAACAACATAGGAC TTGGTGCGGGAGTGGTCCGCTTGGTGATGGCACCCCTACCAGGGTATCTT AGCTGCAGCCCCCCCCAAAAAAATAAAAGTAGAATATGGGCTACAGCAGT ATTATATCTCTTCCCGATGTTGTGGGGCTTAAATCAGTTTGGGGACTAGA GAGCTACCTCGCCTGTAACGTTCCGCCGCCCTTCGCCTGCATTCAAACAA TGCCGTTACCCCACCCTGCACCAGGCGGGTCGCGTGCTATCCTCGAAGAA GTTCTAGACGCGCTGAAGGACGCCGCTCTCGGCCGCCACGGCCCCCGCTC GCCGCCGCCGCCGCCGGACAGCAACGGCGGGGTCGGGAGCGGCGGGACCG GCAGTAGCGGTGGCAGCGGGGGCGCAGGTGGGGGTCCGGGGGGCGAGCCC GACGCCGAGACGCGGAGAAACGCGGTCCGGTCGCTGGCGAGACTGTGCGA GGAGGTCGGGGTGGCGGGGGAGCCCCGTGGCTCGTCCTGTGCGGCAGGGG GGGGTGGTGATGTTCCCCGGAGCGGCGGTGGTGGTGGTGGTGGTGGTGGT GGTGGTGGTGGTGATGGTGGTGGCGACGGCGGTGTTGATCGCGATGGGTG GTGCCCGGCGGGGCTCACCCTCGGGGATGTGGAGGGGGTGCTGGCGACGC TGCTGGCGGCGGCGGAGGACTACTCCGTGGACAAGCGGGGGGACGTCGGG TCTTGGTGCAGGGTGGACGCGCTGGCCGGGATGGAGGGGCTGCTGAGGCT CGCCGCGAGGGCGTCCAGGGGGTTGCCGCTCGCGAACCGCGGTGAGGGAG TGAGAGGAGGGGGGCGTGCTGCACCTCTTGTGTGGGGGGGGTTGGGTTGG TTTGTAGCACGGCGGTGTGCGGTTTGCGGAGAAAAACTGTGTGCCGTGGT CGGCAGAGCCGTGACCACTACGGTCCGCACGTTGGCGGCCAATGGGGGTA TCGTGTGTGTGTGTGTTGGAGATCTGCTGTGTAGAAGGTAAGCTAGTTCG GAAGACCATGTGCGAAGTCAATGGCGGCCCAGTTCCCTTCAAAAATGCCT TTAATCATCCCTGCCGTTTTTCTTTTCCCCGCCCGCCCACCGTCGCCCCG GCTCCACCGCCAGGTGGTGACGATTCTGCGGAGCCCCCAGGGCAAGCCCC GGAACATTTCCTGCTTCCAGCTCTGCAGGTGAAATAATTCCCCATGAAAA CCCTAAACGTGATGTCGGTTATATATCGTGTCTATTTATGCAGAAATGAT CAGCCGTCTCTTTCTGCCGCAAAGCAACCCATGCACCGTGGGTTTGTGTG GATGGACGTCCGTGTGCTTGGAAAGTGTTTTTATTGCGTGGGGGGACACG CTGTAGTCCAAGCTAGTACCTATGCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCANNNNNNNNNNGGGTGGGCGTGTGTTTGCTGGGAAG TGGTTTTTTTTTCGGGGGGGGACCCGGCTTTCGCCAAGCGCTACCCTTTG CCCCCCCCCCCCCCCCCGCCGCGTTTCTCTCCCACAAATGTGTATGTAGT CCCGCCACGAAAGAAGTGCCCCGCTTCCTCCCCATGAACGTATTTTTATT TTTATCTGCCTGGGTTTGACACCATGTTGCCACCCGTCGGTTGGGTCGTC CAGCTAGTCGTAGTGGAGGAAGGGGGCCAGTGGGGCAGACGACGAATACA