mRNA_L-elsbetiae_contig172.4785.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI) HSP 1 Score: 975 bits (2520), Expect = 0.000e+0 Identity = 575/726 (79.20%), Postives = 617/726 (84.99%), Query Frame = 1 Query: 1 KVSYALPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVD-RDG-----WCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQ-APEHFLLPALQERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSLPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEAVYDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVP---KKAGAXXASADGQG---PRKPDEMESYESLVRTVGY 2139 +VSYALPAETVAGLVG+VPALEKARLYRGRGGELMRQAACR+VECLALTKS+V IKTQLRLLDSVDESLRHAVE VQLSA AALKAVL+NWFPVGRDGPSERLRTRT+GLYV GLR EENAAVARGYAMALGVLPRKLAG S A+L E+LDALK+AALGRH P P XXXXXXXXXXXXXXX EPDAETRRNAVRSL LCEEVGV + XXXXXXXXXXXXXXXXXXXXX GVD R+G WCPA LTL DVEGVLATLLA++EDYSVDKRGDVGSWCRV+ALAGME LLRLAARASRGLPLANR G S +PP Q APE +LP+LQ+RLALLDQPPA VP+PHPCD+V+LTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQ+LVQS+DPQLPFVPER AVKHAITHGAA A G+A E + V+WA P TTFPMVVGLLAV EYHDAIV GLV+SVGGLSESVV SSK+LLRW+RACKS+RNLRAVAGLALRLVGMF A+GNPR+VVPLLKTLE LLSNECFDSLPAE HPFA+LLL V EMKGCRDVRKICLGASVFVCML+YS P R +ALRNSVLFLGHRFPNVRKT AEA+YLKLLANE++VDEAVY+EALDILTCTAWDGDLQ AK ARSALA LL V+VP KKAGA +A G+G PRK DEMESYESLVRTVGY Sbjct: 729 QVSYALPAETVAGLVGIVPALEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVGRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGELLDALKNAALGRHAP--PRSPSLATTGXXXXXXXXXXXXXXXIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GVDAREGESGAAWCPAWLTLADVEGVLATLLASSEDYSVDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGIASVQPPAQQAPETLILPSLQDRLALLDQPPASVPTPHPCDEVYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVQSDDPQLPFVPERAAVKHAITHGAATPAV-PGAAGEEGKEPVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVMSVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKGNPRIVVPLLKTLELLLSNECFDSLPAE-HPFAELLLVAVVAEMKGCRDVRKICLGASVFVCMLNYSDPVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEEVVDEAVYEEALDILTCTAWDGDLQTAKAARSALAHLLGVNVPTAAANKKAGAGTGAAAGEGGGNPRKADEMESYESLVRTVGY 1443
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A6H5KHZ4_9PHAE (TFCD_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHZ4_9PHAE) HSP 1 Score: 492 bits (1267), Expect = 2.010e-162 Identity = 265/331 (80.06%), Postives = 285/331 (86.10%), Query Frame = 1 Query: 1165 QLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSLPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEAVYDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVP---KKAGAXXASADGQG---PRKPDEMESYESLVRTVGY 2139 +LSEKLDSVRERAGTVLQ+LVQS+DPQLPFVPER AVKHAITHGAA AA G+A E + AV+WA P TTFPMVVGLLAV EYHDAIV GLVISVGGLSESVV SSK+LLRW+RACKS+RNLRAVAGLALRLVGMF A+GNPR+VVPLLKTLE LLSNECFDSLPAEEHPFA+LLL V EMKGCR+V