mRNA_L-elsbetiae_contig1715.4766.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1715.4766.1
Unique NamemRNA_L-elsbetiae_contig1715.4766.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A6H5KAX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX6_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 1.690e-78
Identity = 172/356 (48.31%), Postives = 219/356 (61.52%), Query Frame = 2
Query:    2 LQLAEGLHTAEIEELAKRVTTVPGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRS----SFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLIWSTP 1057
            L LAEGLHT ++  LAK +  +    LV LAGRQGA ADV+ASRLCV+L IKG++PAV++T N+      +    A +G     + S    S+Q  D  ALG  + ALL + + G   S  N  G  A +  +   G  A + G     DIVVVHGC  LD +LL  +   L PA+A+ VF+D+VPQVCVDN+TPVNGADVR+LR+L+AA     K A++           A +S+GRS    S F    FLE W  AE+REQ   R+F+    V +NTALP+DLN LKP+ EPLLR+V PPT    +G  GGDGCRSS YALSRS+L +L+LCEALHA  +P TSVL  LI   P
Sbjct:  848 LLLAEGLHTDQLGALAKTII-LSNAQLVILAGRQGASADVVASRLCVELTIKGKSPAVVNTQNYRRQEAPEARAEAYMGQSQPHASSSASVSNQQLDLAALGRVVAALLGQDQDGGGFSSGNNSGGLAVSDGNAVAGARATSRGWH---DIVVVHGCSALDADLLSMEDIDLRPAKAIKVFVDVVPQVCVDNVTPVNGADVRMLRALLAARGRLAKTAQAEVL--------AKASNGRSIVKRSNFVAR-FLEKWHVAEQREQGFWRTFQAAADVQINTALPYDLNALKPLVEPLLRSVPPPT----EGSDGGDGCRSSAYALSRSVLHMLQLCEALHA-QLPGTSVLRELIRPRP 1185          
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: D7G8F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F4_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 7.500e-75
Identity = 166/352 (47.16%), Postives = 209/352 (59.38%), Query Frame = 2
Query:    2 LQLAEGLHTAEIEELAKRVTTVPGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLIWSTP 1057
            L LAEGLHT +               LV LAGRQGA AD +ASRLCV+L IKG++PAV++T N+      +    A +G     + S    S+Q  DS ALG  + ALL + + G      N     A +  +   G  A + G     DIVVVHGC  LD ELL  +  GL PA+A+ VF+D+VPQV VDN+TPVNGADVR+LR+L+AA   + K  ++        + G+  +    S FD   FLE W   EEREQ L  SF+    VH+NTALP+DLNVLKP+ EPLLR+V PP     +G  GGDGCRSS YALSRS+L +L+LCEALHA  +P TSVL  LI   P
Sbjct:  893 LLLAEGLHTDQ---------------LVILAGRQGASADAVASRLCVELAIKGKSPAVVNTQNYRCPEAPEARAEAYMGQSQHHASSSASVSNQQLDSRALGRVVAALLGKDKDGGGFPSGNNNSGGAVSDGNAVAGARATSRGWH---DIVVVHGCSALDAELLSMEDIGLRPAKAIKVFVDVVPQVSVDNVTPVNGADVRMLRALLAAGGGFAKAVQAEVLA----NAGSVRNIAERSNFDVASFLEEWHVTEEREQGLWWSFQAAADVHMNTALPYDLNVLKPLVEPLLRSVPPPI----EGSDGGDGCRSSAYALSRSVLHMLQLCEALHA-QLPGTSVLHELIRPRP 1217          
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A800BUV2_9BACT (Nucleoside kinase (Fragment) n=1 Tax=Candidatus Bipolaricaulota bacterium TaxID=2306012 RepID=A0A800BUV2_9BACT)