TAAGCCAATAATGGGAGAAACAAAAAAAAAAAAAAAAACGCGCTGCCTCG AAACCCCAAAAATCCCCCGTCCGTAGGAACGGCTTGCCCTTCTGGACCAG CCGCCGGCGCCGGTGCCCTCGCCGCACCCCTGCGACCAAGTGTTCCTGAC GCCTTCCATGGTGGAGCGGGTCATGTGCGCCGTCCTCAAACAGGTGCGGG TTCTTTGTATGTATGTGTCTAGTTGTTTTCTCCTACATAGTGTAGCCTCG CTCTGTTTCTTAGTTTGGTTGCCTGGTGTCTTCTCCGAGGCAAGCGGGGC TTGTTTGACTCTGGGCGGTCATGAAGCATGGAGACTCGTTTTTTTTTTTG TTTTTTTTTGGTTTGCCTCCCCCCCGGTGGCCCCCCCCCCCCCCCCCCTG ACTGCACTTTTCTCATGTGCGGGGGTATGTGGGCATTGAAGTGCCGGCGG CAGGCGCGAGCATTCTGGCGACAGATCAACAACAAGGTCGTCGTTGAATT AGCTTTTCGGTCGGTAGAGAACCGAGTAAGTGTGTGTGCAAAATCGGCCC TATGTACTCCCTTTTCCCTCGTTCGCGCACCCGTGCCTCCTTAGGCCCTG ACTTGATTTGCACAGCTAGTGCAAAAATGGACTTTTTTAGCACAAATAGA AGAGAAAATAAGACCGAATTGTGCGTTTGTGCACGAAAATTGTGCACATT TGAGCATCGATCCCTTTTCTGAGCATAAACAACGTGCATGAATGACGTTT TTGGGATACATTGCATACAAACAAACAAGGCCAAGTAGCATTAAATCAGG GCCTAAGCGTGCATACGTATCAAGTCAGGGCCTATATGTAGCCTCCCAGA TGGCTTTATCTGTCTATGTTTTCTCCTGACCGCCGCCGCCACAGCTGTCG GAGAAGCTGGATTCGGTCCGAGAACGGGCCGGGACCGTTCTCCAGAGGCT CGTCCAGTCAAACGACCCGCAGCTTCCCTTCGTGCCGGAAAGACCGGCCG TCAAGCATGCCATCACGCACGGGGCGGCGGCAGCGGCGGCGGCGGAGGGA TGTCTCGGAGGCTCCGCTGCTGCGGGCGGGGGGGCGGCAGCCGCGGCAGC AGCAGCGGCAGCGGCGGCGGCCGAGAGGCAGGGGGCCGTGGACTGGGCCA GCCCCAGGACGACTTTTCCGATGGTGGTCGGGCTGCTGGCGGTGCCGGAG TACCACGACGCCATCGGTGAGAGAGGCCGCGAGGTTTCCGCTTCCCTTCC CCGCGCTCTGTCTGTTGTTTGTTTTGGTCTTGGAACGTGCTCCCTGAGTT GTTTGGTATTTTGTCGTTTTTGTTGTTCCTGCTTTTTTCACAGTAGTAGC TCCCGGTCCAGAGCATAATATAACATCCATGGGGGCCCCGGTGTTCACAA GCTGAGGGTTTCCACGGCAACTTGCTCTGCATTTGCTGTAACGTTTCGCT TGCCGCTGATCCCCTCCTCTCCTCGCCCGTCCGCCCTTCACGTGCTCTTT TGGGCCGGTTCCGAACCCGGAACACGGCCACTAAACGATAACGACGACGG CAAAACCAAAACCAATAGTGGCAGGCCTGGTGATCAGCGTGGGGGGGCTG AGCGAGTCCGTGGTAGCGCAGTCGTCCAAGTCGCTCCTGAGGTGGATCCG GGCGTGCAAGTCGTCGAGAAATCTGAGGGCGGTGGCCGGGCTGGCGCTCC