mRNA_L-elsbetiae_contig172.4784.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Match: D8LNX2_ECTSI (Protein phosphatase 2C containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX2_ECTSI) HSP 1 Score: 488 bits (1257), Expect = 1.490e-173 Identity = 240/264 (90.91%), Postives = 249/264 (94.32%), Query Frame = 1 Query: 1 MKEDLAGLGLRLFVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLRMADDLRSCPVDCSSSGATCVLTTIQDGKISVANLGDSKCVLGTLVNGHVCAVALSDDHKPDRPDERQRILAIGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVMEHDIGPGDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGDSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLNV 792 MKEDL GLG+RLFVVLDGHGELGHLVSRRC++K+PNLVV+S VARATLRMADDLRSCPVDC+SSGATCVLTTI+DGKISVANLGDSKCVL LVNG VCAV LS DHKPDRPDERQRILAIGGQVGSRHLVVGS+PSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEV EH I DQFLILATDGVWDVTEIGQAVQIVQGYASRCRG+SWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRL V Sbjct: 18 MKEDLGGLGVRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLTV 281
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Match: A0A835YTT3_9STRA (Phosphatase 2C-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT3_9STRA) HSP 1 Score: 301 bits (771), Expect = 1.430e-98 Identity = 161/282 (57.09%), Postives = 192/282 (68.09%), Query Frame = 1 Query: 10 DLAGLGLRLFVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLRMADDLRS-CPVDCSSSGATCVLTTIQD-GKISVANLGDSKCVLGTLVNG-------------------HVCAVALSDDHKPDRPDERQRILAIGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVMEH--DIGPGDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGDSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRL 786 D G LR+F VLDGHGE GHLV+RRC ++P L+ + ARA + + +DL S VDC SGATCV+ TI G ++VANLGDS+CVLG G VCAV L+ DHKPDRPDER RI A GGQVGSR L+VGS P+GPIRIPMGPARVWY+ RGE MGLAMSRS+GD IAH AGVS++PEV+EH D GD FL+LA+DGVWDV + AV IV A+ G WDP+ AA +ARKRW+GLS ++DDITALVV+L Sbjct: 74 DGGGDRLRVFAVLDGHGEAGHLVTRRCRERLPQLLRAARGDAARACVALHEDLASGVHVDCQCSGATCVVVTISARGAVTVANLGDSRCVLGRWECGGXXXXXXXXXXXMVGRAQRQVCAVPLTTDHKPDRPDERARIQAAGGQVGSRQLIVGSGPAGPIRIPMGPARVWYQVRGETMGLAMSRSIGDVIAHAAGVSAQPEVVEHCLDRDAGDAFLVLASDGVWDVLDAQAAVHIVAACAAAAGGAEWDPREAAXXXXXAARKRWDGLSPMIDDITALVVKL 355
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Match: A0A7S4D964_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D964_HETAK) HSP 1 Score: 287 bits (735), Expect = 9.520e-94 Identity = 140/253 (55.34%), Postives = 183/253 (72.33%), Query Frame = 1 Query: 34 LFVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLRMADDL-RSCPVDCSSSGATCVLTTIQDGKISVANLGDSKCVLGTLVNGHVCAVALSDDHKPDRPDERQRILAIGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVMEHDIGPGDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGDSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLN 789 +F VLDGHG+ GHLVS +C ++P L E+ ++R L M +L +S +D SGATCV+ ++ +++V NLGDSK VLG VNG L++DHKPDRPDERQRIL GG+VG R LVVG+ P+GP+R+PMGP R+WY+ RGE MGLAMSRSLGD I H GVS++PE+ EH + D FL+L +DG+WDVT++ QAVQIVQG ++ WDP+ AA LA SAR+RWE +S +VDDITA+VV+L Sbjct: 59 MFCVLDGHGQQGHLVSTQCRERLPQLYRETGNDLSRTCLAMQAELEKSTAMDVKCSGATCVICVVEGRRLTVGNLGDSKAVLGRRVNGVTLPHPLTNDHKPDRPDERQRILQAGGKVGCRQLVVGNGPNGPVRLPMGPMRIWYQVRGETMGLAMSRSLGDGIVHALGVSADPELTEHLLDGEDLFLLLGSDGIWDVTDLNQAVQIVQGVVNK-NPHGWDPREAAEELAVSARRRWESMSQMVDDITAIVVKLQ 310