HSP 1 Score: 80.9 bits (198), Expect = 4.240e-13
Identity = 93/348 (26.72%), Postives = 134/348 (38.51%), Query Frame = 2
Query:    8 LAEGLHTAEIEELAKRVTTVPG-VLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAV-SVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045
            + E LH+  I E+A  +   P  V +V +AG   +     + RL VQL   GR P  L   ++   R    H          +   P     +  D   L   L+ LL   R      D  RG S           LG +   R++   I+++ G   L+  L+P       P E++  +++  V Q+ +D LT V   D RL+R +V   +    DAE                            LE W +    E+R    ++       N+ALPH+L VLKP+AEPLLR V P                S  Y  +R +LRLL   +      VP  SVL   I
Sbjct:    3 VGEALHSQRIAEIAAEICARPEPVRVVLIAGPSSSGKTSFSRRLAVQLLANGRRPFPLSLDDYFLPREDSPHD---------MEGRPDFEVLEALDLELLNKQLLDLLAGKRVTLPRYDFLRGQSE----------LGPSIRLRREH--ILLIEGLHGLNPALVPKV-----PEESIFRIYVSAVAQLRLDRLTRVPTTDTRLIRRIVRDARERGSDAEMT--------------------------LEQWPSVRRGEERYIFPYQENADAMFNSALPHELAVLKPLAEPLLRQVEPD---------------SPRYPEARRLLRLLSWVQGAPKELVPEESVLREFI 283          
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: UPI0016459452 (nucleoside kinase n=1 Tax=Megasphaera hominis TaxID=159836 RepID=UPI0016459452)

HSP 1 Score: 62.4 bits (150), Expect = 1.580e-6
Identity = 72/349 (20.63%), Postives = 131/349 (37.54%), Query Frame = 2
Query:    2 LQLAEGLHTAEIEELAKRVTTV-PGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045
            + +AE L   ++ ++A  +    PG+ +V +AG   A       RL  QLR+ G  P  +   ++ ++R               +     P  +Q  D ++ G  +     +  +G    D                      E  Q     +VV G   L++ L     + L   E V + + ++ Q+ +++   ++ +D R++R LV  H+   +  ++                           LE W      E+     ++       NTALP++L+VLKP AEPLL +V P                +  YA ++ +L  L+   ++ A  VP  S+L   I
Sbjct:  261 IDMAEALQEKKLGQIADYIVNQKPGIKVVLIAGPSSAGKTTFCKRLTTQLRVVGLRPVRISLDDYFYNREDTPRNPDGSYDFESLRAIDVPLFNQQIDDLSQGKEVYLSRFDFVTGQRHFDEKP----------------TVLEANQP----IVVEGLHALNDSL----TYMLPRYEKVKISLGVLTQIRINDHNRISTSDTRIIRRLVRDHQFRARGPQAT--------------------------LEIWSDVRRGEETNIYPYQEDADTIFNTALPYELSVLKPFAEPLLASVEPD---------------NPYYAEAQRLLLFLKPFRSVDASVVPNNSLLREFI 544          
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: UPI001A0601F3 (Nucleoside kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=UPI001A0601F3)

HSP 1 Score: 62.4 bits (150), Expect = 1.630e-6
Identity = 77/304 (25.33%), Postives = 112/304 (36.84%), Query Frame = 2
Query:    8 LAEGLHTAEIEELAKRVTTV-PGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVV----HGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLV--AAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPT 898
            ++E LH   I ++A ++      V LV +AG   A     + RL VQL   G  P  L   N+  DR                    P   H H D  AL    V+L  +      L  + RG        +  TG     E  Q   D +++    HG  P     +P ++       A  +FI  + Q+ +D    V   D RL R +V  A ++ YT +                              L  W +    E+R     +    V  N+AL ++L VLKP+AEPLL  V PP+
Sbjct:  279 VSEALHEQRIAQIADQIARQWSEVRLVLIAGPSAAGKTTFSKRLSVQLLAHGIRPFPLAMDNYFVDREKT-----------------PRDEHGHYDFEALSALDVSLFNQ-----HLLALMRGEEVQIPRFNFTTGQREKGEAVQLGPDHIIIVEGIHGLNPRLVSSVPRER-------AFRIFISALTQLNIDRHNRVPTTDTRLARRIVRDATYRGYTAEET----------------------------LNRWESVRRGEKRYIFPHQEHADVVFNSALVYELAVLKPLAEPLLLQVEPPS 525          
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A7V3A251_9SPIR (Nucleoside kinase n=2 Tax=Spirochaetales bacterium TaxID=2026792 RepID=A0A7V3A251_9SPIR)