GCCTGGTGGGCATGTTCGAGGGCGCGCGGGGGAATCCCCGGGTCGTGGTC CCTCTCCTCAAGACCTTGGAGGTGTGTGTGTGCGTGTGCGTGTGCGTGTG CGTGTGTGTGTGTGTGTGGGTGTGTGGGTGTGTGTGGGTGTGGGTGTATG TGTGGGTGAGTGAGTGCTTGATTATGTGTTCTGAGTGTGTGTTTGTGTGT GTGTTCCCACACCGGGGGGCATTCCGCGTGTCTTCTGTTGTGGTTTTTTG GAGCGTGGTGTGCCCCTCGCCCAGAAGGGACGACAGAGAGGTACCTAGGC AGGTAAAGTGTGTACATGGGCACTTGAGCCCAAAGCACTCCAGGGGTACC TACGCCATTGGATCATCTACTTTACTTCGGCTGTTGCCTTTTGGAGGGGG GACACTGTGGTGTCTCAGGCGTGTTCGAAAGGCGAGACGAACCTGTCGCG GGCCGCCTCGATATATTCTCCGCCGGGCGCGTATGTACCATACTGGTGTT TGTTTTATTTTTCTTCGCGGCGTCGAGTGTGCCTTTTGTTTTGTGACCAC GGGCCCCCCAAGGATGTTTTGTGGACTAGAGAGGTAATGTGAGAATCAAC AACAACAACAACAGCAACTCTACCGCTCCGCTGCTCTTTTGGTGAGGCGG GCCACGTTGGCAGCTCTCCTACTGCTGTTCGTGTTGCCTGATTGAGGGTC TGGCGAAGGGCGCACACACAAACACCCCGCGGGTTGTCGCCGAATACATG ACCCGCGCCGCTGTTTGCGGCCTGTGCAGCGGCTGCTTCGTTTGTGAGCC TCGTCTATTCTGAGCCCTGACGCCCCCTTTCCCGGACCCCCCCCCCCCCC GGCGTGTGTTTCAGTTTTTGCTGTCGAACGAGTGCTTCGACTCTCTCCCT GCAGAGGAGCACCCGTTCGCCGACCTGCTCTTGGCCACGGTGGCGAAGGA GATGAAGGGCTGCCGTGACGTCAGAAAGATCTGCCTGGGAGCAAGGTGAG AGAGGGGACGCACAACATTCCCTCGATACTTCCGCCGCCGGTGTGTGGTC ATCTGACAGACCTGCAGGTGATCTTGCTGTACACATTTGCTTACGGTGGA TTTATCGGTACACGGCAGTTTCAAGACTTCTGAAAATCCGACTCGAAGTC ATCACAACCCCAGGCACATCGGAGAAGCGATATTTACAGCCATAAAAGGC GACACCAAAGAAACAAGAGGGCTTGCTCTCTCTCCCCTGGTTAACTCCAA GCTCTGGAAAAAAATGGCACCCCACCCGCCGTCCTCCCTCACCCCTGGTT AACTCCAAGCTCTGGAAAAAAATGGCGGAACAGATTTGAGGGACCCCCCG AAGTTTTTTTTTTGAAATACCTCAACCCCCCCCCCCTCGGCTGCGTGTTT TTTGTTGTCGCTCGGCCCCCCTTCGCTACGCTCAGCGTGTTCGTGTGCAT GCTGGACTACTCGGGGCCAGCGCGCACGAGGGCGCTCCGCAACTCCGTGC TGTTCCTCGGGCACCGGTTCCCGAACGTGAGGAAGACCACGGCGGAAGCG CTGTATCTCAAGCTGCTTGCCAACGAGGACATCGTCGACGAGGTACGCAA AACGGCCCTACTGTTTGTATCTGTGTGTCTACATAGATGCGTCCAAGAGC GCGTGTCCCTGTCCCGCGGCTGATGTTTGTGCATGCATGGGTGCGGCGGG ACTAGACTGCGGCTCTGTGGTGGCGCGCCCGTGGTGTCTCGTGCCTGGTG