KICLGASV VCML+YS P R +ALRNSVLFLGHRFPNVRKT AEA+YLKLLANED+VDEAVY+EALDILTCTAWDGDLQ AK ARSALA+LL VSVP KKAGA A +G PRK DEMESYESLVRTVGY Sbjct: 106 KLSEKLDSVRERAGTVLQKLVQSDDPQLPFVPERAAVKHAITHGAATPAA-PGAAGEEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKGNPRIVVPLLKTLELLLSNECFDSLPAEEHPFAELLLVAVVAEMKGCRNVGKICLGASVLVCMLNYSDPVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEDVVDEAVYEEALDILTCTAWDGDLQTAKDARSALAQLLGVSVPTAAANKKAGAGTGDAAAKGGGNPRKADEMESYESLVRTVGY 435
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE) HSP 1 Score: 399 bits (1025), Expect = 5.090e-120 Identity = 231/335 (68.96%), Postives = 246/335 (73.43%), Query Frame = 1 Query: 1 KVSYALPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDG-------WCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANR 984 +VSYALPAETVAGLV +VPALEKARLYRGRGGELMRQAACR+VECLAL KS+V IK+QLRLLDSVDESLRHAVE VQLSA AALKAVL+NWFPVGRDGPSERLRTRT+GLYV GLR +ENAAVARGYAMALGVLPRKLAG S A+L EVLDALKDAALGRHGP P EPDAETRRNAVRSL LCEEVGV + + XXXXXX G +G WCPA LTL DVEGVLATLLA++EDYSVDKRGDVGSWCRV+AL GME LLRLAARASRGLPLANR Sbjct: 619 QVSYALPAETVAGLVSIVPALEKARLYRGRGGELMRQAACRLVECLALAKSEVSIKSQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVGRDGPSERLRTRTIGLYVGGLRTQENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKDAALGRHGP--PRSPSPATTGGGAANGTTETNGGGDIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQXXXXXXXXXXXXSQEPGSGEGRHDSGGVSSGGSGVDAPEGESGAAAAWCPAWLTLADVEGVLATLLASSEDYSVDKRGDVGSWCRVEALEGMERLLRLAARASRGLPLANR 951
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA) HSP 1 Score: 357 bits (915), Expect = 1.560e-101 Identity = 282/785 (35.92%), Postives = 364/785 (46.37%), Query Frame = 1 Query: 16 LPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQL-RLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQERLALLDQ---------PPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAI-THGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARG--------------------------NPRVVVPLLKTLEFLLSNECFDSLPAEEHP-FADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVD-----------------------------------EAVYDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVPKKAGAXXASADGQGPR----KPDEMESYESLVRTVGY 2139 LP + A + VPALE+A LYRGRGGE +R AACR+ EC AL+ + QL RLLD+ DE LR EDVQ +A AA +A+L+ G E L R V +V GL A ARG+A+ALG LPR LA A VL AL AA G R E DAETRRNAV +LA +CE VG G AGLT D V A LL A +DY DKRGDVGSWCRV A+ +E + RLA ASRG+PL + PP L+PAL R + PP + + TP V+ A+LKQLSEKLD+VR+ AG LQRL+ + P +P++P RP ++ A+ GAA +WAS FP + L++P Y A+ AGLV+SVGGL+ESVV QS+ +LL W RA ++ + AV+ L LV + G RV +P L+TL+ LL+N+ F LPA LLA ++GCR V K+C GA + + + ALR++V L RFP+VR+ AE +Y++LLA ED D EA+ DEAL+IL+CTAWDG L+ A+ AR +A L V + +AG+ SA G G + DE+ YESLVR VGY Sbjct: 697 