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Match: A0A7S2WTT9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTT9_9STRA) HSP 1 Score: 271 bits (692), Expect = 1.380e-85 Identity = 136/257 (52.92%), Postives = 172/257 (66.93%), Query Frame = 1 Query: 28 LRLFVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLRMADDLRSCPVDCSSSGATCVLTTIQDGKISVANLGDSKCVLGTLVNGHVCAVALSDDHKPDRPDERQRILAIGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVMEHDIGPGDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGDS---WDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLN 789 L + V DGHGE GHLVSR ++ + +E + +RA +M +L VD SGATCV+ ++ I V N GDS+ VLG NG + A+ L+ DHKPDRPDER+R++ GGQVGSR LVVG + +GP+ +P+GP RVWY+ RGE MGLAMSRSLGD IAH GVSSEPEV EH + D F+ILA+DG+WDV E QAVQIV + +R WD AA +L +AR+RWE LS +VDDITA+VV L Sbjct: 176 LHAWGVFDGHGEFGHLVSRIIRERLGKIWLECSQNFSRAFWQMQSELDKSSVDARCSGATCVMVVLRGNTIQVGNCGDSRAVLGRRSNGTISALQLTSDHKPDRPDERRRVMQAGGQVGSRQLVVGHNANGPVTLPLGPPRVWYQIRGETMGLAMSRSLGDGIAHSNGVSSEPEVTEHAVSSTDVFVILASDGIWDVIETNQAVQIVGNHFARATASGSTQWDVVDAAMVLTTTARRRWESLSPMVDDITAVVVDLR 432
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Match: A0A7S3ZZR6_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZR6_9STRA) HSP 1 Score: 264 bits (674), Expect = 7.250e-83 Identity = 135/256 (52.73%), Postives = 172/256 (67.19%), Query Frame = 1 Query: 31 RLFVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLRMADDLRSCPVDCSSSGATCVLTTIQDGKISVANLGDSKCVLGTLVNGHVCAVALSDDHKPDRPDERQRILAIGGQVGSRHLVVGSSPSGPIRIPMGPARVWYR---CRGEIMGLAMSRSLGDDIAHQAGVSSEPEVMEHDIGPGDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGDSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLN 789 R + VLDGHGE+GHLVS+RC+ ++ V+S ++ A M +DL C +D SGATCV + D + VAN+GDS+ VLG L ++CA L+ DHKPDR DE+ RI+A GGQV R LVVG S +GPI +P+GP RVWYR G+ MGLAMSRS GD IAH GVS EPE+ ++++ D+FLI ATDGVWDV + QAV+IV R + WDP AA L SAR RW+ LS ++DDITALVV L+ Sbjct: 158 RCYGVLDGHGEIGHLVSKRCSQQLCEHFVKSQLDMSLAFRLMQEDLSQCELDIKCSGATCVFVHLHDSYLRVANIGDSRGVLGHLDGANICATPLTSDHKPDRHDEQIRIVACGGQVSCRQLVVGHSSNGPITLPLGPPRVWYRRNSSHGDTMGLAMSRSFGDAIAHGLGVSCEPEITQYNLDLADKFLICATDGVWDVIDNAQAVKIVHTLYER--SNDWDPLEAAHTLCISARNRWQSLSPMIDDITALVVDLH 411