TGTTTTTGACGGGGCCGTGCTGGATGTGCCGTAGGTGACGCAAAATACCA CACCCCCTGGACCGACTTTTAGAGCTCCATTACTCCGTAACGACGAGGGT GCCAGCACCAAACGACACATTTTCGGACAGCCCTCGACTAGATATTTCCA ACGCCACCCCTTTCGGCACTGGCACTCCTTCTTGCTGGGGAGGAATCGAG CTTTAAAAGTATGTCCTGGGGGTGTGGTATCCTGTGTCATCTACGGTATC TATCGGGCCCAGGGCTTCAGATAGCTGTTTTGCTGTTGCGATATTGCACT TATTTCCGAAAATATCCGGAAATCGCCACAGACGGCGAGGACCTCGTTGC GCCTTGGCGCAACGAAAATATTTTGGGCGCAACAGTTTCGCCGCAGGCGA AAAAGTTTTGTTGCGCCGCGGCGAAAAATATTTGGGGTACCTTTTACTCG AAGAGGGTGTTCAATGTTCAATGCAGTCAATGTTCTACGATGTTGTGTTG TTCGTGCAGTGTTGTTGTATTGTGTGTTGTAGTATTATGTCGTTCTTGCA ACACAACAGACGGCAGACCACTGACGGCAGGCAGTTAACACATTTGATGG CATTCTACGAATGTTTTCTGTTTGTTTATAGGAGTACTACTTGTAGGCTC AAGCCTATTATACTTAATAATCTCACAACGTCATCGGTCTACCTCCAATT TCGTGCGGCTTTCAAAACAGTTACACGCTTCTTCGAGTGATCTAAATCAT GTTAAAATCATGGTCGTAAGGGGAAATTGTGCTAATATCCCAAAAAAAGG CCTCCGGCGGCCCTCCCGGGGGGCGCGGTTGTCGCAACAGCCGCTGCGCG GCATCTGAAGCCCTGATCGGGCCGTGCAGCGCGTGCCAACCAACGTTCTG CTCGTGTTCTGCAAAATTAGGTGACAGTGGCACGAGGTTCGATACGGCAG AAGAAGCCGTTCACGCTTGAGGGCGAAATTTATGAATCACAACCTTTTTG ACCATAAATTTATGAAACGCCGTTGTGTCAGTTTTTGTTCTCTTGTGTGC CCCCCAGCAAACCCGGGGCCTTTTCGTGGCCCCCCCCCCCCCCCCCCCCC CCCCACCCACCACACCCTCCCTCCCCCCTCCCCCCCCCGCCCCCCCTCCC CNNNNNNNNNNACAAATTTTTATAAACCCGCTGTTTCTTTTTTTTTTTTC TTTTTTGCCCCCCCCCCAACCCCGGGCCTTTTTTTTCCCCCCCCCCCCCC CCCCCCTACAAAAGCCTCTTGTTTTGGGCCTTCTCCCCTTCCCAGCCTAC TCCACTTTAACTCTTTGCGCCCCCCCCGCCCCCGCAACCCCCTTGTGAGA TGTACAACATACCCACTGAGCTACATATCGGCAGCCAGCGTACCCCTGCT CCCAGCCCATTACCCCCTTCCGCCCTCCTCTCGGATCGAAACAAAAAAGG CCGTGTACGACGAAGCGCTGGACATCCTCACCTGCACCGCATGGGACGGC GACCTCCAAGAGGCCAAGACCGCGAGGTCCGCGTTAGCAAAGCTGCTGGA AGTGAGCGTGCCCGTCCCCAAGAAGGCCGGGGCGGGTGCCGCCTCGGCTG ATGGCCAGGGCCCCCGCAAGCCCGACGAAATGGAGTCGTATGAGTCACTC GTGAGGACCGTAGGGTACTAAACTAGCGGACACGGTCGGGTTTTTTCTGG