LPPQLSAAVADAVPALERANLYRGRGGEAVRAAACRLAECAALSDAVELTAPQLVRLLDTCDECLRQVSEDVQRAAAAAARALLRRACAGGAGAADEALFERAVAAHVRGLAEAAAPAEARGHALALGALPRPLAARDAAARARVLTAL--AAACAPGAR-----------------------------VGGEGDAETRRNAVAALAAVCETVGFGVSGGGGG----------------------------------------AGLTAADAAAVFAALLRATDDYGTDKRGDVGSWCRVAAMHALERMARLAVAASRGIPLERAPAAAATAPP-------LVPALSGRQPFMQVAVVNGAVAVPPRARRRAAAAAEAYWTPVDAAAVVRALLKQLSEKLDAVRDHAGQALQRLLAARAPAIPYIPLRPQLEAALGVRGAAPPP--------------NWASAADAFPRIARALSLPSYQSAVAAGLVVSVGGLTESVVKQSAAALLAWARAAGAA-DPSAVSQLGATLVALLNGCNAAAXXXXXXXXXXXXXXXXXXXXGSGDRDRVALPALRTLDLLLANDAFAPLPAPARARLGAELLAAARGALRGCRFVAKLCAGAGALMGLAAWPDGVGRGALRSAVALLAQRFPHVRRHVAELMYVRLLAWEDAEDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSPEAL-DEALEILSCTAWDGALEAAREARDGVAAALGVPL---LRAGSRRGSASGGGXXXGGAEADEL-GYESLVRDVGY 1383
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A7S3Q9K5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9K5_9STRA) HSP 1 Score: 307 bits (787), Expect = 3.970e-84 Identity = 231/736 (31.39%), Postives = 367/736 (49.86%), Query Frame = 1 Query: 25 ETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQERLALLDQPPAPVPS---------------PHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQL-PFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAV----DWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDS-LPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYS-GPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEAVYDEA-LDILTCTAWDGDLQ---EAKTARSALAKLLEVSVPVPKKAGAXXASADGQGP------RKPDEMESYESLVRTVG 2136 E +A + +V A+EKARLYRGRGGE+MR A R++EC+AL + + +K Q+ LLDS+D +L+H E +Q++A +AL ++++++FPV GPSERL++R V YV +R +EN A RGY++ALG LP KL + L+ V+D L + H + DAETRRN+++SL R+C+ VGV G S A V DG V V L A EDY+ D+RGDVGSW R++A+ GME L L +AS +P G + E P +P++ RL L+ A V + + Q + +V +V+ ++LKQLSEKLD+VR +AG+ L+R++ + PFVP + + A+ R + +W++P TFP+++ + + + ++I+AG++ISVGGL+ES+ SSK+L+ ++RA + + +A + L+ +F+ + RV++PLL T++ LLS+ D+ L + + F+ L V +E C D++++ V + +L + L + L H+FP VR+ TAE LY+KL+ +E +V A EA D+L+ +WD +L + R+ +A L + + + D GP + D+ ESY SLV T G Sbjct: 811 ELIASISDLVFAIEKARLYRGRGGEIMRAAVSRLIECMALAQVPMNVKQQIGLLDSLDANLKHPNEIIQVAASSALYSLMRSYFPVRESGPSERLQSRVVDKYVESVRGDENPAATRGYSLALGYLPAKLLAPTVEGLDAVIDCL---CVSSH----------------------------PSTLIGGQGDAETRRNSIKSLVRICQVVGV-----GISADANPSYPT-----------------------VAMDG--------SQVMRVFKALFDAVEDYNTDRRGDVGSWSRIEAMKGMEALTYLVIKASN-IPHTMSCGPEENENTKDVP---CVPSIARRLRYLE---ADVSTRVRSCLSESKPFRQFSYSSTQTYFDDELVSKVLSSILKQLSEKLDAVRGQAGSCLERMLSEKTSIIVPFVPSKALLLEAL-----------------RLNDIPLQHNWSNPAVTFPLMMKAINIEAFFESILAGMIISVGGLTESITKSSSKALMDYMRALHKIKAVGKIAKIGHGLIKLFDKHTKDGRVILPLLVTVDKLLSHGLLDAILVSPTNDFSKDLSLRVRREASRCNDIKRLMAIVPVALSILHCEVAETQNTTLLFLMRLLAHKFPRVRRHTAEQLYIKLVEDESVVPNATNIEAGNDLLSQASWDRELGPPGNVRAYRNQVANFLGIEL----------SEKDLSGPVMKKVVKVKDDFESYASLVSTAG 1445