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Match: A0A482S1K4_9ARCH (Protein serine/threonine phosphatase 2C family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1K4_9ARCH) HSP 1 Score: 258 bits (658), Expect = 1.840e-80 Identity = 126/261 (48.28%), Postives = 175/261 (67.05%), Query Frame = 1 Query: 10 DLAGLGLRLFVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLRMADDLRSCPVDCSSSGATCVLTTIQDGKISVANLGDSKCVLGTL-VNGHVCAVALSDDHKPDRPDERQRILAIGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVMEHDIGPGDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGDSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLN 789 +L LR++ VLDGHGE GH+VS+RC P+ + + + V A M +DL S +D SGATCV+ + + +++V N GDS+ VLG +G + A LS+DHKPD+P+ER+RIL GG +G R ++V GP+ +P+GP RVWY+ RGE +GLAMSRSLGD I H+ GV++EPE+ EH I D+F+ILATDGVWDV + AVQ+V G ASR +W A++ + AR RWE LS +VDDIT +VV+++ Sbjct: 177 ELPDRDLRVYCVLDGHGEHGHIVSKRCRENFPHFLKSTNWQVEAAFNMMQNDLTSSEIDVRCSGATCVIACVSNNRLTVYNCGDSRAVLGRRSASGAIAAYPLSNDHKPDKPEERKRILGCGGHLGCRQVLVNQGNRGPVSMPVGPCRVWYQHRGETLGLAMSRSLGDSIVHKVGVTAEPELTEHQIDDHDEFIILATDGVWDVVDNNHAVQMVFGVASR--SVNWSVLEASNAVCRFARSRWEKLSPMVDDITCVVVKIH 435
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Match: A0A7S1U9X7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9X7_9STRA) HSP 1 Score: 256 bits (653), Expect = 6.390e-78 Identity = 132/284 (46.48%), Postives = 173/284 (60.92%), Query Frame = 1 Query: 34 LFVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLRMADDLRSCPVDCSSSGATCVLTTIQDGK--------ISVANLGDSKCVLGTLVNGHVCAVALSDDHKPDRPDERQRILAIGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVMEHDIGPGDQFLILATDGVWDVTEIGQAVQIV------------------------QGYASR-CRGDSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRL 786 LF V DGHGE GHLVSR+C ++P ++ + + A D +SC VDCS SGAT V+ I + + + N GDS+ V+ +VN + V L+ DHKPDRPDER+RI A+GG+VG+R +VVG P+G I +P+GPAR+WY CRGE MGLAMSRSLGD IAH+ G S EPE+ ++ D FL+LATDGVWDV + AV I G++S R WDP+ AA + +AR+RWE LSA+VDDIT +VV+L Sbjct: 316 LFAVFDGHGEFGHLVSRKCREEMPQRLISNRLDMGAAFDEAQDHFKSCEVDCSCSGATAVVIIIDNATRGRGGSSTLRIGNCGDSRAVVARVVNNTITGVTLTKDHKPDRPDERRRITAMGGKVGTRQVVVGHGPNGAITMPVGPARIWYNCRGETMGLAMSRSLGDLIAHRVGGSHEPEMTMRNLQEEDMFLLLATDGVWDVLDANAAVDIAFEVMMEAREEAGLGPKRVPMGGAAAGFSSEEWRSIPWDPEVAAKRICTTARRRWENLSAMVDDITCVVVKL 599
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Match: A0A7S2CMF9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMF9_9STRA) HSP 1 Score: 239 bits (610), Expect = 6.110e-73 Identity = 121/255 (47.45%), Postives = 166/255 (65.10%), Query Frame = 1 Query: 37 FVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLRMADDLRSCPVDCSSSGATCVLTTIQDGKISVANLGDSKCVLGTLVNG--HVCAVALSDDHKPDRPDERQRILAIGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVMEHDIGPGDQFLILATDGVWDVTEIGQAVQIVQGYASRC-RGDS-WDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLN 789 ++V DGHG+ GHLVS+ K+ +++ F + L M L VD SSG+TCV+ + + + VAN GDS+ VLG +VN + + L+DDHKPDRPDER R+ GGQVG R +++ S +R+P+GPARVWY RGE GLAMSRSLGD I H GVS EPEV + + ++F+I+ATDG+WDV VQIV + + R +S W+PQ AA +L +AR+RWEG+S +VDDITA+V+ L+ Sbjct: 202 WIVFDGHGDRGHLVSKFGREKMGKTWIDNKFRLRETFLSMQQQLNKSSVDVRSSGSTCVMVVLDNDCLKVANCGDSRAVLGKVVNSSSQLATIVLTDDHKPDRPDERMRVEKAGGQVGCRQMLMNRGSS--VRVPLGPARVWYTNRGETTGLAMSRSLGDAIVHTFGVSEEPEVTQRTLDKTERFIIVATDGIWDVLHSSHVVQIVDKHFNEAARSNSPWNPQDAAMVLCLTARRRWEGMSTMVDDITAVVIDLS 454