CGAGGTAGACACTAGGCCTCTCTGTCGACAGGATCAGCGGACGTTCGCAT CGAGAGGAAATATAATGATATGATGCGTCTGTGTTTACATACATGCATCG AAGTTGTTGAAAGTATGTATGTATGTACTCCAATAGTTCCGTCGGAAGTT AGCGCATTTTTTTCCTTTTGGCTTCCGCGATGTGTGCCAGTGGGCTGGCT TTGGGCGCGGATGCACAACGTAAAGCTCATATGCCTTCACTGCTGTTGCT GCTTGCGGACGATGCTTTACCATTTGTTGCCGTAAAACACGGGCGAAGAT GCGTATGTATTGTCATAGCTACCACGGCATTACGAGGGTGGGTTTATTCC CAGAATATTTGCTGGTTGGCCTGGCAGAGTAGTGATGCAGGGGGGGTGTT GAACTCTTCTATTATTGTGTATTTGATCAATTTTCATTTTCGTTTATTTA GATAGATGTCGGCAACCTACGTTCGTCTCACCTGTGAGAAGACCTGGGGT ATGTTTATACTCGGCCGGACCAGTACTCCATCGCCGTTACGGAAGGAGTA CCGTCCGTTATTGTTCTACCACAGACCCGTCTCTAATAGATGGCCTAGGG TGTGTGGGTTACCCTAGGCTGCTTCCTTAGTTTTGTTTTTGTATTAGTTG CTGTTCTTCTCGGTAGCGTCGGCTTTCTGTGATGTAGGTGTTCGCACTCG CTACATAGACATTTCATTTGTCTCTCGCG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig172:42015..52243-

>mRNA_L-elsbetiae_contig172.4785.1 ID=mRNA_L-elsbetiae_contig172.4785.1|Name=mRNA_L-elsbetiae_contig172.4785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4080bp|location=Sequence derived from alignment at L-elsbetiae_contig172:42015..52243- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGCAGGCGGCGTGCAGGGTGGTGGAGTGCCTGGCCCTGACCAAGTC
GGACGTGCCGATCAAGACGCAGATGAGGCAGGCGGCGTGCAGGGTGGTGG
AGTGCCTGGCCCTGACCAAGTCGGACGTGCCGATCAAGACGCAGCTGCGC
CTCCTGGACTCGGTGGACGAGAGCTTGCGGCACGCGGTGGAGGACGTCCA
GCTGTCCGCCATGGCAGCCCTTAAGGCGGTGCTCAAGAACTGGTTCCCCG
TTGGCCGGGATGGGCCATCGGAACGGTTAAGAACAAGCTGCGCCTCCTGG
ACTCGGTGGACGAGAGCTTGCGGCACGCGGTGGAGGACGTCCAGCTGTCC
GCCATGGCAGCCCTTAAGGCGGTGCTCAAGAACTGGTTCCCCGTTGGCCG
GGATGGGCCATCGGAACGGTTAAGAACAAGGACGGTCGGCTTGTACGTCG
CCGGGCTGAGGGCCGAAGAGAACGCGGCGGTGGCCAGGGGCTACGCGATG
GCGCTGGGAGTCTTGCCGAGGAAGCTTGCCGGACGGTCGGCTTGTACGTC
GCCGGGCTGAGGGCCGAAGAGAACGCGGCGGTGGCCAGGGGCTACGCGAT
GGCGCTGGGAGTCTTGCCGAGGAAGCTTGCCGGCGGGTCGCGTGCTATCC