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: B8BSV8_THAPS (Tubulin-specific chaperone d (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSV8_THAPS) HSP 1 Score: 295 bits (755), Expect = 8.190e-81 Identity = 218/664 (32.83%), Postives = 319/664 (48.04%), Query Frame = 1 Query: 49 VVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSLPA-EEHPFADLLLATVAKEMKGCRDVRKICLGASV-FVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIV--DEAVYDEALDILTCTAWDGDLQEAKT---ARSALAKLL 2019 +VP++EKARLYRGRGGE+MR AACR +EC++ + +K Q+RLLDSVD L H E +Q SA AL A+L ++FPV GPSERL++R V Y++ +++E+N A RG+++ALG LP KL S +L+ VLD L A+ E DAETRRNA+ SL +C+ G+ SS A LT E V A LL+A EDY++D+RGDVGSW RV A+ G+E L L+ A F + ++ A+LKQL EKLD+VR AG L+RL+ +N+P+LPFVP R + A+ +QG +W++P TFP+++ + + + D I++GLVISVGGL+ESV SS SL WIR +S++ + + +G+F+ + N RV++PLL TL+ LLS+ D L + ++ F L+ ++ E KGC DV+++ V F + + + AL + L + +P VR+ AE L+ KL + D + D +EA +L W + T AR+ +A LL Sbjct: 617 LVPSIEKARLYRGRGGEIMRAAACRTIECISTANITLTVKQQVRLLDSVDACLVHPNETIQNSAAKALLALLTSYFPVSSKGPSERLQSRVVDKYISIVKSEDNPAATRGFSLALGHLPGKLLAPSEQVLDSVLDCLIHAS-------------------------------KKSTLVGGEGDAETRRNAILSLINVCKTAGIGH----SSLEANLSPTNS--------------------------------LTTCQTERVFAALLSAMEDYNMDRRGDVGSWSRVAAMNGLEALTYLSYSAK----------------------------------------------------FFDEGLCCSILSALLKQLGEKLDAVRCEAGECLERLLTNNNPRLPFVPHRTMLIRALD--------------LNKQGK-NWSNPAMTFPLLMCAINIDVFLDPILSGLVISVGGLTESVSKSSSASLFEWIRDLRSAKATSKLYQMGEVFLGLFDKNKRNGRVLLPLLATLDKLLSHGYMDELLSRKDGAFLSCLMICLSNESKGCSDVKRLLAIVGVSFNVIQPHLETMKEMALPFIMTMLLNSYPRVRRYVAEQLFAKLSVDGDALFDDHECLEEANQLLLSVVWHDEHDPCGTITEARNRIADLL 1146
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A4D9D438_9STRA (TFCD_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D438_9STRA) HSP 1 Score: 264 bits (674), Expect = 1.600e-69 Identity = 247/831 (29.72%), Postives = 357/831 (42.96%), Query Frame = 1 Query: 16 LPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDA--LKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGV---AGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGL-----------------PLANRGGD---------------------DSAEPPGQAPEHF--------LLPALQ-ERLALLDQPPAPVPSPHPCDQV------------------FLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIR----------------ACKSSRNLRA-VAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECF--------------DSLPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLD--------YSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEA--VYDEALDILTCTAWDG-DLQEAKTARSALAKLLEVSV-----------PVPKKAGAXXASADGQGPRKPDEMESYESLVRTVGY 2139 LP ET+ +V +VP +E+ARLYRGRGGEL+R AACR++ECLAL + +KTQLRLLDS+DE+LRH + V+ A+AA++A +F G D PS R++ R V Y + +EN A+ RG+ ALG LP +L S L + ++ D +G EPDAETRRN + +L + E +GV GE +G+ G+ V +++ LL +DY++DKRGDVGSW R+ AL G+E + L R GL PL R GD + A PPGQA + L P + L++ D+ V ++P + ++ AVLKQL EKLD+VRE AG VL + LP + A + AA + AEG + + +P VV LL V YH+AIVAGLVISVGGL+ESVV S +++ W R ACK + + + L+G+F+ RGN RV++PLL++L+ D A + + L + +E+ GCR+V K+ V + +L A ALR +L LGHRFP VRK A+ LY LL ++ ++ + L+ L AW+ DLQ R + +L ++ V + G+ +G G +E+ SY +LV+ +GY Sbjct: 697 LPGETLKAVVAIVPRIEQARLYRGRGGELVRAAACRLIECLALALVPLSVKTQLRLLDSLDENLRHPTDAVRAHAVAAIRAFTHAYFGRGMDEPSARVQARVVDKYRRLVETDENVALTRGFLRALGALPSRLLFPSFPALLDTIETQLAPDRRVG------------------------------------DEPDAETRRNGILALGEMAETLGVEVSGGERKGAR-----------------------------------------GMNRAQVHRLISLLLKGTDDYAMDKRGDVGSWVRMAALQGLEKTVTLVRRGGGGLTGGAVEDSREGWQDGQRPL--RVGDWVLTTHGRGQVRDLRCNEHLCEIAFPPGQAGAYLFPYGPGCGLFPRQSCQPLSVSDEVKDARTDDAAATAVGTASIGDAEVARFASSTSLISPELTTAIVSAVLKQLCEKLDAVRECAGRVLSTI-------LPLARDAEAYSTLL---AAFLSEAEGGFS------LKGGDSAAVYPRVVRLLGVRAYHEAIVAGLVISVGGLTESVVKASVAAVVEWARQQRLSKRERQEECRSNACKDGHKMPPRLQEFSESLLGLFDAHRGNDRVIMPLLRSLDLFYQKGVLVPRAQAAGWEVGSEDGKHAGKASLSWRLADRLLREVTGCRNVTKLLACLRVALHLLSPLTFRAGQEEEEAGAAALRLVLLLLGHRFPRVRKLAAQELYTALLLHDHLLAGGGDAQERVLEALLGAAWEEEDLQALCGVRDEICAVLVLAPLGAGGTLGAGGTVVSRRGSDEGGREGAG----EELASYAALVKEMGY 1428
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A8B8QXP2_9MYRT (tubulin-folding cofactor D isoform X2 n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A8B8QXP2_9MYRT) HSP 1 Score: 260 bits (664), Expect = 2.650e-69 Identity = 214/712 (30.06%), Postives = 333/712 (46.77%), Query Frame = 1 Query: 10 YALPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQ-ERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSLPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEAVYDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVPKKAGAXXASADG-QGPRKPDEMESYESLVRTVGY 2139 Y LP + + G++PA+EKARLYRG+GGE+MR A R++EC++L+ VP K LLD++ E+LRH +Q +A+ ALK +F G GPS+ +Y+ L + +N AV RG A+ALGVLP + ++VL L A P + DAE R NAV+ L +CE + E +S A L L + V+ +L A +DYS+D RGDVGSW R A+ G+E + + SA P G EH LP L + L D ++ ++ ++ ++KQ EK+D +RE A TVLQR++ + + +PF+P R ++ I + ++G + W P ++P V LL V Y +V+GLVIS+GGL +S+ S+ +LL +++ + L+ ++ + E R RV+ P LKT+E L S F ++ A F + LL ++A E+KG +D K+ G ++ + S P +RA + + FLGHR+P +RK +AE +YL LL D+V E ++AL+I++ T W+GDL+ AK R L ++ + + + K +G + DE SY SLV + G+ Sbjct: 400 YPLPDDKQKKVAGIIPAIEKARLYRGKGGEIMRAAVSRLIECISLSHLLVPKKIIRSLLDTLSENLRHPNSQIQNAAVRALKHFTVAYF--GDGGPSD-----ATTMYLDQL-SNQNVAVRRGCALALGVLPYQFLATK---WKDVLIKLSGACAIEDNPE--------------------------------DRDAEARVNAVKGLISVCETL--TQEREQASALAEEDVMS---------------------------------LYLLIKKEVMMSLFNALDDYSIDNRGDVGSWVREAAMDGLERCTYILCKRD--------SLSSSARPLGV--EH--LPNLSNDELVENDS------------RLLFDTNLATTLVAGLVKQAVEKMDKLREAAATVLQRVLYNREIFVPFIPHREKLEEIIPN---------------KKG-LKWGVPTFSYPRFVQLLQVSCYSKPLVSGLVISIGGLQDSLRKASTSALLEYLQGEDNDTRKSREYILSSDVLWVLEQYRKCDRVITPTLKTIEILYSKRIFLNMQAHTSLFCNGLLDSLAIELKGSKDFTKLYSGIAILGFIASVSEPVNSRAFSHLLTFLGHRYPKIRKASAEQIYLVLLQGGDLVSEDKMEKALEIISETCWEGDLETAKQQRLQLFEIAGLEMGINLKTHTVRLKNEGLKQATSTDENASYSSLVDSTGF 993