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Match: A0A7S2XVV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVV9_9STRA) HSP 1 Score: 209 bits (532), Expect = 2.660e-63 Identity = 103/178 (57.87%), Postives = 127/178 (71.35%), Query Frame = 1 Query: 37 FVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLRMADDLRSCP-VDCSSSGATCVLTTIQDGKISVANLGDSKCVLGTLVNGHVCAVALSDDHKPDRPDERQRILAIGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVMEHDI 567 + VLDGHG+ GHLVS + E V+RA LRM +DL + P +D SGATCV+ ++ + V NLGDS+CVL VNG + VALS+DHKPDRPDERQRILA GG+VG R LVVG+ PSGP+R+PMGP R+WY+ RGE MGLAMSRSLGD I H GVS++PE+ EH + Sbjct: 116 YCVLDGHGQQGHLVSGYIRENLVRHYSECGQDVSRACLRMQEDLDTTPTLDTKCSGATCVIAILRGRSLLVGNLGDSRCVLARRVNGVLSPVALSNDHKPDRPDERQRILAAGGKVGCRQLVVGNGPSGPVRLPMGPMRIWYQVRGETMGLAMSRSLGDSIVHTQGVSADPELKEHQV 293
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Match: A0A7S2NWU1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWU1_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.130e-54 Identity = 98/255 (38.43%), Postives = 147/255 (57.65%), Query Frame = 1 Query: 34 LFVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLRMADDLRSCPVDCSSSGATCVLTTIQDGK-ISVANLGDSKCV-LGTLVNGHVCAVALSDDHKPDRPDERQRILAIGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVMEHDIGPGDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGDSWDPQGAASLLAHSARKRWEGLSAV-VDDITALVVRLN 789 +++V DGHG GH+VS+ C + +P ++ E+ + RA + DL S +D SG TCV ++ + I V N+GDS+ + L N + A+ LS DHKP + DER+RIL GG++ S+H G P+RVW+ MGLAMSRS+GD+ AH+ GVS EP++ H I P D ++LA+DG+WDV + ++Q + D W+ + AA L AR RWE +S +DD+T LV+++ Sbjct: 123 VYMVFDGHGRFGHVVSKHCKAVLPKILAETGYDQERAISVLQSDLESSAIDIECSGCTCVTAIVKQNRTIEVGNVGDSRAIILQRSPNNTLKALPLSIDHKPSQLDERKRILETGGRIASKHCSAG------------PSRVWFEYNNTTMGLAMSRSVGDEFAHRVGVSHEPQIFHHKIEPQDTCIVLASDGLWDVYSNDEVAHLIQTCINGNYAD-WNAKIAAVFLTKMARMRWEHISTEHIDDVTCLVIKIE 364 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig172.4784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig172.4784.1 >prot_L-elsbetiae_contig172.4784.1 ID=prot_L-elsbetiae_contig172.4784.1|Name=mRNA_L-elsbetiae_contig172.4784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp MKEDLAGLGLRLFVVLDGHGELGHLVSRRCASKIPNLVVESTFGVARATLback to top mRNA from alignment at L-elsbetiae_contig172:37375..40572+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig172.4784.1 ID=mRNA_L-elsbetiae_contig172.4784.1|Name=mRNA_L-elsbetiae_contig172.4784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3198bp|location=Sequence derived from alignment at L-elsbetiae_contig172:37375..40572+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig172:37375..40572+ >mRNA_L-elsbetiae_contig172.4784.1 ID=mRNA_L-elsbetiae_contig172.4784.1|Name=mRNA_L-elsbetiae_contig172.4784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig172:37375..40572+ (Laminarionema elsbetiae ELsaHSoW15)back to top |