TCGAAGAAGTTCTAGACGCGCTGAAGGACGCCGCTCTCGGCCGCCACGGC
CCCCGCTCGCCGCCGCCGCCGCCGGACAGCAACGGCGGGGTCGGGAGCGG
CGGGACCGGCAGTAGCGGTGGCAGCGGGGGCGCAGGTGGGGGTCCGGGGG
GCGAGCCCGACGCCGAGACGCGGAGAAACGCGGTCCGGTCGCTGGCGAGA
CTGTGCGAGGAGGTCGGGGTGGCGGGGGAGCCCCGTGGCTCGTCCTGTGC
GGCAGGGGGGGGTGGTGATGTTCCCCGGAGCGGCGGTGGTGGTGGTGGTG
GTGGTGGTGGTGGTGGTGGTGATGGTGGTGGCGACGGCGGTGTTGATCGC
GATGGGTGGTGCCCGGCGGGGCTCACCCTCGGGGATGTGGAGGGGGTGCT
GGCGACGCTGCTGGCGGCGGCGGAGGACTACTCCGTGGACAAGCGGGGGG
ACGTCGGGTCTTGGTGCAGGGTGGACGCGCTGGCCGGGATGGAGGGGCTG
CTGAGGCTCGCCGCGAGGGCGTCCAGGGGGTTGCCGCTCGCGAACCGCGG
CGGGTCGCGTGCTATCCTCGAAGAAGTTCTAGACGCGCTGAAGGACGCCG
CTCTCGGCCGCCACGGCCCCCGCTCGCCGCCGCCGCCGCCGGACAGCAAC
GGCGGGGTCGGGAGCGGCGGGACCGGCAGTAGCGGTGGCAGCGGGGGCGC
AGGTGGGGGTCCGGGGGGCGAGCCCGACGCCGAGACGCGGAGAAACGCGG
TCCGGTCGCTGGCGAGACTGTGCGAGGAGGTCGGGGTGGCGGGGGAGCCC
CGTGGCTCGTCCTGTGCGGCAGGGGGGGGTGGTGATGTTCCCCGGAGCGG
CGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGCG
ACGGCGGTGTTGATCGCGATGGGTGGTGCCCGGCGGGGCTCACCCTCGGG
GATGTGGAGGGGGTGCTGGCGACGCTGCTGGCGGCGGCGGAGGACTACTC
CGTGGACAAGCGGGGGGACGTCGGGTCTTGGTGCAGGGTGGACGCGCTGG
CCGGGATGGAGGGGCTGCTGAGGCTCGCCGCGAGGGCGTCCAGGGGGTTG
CCGCTCGCGAACCGCGGTGGTGACGATTCTGCGGAGCCCCCAGGGCAAGC
CCCGGAACATTTCCTGCTTCCAGCTCTGCAGGTGGTGACGATTCTGCGGA
GCCCCCAGGGCAAGCCCCGGAACATTTCCTGCTTCCAGCTCTGCAGGAAC
GGCTTGCCCTTCTGGACCAGCCGCCGGCGCCGGTGCCCTCGCCGCACCCC
TGCGACCAAGTGTTCCTGACGCCTTCCATGGTGGAGCGGGTCATGTGCGC
CGTCCTCAAACAGGAACGGCTTGCCCTTCTGGACCAGCCGCCGGCGCCGG
TGCCCTCGCCGCACCCCTGCGACCAAGTGTTCCTGACGCCTTCCATGGTG
GAGCGGGTCATGTGCGCCGTCCTCAAACAGCTGTCGGAGAAGCTGGATTC
GGTCCGAGAACGGGCCGGGACCGTTCTCCAGAGGCTCGTCCAGTCAAACG
ACCCGCAGCTTCCCTTCGTGCCGGAAAGACCGGCCGTCAAGCATGCCATC
ACGCACGGGGCGGCGGCAGCGGCGGCGGCGGAGGGATCTGTCGGAGAAGC
TGGATTCGGTCCGAGAACGGGCCGGGACCGTTCTCCAGAGGCTCGTCCAG
