mRNA_L-elsbetiae_contig17179.4776.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Match: A0A6H5LM37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM37_9PHAE) HSP 1 Score: 111 bits (277), Expect = 2.060e-28 Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 1 Query: 1 MPAFTHQASPDDPEEALKKELLTLQAQRDALEMEADAIASELKSPGAGGEPAVGVKGPLVDSDGYPLAGVDLFNVRAKRHR 243 P Q + PEEAL+KEL+ LQAQRDALE+EADAIASELKSPGA GE VGVKG LVD+DG+PLAG DLFNVR KRHR Sbjct: 7 QPQQPQQQAIPSPEEALRKELVVLQAQRDALELEADAIASELKSPGANGEAPVGVKGALVDADGFPLAGFDLFNVREKRHR 87
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Match: A0A7S3HBQ7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBQ7_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 6.850e-15 Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 1 Query: 43 EALKKELLTLQAQRDALEMEADAIASELKSPGAGGEPAVGVKGPLVDSDGYPLAGVDLFNVRAKRHR 243 E L+ L L AQRDALE EADAI SEL SPG GEP G+K P VD++GYP +D+ NV+ KR R Sbjct: 12 EILRGTLNNLSAQRDALEAEADAIHSELTSPGINGEPPAGIKTPFVDAEGYPRGDIDIINVKDKRRR 78
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Match: A0A482S8P2_9ARCH (Nas2_N domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8P2_9ARCH) HSP 1 Score: 71.2 bits (173), Expect = 2.980e-13 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 49 LKKELLTLQAQRDALEMEADAIASELKSPGAGGEPAVGVKGPLVDSDGYPLAGVDLFNVRAKRHR 243 L++ L TL AQR+ LE+EADAI SEL SPG GEP G+K PLVD++ +P +D++NV+ KR R Sbjct: 7 LRQSLNTLIAQRELLEVEADAIHSELTSPGPNGEPPAGIKDPLVDAEDFPRNDIDIYNVKRKRLR 71
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Match: A0A448ZSK9_9STRA (Nas2_N domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSK9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 7.960e-12 Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 1 MPAFTHQASPDDPEEALKKELLTLQAQRDALEMEADAIASELKSPGAGGEPAVGVKGPLVDSDGYPLAGVDLFNVRAKRHR 243 M + H+ D+PE AL+K L +L AQR A++ EADAI +EL +P G +G+ PLVD +GYP +D++ R++R+R Sbjct: 1 MASTPHEIENDNPETALRKTLASLDAQRTAIQEEADAIIAELTTPPREGVEPMGLDTPLVDQEGYPRGDIDVYRARSQRNR 81
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Match: A0A7S3LKN0_9STRA (26S proteasome non-ATPase regulatory subunit 9 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKN0_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.580e-8 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1 Query: 43 EALKKELLTLQAQRDALEMEADAIASELKSPGAGGEPAVGVKGPLVDSDGYPLAGVDLFNVRAKRHR 243 E L+ + L+ ++ A+E+E AIA EL SPG P VG+KG LVD +G+P A VD+ +R +R+R Sbjct: 6 EQLRAKFAELEEKKKAMEVEISAIAQELNSPGPNKAPPVGMKGNLVDHEGFPRADVDVHAIRLQRNR 72
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Match: A0A7S3LJE4_9STRA (26S proteasome non-ATPase regulatory subunit 9 n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LJE4_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 2.830e-8 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1 Query: 43 EALKKELLTLQAQRDALEMEADAIASELKSPGAGGEPAVGVKGPLVDSDGYPLAGVDLFNVRAKRHR 243 E L+ + L+ ++ A+E+E AIA EL SPG P VG+KG LVD +G+P A VD+ +R +R+R Sbjct: 6 EQLRAKFAELEEKKKAMEVEISAIAQELNSPGPNKAPPVGMKGNLVDHEGFPRADVDVHAIRLQRNR 72
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Match: A0A024G3E9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3E9_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 5.020e-8 Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 55 KELLTLQAQRDALEMEADAIASELKSPGAGGEPAVGVKGPLVDSDGYPLAGVDLFNVRAKRHR 243 KEL L+A++ LE E +I EL S G AVG+KGPLVDS+G+P A +D++ VR +RHR Sbjct: 8 KELDALRAKKTELEDEIASITKELTS----GPMAVGIKGPLVDSEGFPRADIDIYTVRHQRHR 66
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Match: A0A2D4BRX5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRX5_PYTIN) HSP 1 Score: 56.6 bits (135), Expect = 1.890e-7 Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 1 Query: 46 ALKKELLTLQAQRDALEMEADAIASELKSPGAGGEPAVGVKGPLVDSDGYPLAGVDLFNVRAKRH 240 +L +E L Q+DALE E AIA EL S G A G+KGPLVD++G+P A +D++ VR +RH Sbjct: 4 SLMEEYAQLTQQKDALEAEIAAIAEELTS----GPNAPGLKGPLVDAEGFPRADIDVYRVRHQRH 64
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Match: A0A7S0DG52_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DG52_MICPS) HSP 1 Score: 55.1 bits (131), Expect = 2.900e-7 Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 52 KKELLTLQAQRDALEMEADAIASELKSPGAGGEPAVGVKGPLVDSDGYPLAGVDLFNVRAKRHR 243 ++ + ++ A R+A+E E +IA L PGA G+KGPLVD +G+P+ GVDL+ VRA R R Sbjct: 19 RERVTSMYAAREAMETEMASIAGRLSQPGA-----PGLKGPLVDKEGFPIPGVDLYAVRADRGR 77
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Match: A0A7S4VM81_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VM81_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 3.270e-7 Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 1 Query: 52 KKELLTLQAQRDALEMEADAIASEL-KSPGAGGEPAVGVKGPLVDSDGYPLAGVDLFNVRAKRHR 243 ++ LL+L A+R ALEMEA AI EL + P GG P +G+ PLVD DGYP + +D++ R R R Sbjct: 82 RQTLLSLDARRQALEMEASAIIDELTREPEDGGIP-MGIDTPLVDHDGYPRSDIDVYRARTLRKR 145 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17179.4776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17179.4776.1 >prot_L-elsbetiae_contig17179.4776.1 ID=prot_L-elsbetiae_contig17179.4776.1|Name=mRNA_L-elsbetiae_contig17179.4776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp MPAFTHQASPDDPEEALKKELLTLQAQRDALEMEADAIASELKSPGAGGEback to top mRNA from alignment at L-elsbetiae_contig17179:1242..1487+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17179.4776.1 ID=mRNA_L-elsbetiae_contig17179.4776.1|Name=mRNA_L-elsbetiae_contig17179.4776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=246bp|location=Sequence derived from alignment at L-elsbetiae_contig17179:1242..1487+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17179:1242..1487+ >mRNA_L-elsbetiae_contig17179.4776.1 ID=mRNA_L-elsbetiae_contig17179.4776.1|Name=mRNA_L-elsbetiae_contig17179.4776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=492bp|location=Sequence derived from alignment at L-elsbetiae_contig17179:1242..1487+ (Laminarionema elsbetiae ELsaHSoW15)back to top |