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A1Y1IDY3_KLENI (Beta-tubulin folding cofactor D n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDY3_KLENI) HSP 1 Score: 262 bits (669), Expect = 5.470e-69 Identity = 240/753 (31.87%), Postives = 339/753 (45.02%), Query Frame = 1 Query: 16 LPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRT-RTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXD------GGVDRDGWCPAGLTLGDVEG-VLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIR---------ACKSSRNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSL--PAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIV--------------DEAV------YDEALDILTCTAWDGDLQEAKTARSALAKLLEVSVPVPKKAGAXXASADGQGPRKP------DEMESYESLVRTVGY 2139 L +E A + GVVPA+EKARLYRG+GGE+MR A CR++E A +PIKT L S+ ++L+H D+Q SA +AL A F PS+ R RT Y A +R + N A RG A+ALG LP+ L + +EVLD L A + + P E DAETR NAVR+LA +CE +G+ GS + + R+ +GL +G V G V+ LLAA +DY+ D RGDVGSW R A+ +E + L + GG+ E F + + C+ TP + RV+ + KQ +EK+D VR AG+VLQRL+ ++P + +P ++ I A ++WA P TFP+ V LLA + A++AGLVISVGGL++S+ S+ +LL +++ A + + G A G+F+ G RV+VP LKTL LL + L PA+ H A +L +V E++GC+D+ K+ G V P R+ AL+ + LG+R+P VR AE LY LL ED+ EA+ + A D+L T W + E K R L LL+V PV G+ ASA G R+ DE E+Y +LV GY Sbjct: 661 LTSEMQASVGGVVPAIEKARLYRGKGGEMMRGAVCRLIERTAHVGLPLPIKTLKLLEGSILDNLQHPTPDIQASAASALSA-----FAAAYLLPSKPERVNRTTLKYAAIIRDDPNPAAKRGCALALGALPKPLLNP---VWKEVLDTLCGATVLQANPE--------------------------------ERDAETRVNAVRALAVVCETLGLETRENGSMPVSTSGSQNESGTQSVAGTVNGNPDGQKRETLALGESSTQRE---DSGLPVGVVSGQVMEHLLAALDDYATDNRGDVGSWVREAAMESIEKVTYLLCHVAASETCHVAGGEAVKEIDENG---FSTSGSGKEVK--------------CNGDAFTPELAARVIAGLAKQAAEKIDRVRNVAGSVLQRLLARSNPPVAAIPHGGVLRGIIPADAV----------------INWAVPSQTFPLTVQLLAFRPFRSALLAGLVISVGGLADSLGKASASALLDFLQTRGSIQLDEADRGDSGEELLNGFADAFKGLFDSDAGLDRVIVPALKTLAILLEDRTLQKLQLPAKLH--ARGILDSVGTELRGCKDIPKLLAGVDVLCSFARLPDPDRSAALQQLLGLLGNRYPKVRMQCAEKLY-DLLYIEDLTRAEEIAESLPAGPEQEALRSRIADLEAACDLLLETKWSSPVNEIKDKRDGLFCLLKVEKPVAV-VGSVAASA---GVRRKVEVKFRDENETYGALVDDAGY 1330
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Match: A0A059C4C2_EUCGR (TFCD_C domain-containing protein (Fragment) n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059C4C2_EUCGR) HSP 1 Score: 256 bits (655), Expect = 1.810e-68 Identity = 215/718 (29.94%), Postives = 335/718 (46.66%), Query Frame = 1 Query: 10 