TCAAACGACCCGCAGCTTCCCTTCGTGCCGGAAAGACCGGCCGTCAAGCA
TGCCATCACGCACGGGGCGGCGGCAGCGGCGGCGGCGGAGGGATCGGCGG
CGGCCGAGAGGCAGGGGGCCGTGGACTGGGCCAGCCCCAGGACGACTTTT
CCGATGGTGGTCGGGCTGCTGGCGGTGCCGGAGTACCACGACGCCATCGC
GGCGGCGGCCGAGAGGCAGGGGGCCGTGGACTGGGCCAGCCCCAGGACGA
CTTTTCCGATGGTGGTCGGGCTGCTGGCGGTGCCGGAGTACCACGACGCC
ATCGTGGCAGGCCTGGTGATCAGCGTGGGGGGGCTGAGCGAGTCCGTGGT
AGCGCAGTCGTCCAAGTCGCTCCTGAGGTGGATCCGGGCGTGCAAGTCGT
CGAGAAATCTGAGGGCGGTGGCCGGGCTGGCGCTCCGCCTGGTGGGCATG
TTCGAGGGCGCGCGGGGGAATCCCCGGGTCGTGGTCCCTCTCCTCAAGAC
CTTGGAGTGGCAGGCCTGGTGATCAGCGTGGGGGGGCTGAGCGAGTCCGT
GGTAGCGCAGTCGTCCAAGTCGCTCCTGAGGTGGATCCGGGCGTGCAAGT
CGTCGAGAAATCTGAGGGCGGTGGCCGGGCTGGCGCTCCGCCTGGTGGGC
ATGTTCGAGGGCGCGCGGGGGAATCCCCGGGTCGTGGTCCCTCTCCTCAA
GACCTTGGAGTTTTTGCTGTCGAACGAGTGCTTCGACTCTCTCCCTGCAG
AGGAGCACCCGTTCGCCGACCTGCTCTTGGCCACGGTGGCGAAGGAGATG
AAGGGCTGCCGTGACGTCAGAAAGATCTGCCTGGGAGCAAGTTTTTGCTG
TCGAACGAGTGCTTCGACTCTCTCCCTGCAGAGGAGCACCCGTTCGCCGA
CCTGCTCTTGGCCACGGTGGCGAAGGAGATGAAGGGCTGCCGTGACGTCA
GAAAGATCTGCCTGGGAGCAAGCGTGTTCGTGTGCATGCTGGACTACTCG
GGGCCAGCGCGCACGAGGGCGCTCCGCAACTCCGTGCTGTTCCTCGGGCA
CCGGTTCCCGAACGTGAGGAAGACCACGGCGGAAGCGCTGTATCTCAAGC
TGCTTGCCAACGAGGACATCGTCGACGAGCGTGTTCGTGTGCATGCTGGA
CTACTCGGGGCCAGCGCGCACGAGGGCGCTCCGCAACTCCGTGCTGTTCC
TCGGGCACCGGTTCCCGAACGTGAGGAAGACCACGGCGGAAGCGCTGTAT
CTCAAGCTGCTTGCCAACGAGGACATCGTCGACGAGGCCGTGTACGACGA
AGCGCTGGACATCCTCACCTGCACCGCATGGGACGGCGACCTCCAAGAGG
CCAAGACCGCGAGGTCCGCGTTAGCAAAGCTGCTGGAAGTGAGCGTGCCC
GTCCCCAAGAAGGCCGGGGCGGGTGCCGCCTCGGCTGATGGCCAGGGCCC
CCGCAAGCCCGACGAAATGGAGTCGTATGAGTCACTCGTGAGGACCGTAG
GGTACTAAGCCGTGTACGACGAAGCGCTGGACATCCTCACCTGCACCGCA
TGGGACGGCGACCTCCAAGAGGCCAAGACCGCGAGGTCCGCGTTAGCAAA
GCTGCTGGAAGTGAGCGTGCCCGTCCCCAAGAAGGCCGGGGCGGGTGCCG
CCTCGGCTGATGGCCAGGGCCCCCGCAAGCCCGACGAAATGGAGTCGTAT
GAGTCACTCGTGAGGACCGTAGGGTACTAA
back to top