YALPAETVAGLVGVVPALEKARLYRGRGGELMRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALKAVLKNWFPVGRDGPSERLRTRTVGLYVAGLRAEENAAVARGYAMALGVLPRKLAGGSRAILEEVLDALKDAALGRHGPRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDAETRRNAVRSLARLCEEVGVAGEPRGSSCAAXXXXXXXXXXXXXXXXXXXXXXDXXXDGGVDRDGWCPAGLTLGDVEGVLATLLAAAEDYSVDKRGDVGSWCRVDALAGMEGLLRLAARASRGLPLANRGGDDSAEPPGQAPEHFLLPALQERLALLDQPPAPVPSPHPCDQVFLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQRLVQSNDPQLPFVPERPAVKHAITHGAAAAAAAEGSAAAERQGAVDWASPRTTFPMVVGLLAVPEYHDAIVAGLVISVGGLSESVVAQSSKSLLRWIRACKSS---RNLRAVAGLALRLVGMFEGARGNPRVVVPLLKTLEFLLSNECFDSLPAEEHPFADLLLATVAKEMKGCRDVRKICLGASVFVCMLDYSGPARTRALRNSVLFLGHRFPNVRKTTAEALYLKLLANEDIVDEAVYDEALDILTCTAWDGDLQEAKTARSALAKL--LEVSVPVPKKAGAXXASADGQGPRKP---DEMESYESLVRTVGY 2139 Y+LP + + G+VPA+EKARLYRG+GGE+MR A R +EC++L+ VP K L D++ E+LRH +Q +A+ ALK +F G GPS+ T L + N AV RG A+A+GVLP + ++V+ L A P + D E R NAV+ L +CE + + R S A L L + V+ +L A +DYSVD RGDVGSW R A+ G+E + + S P G EH + E L+D + ++ ++ ++KQ EK+D +RE A TVLQR++ + + +PF+P R ++ I + ++G + W P ++P V LL Y ++V+GLVIS+GGL +S+ S+ +LL +++ + RN L+ ++ + E R RV+ P LKT+E L S ++ A F + LL ++A E+KG +D K+ G ++ + S PA +RA + ++FLGHR+P +RK +AE +YL LL D+V E ++AL+I++ T W+GDL+ AK R L ++ LE+++ + K A + +G +KP DE SY SLV + G+ Sbjct: 324 YSLPDDKQRKVAGIVPAIEKARLYRGKGGEIMRAAVSRFIECISLSHLLVPKKIIRSLFDTLSENLRHPNSQIQNAAVKALKHFTVAYF--GDGGPSDATTTYLDQL------SNPNVAVRRGSALAIGVLPYQFLATK---WKDVIMKLCGACAIEDNPE--------------------------------DRDVEARVNAVKGLVSVCETLT---QEREQSPALAEEDLRS--------------------------------LYLLIKKEVMMSLFNALDDYSVDNRGDVGSWVREAAMDGLERCTYILCK--------RESLSSSVRPCGF--EHSPNLSNDE---LVDNE----------GTLLFDTNLATTLVAGIVKQAVEKMDKLREAAATVLQRVLYNREISVPFIPHREKLEEIIPN---------------KKG-LKWGVPTFSYPRFVQLLQSSCYSRSLVSGLVISIGGLQDSLRKASTSALLEYLQGEDNESLDRNKSREYTLSCDVLWVLEQYRKCDRVITPTLKTIEILFSKRILLNMEAHTSTFCNGLLDSLAIELKGSKDFTKLYSGIAILGFIASVSEPANSRAFSHLLIFLGHRYPKIRKASAEQIYLVLLQGGDLVSEDKMEKALEIISETCWEGDLETAKQQRLQLFEIAGLEMAINLKTKT----ALSKNEGRKKPTSTDENASYSSLVESSGF 920 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig172.4785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig172.4785.1 >prot_L-elsbetiae_contig172.4785.1 ID=prot_L-elsbetiae_contig172.4785.1|Name=mRNA_L-elsbetiae_contig172.4785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=680bp MRQAACRVVECLALTKSDVPIKTQLRLLDSVDESLRHAVEDVQLSAMAALback to top mRNA from alignment at L-elsbetiae_contig172:42015..52243- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig172.4785.1 ID=mRNA_L-elsbetiae_contig172.4785.1|Name=mRNA_L-elsbetiae_contig172.4785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10229bp|location=Sequence derived from alignment at L-elsbetiae_contig172:42015..52243- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig172:42015..52243- >mRNA_L-elsbetiae_contig172.4785.1 ID=mRNA_L-elsbetiae_contig172.4785.1|Name=mRNA_L-elsbetiae_contig172.4785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4080bp|location=Sequence derived from alignment at L-elsbetiae_contig172:42015..52243- (Laminarionema elsbetiae ELsaHSoW15)back to top |