HSP 1 Score: 60.8 bits (146), Expect = 4.860e-6
Identity = 75/357 (21.01%), Postives = 137/357 (38.38%), Query Frame = 2
Query:    8 LAEGLHTAEIEELAKRVTTVPG-VLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLW--DRT---SQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSG-----ASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045
            +AE LH  +I ++A R+      V ++ +AG   +       +L ++LR+ G +P V+   ++    DRT    +G+   E      +     P  ++H  ++  G  +   L + ++G       L  +N  G                         I+++ G   L++ L P     + PA    +++  + Q+ +D  T +   D RL+R +V  ++     A                          +  L  W +    E R    F+ +  V  N+AL ++L VLKP+AEP+L+AV P                  +Y+ +  +L  L     +    VP TS+L   I
Sbjct:  266 VAEALHNKKISQIADRIAERRDQVKVILIAGPSSSGKTTFTKKLAIELRVLGFSPVVVSLDDYFVPRDRTPKDEEGNYDFEA-----LEAIDIPLLNEHLLNLFQGKEVEVPLFDFKTGNRKEAGRLLKINPNG-------------------------ILLMEGIHGLNDRLTPE----IDPAWKFKIYVSALTQLNIDEHTRIPTTDNRLIRRIVRDYQFRGHTA--------------------------YRTLTMWPSVRRGEDRNIFPFQESADVAFNSALDYELGVLKPIAEPILKAVKP---------------HHEVYSEAIRLLSFLNDFLPIPVKYVPETSILREFI 547          
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A413QV35_9FIRM (Nucleoside kinase n=4 Tax=Megasphaera TaxID=906 RepID=A0A413QV35_9FIRM)

HSP 1 Score: 60.1 bits (144), Expect = 8.390e-6
Identity = 71/349 (20.34%), Postives = 131/349 (37.54%), Query Frame = 2
Query:    2 LQLAEGLHTAEIEELAKRVTTV-PGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045
            + +AE L   ++ ELA  +    P + +V +AG   A       RL  QLR+ G  P  +   ++ ++R               +     P  +Q  D +  G  +     E   G    D                        R +    +VV G   L++ L     + L   E V + + ++ Q+ +++   ++ +D R++R +V  H+   +  E+                           +E W      E++    ++       NTALP++L VLKP AEPLL ++      G+D         S  YA ++ +++ L+  + + +  VP  S+L   I
Sbjct:  261 VDMAEALQEKKLAELADYIVAQRPKIKVVLIAGPSSAGKTTFCKRLTTQLRVDGLRPVRISLDDYFYNREDTPRNPDGSYDFESLRAIDVPLFNQQIDDLNQGKDVHLARFEFVEGKRYFDEK--------------------PTRLEPGQPIVVEGLHALNDSL----TYMLPRYEKVKISLGVLTQIRINDHNRISTSDTRIIRRMVRDHQFRGRGPEAT--------------------------MEIWGDVRRGEEKNIYPYQEDADTIFNTALPYELAVLKPYAEPLLESI------GQD---------SPYYAEAQRLVKFLKPFKPVDSSVVPMNSLLREFI 544          
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A7V8A4H8_9BACT (Uridine kinase n=1 Tax=Fusobacteria bacterium TaxID=2060921 RepID=A0A7V8A4H8_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 1.940e-5
Identity = 34/106 (32.08%), Postives = 50/106 (47.17%), Query Frame = 2
Query:  728 DTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045
            DT      W +  + E+     ++    +H N++LPH+LNVLK  AEPLL+ V                  S  Y  ++ +L +LR CE L A  VP+ S+L   I
Sbjct:  449 DTEKTFSIWPSVRKGEENNIFKYQELADIHFNSSLPHELNVLKVYAEPLLKTVT---------------ADSIYYIEAQHLLNILRFCEPLDAMWVPSNSILREFI 539          
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A1I0QCL7_9FIRM (Uridine kinase n=1 Tax=[Clostridium] fimetarium TaxID=99656 RepID=A0A1I0QCL7_9FIRM)

HSP 1 Score: 58.2 bits (139), Expect = 3.320e-5
Identity = 69/291 (23.71%), Postives = 110/291 (37.80%), Query Frame = 2
Query:   14 EGLHTAEIEELAKRVTTVPGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAV 886
            E L   +I E+A+ +T++P    V +AG   +     + RL +QLR  G  P  +   N+  +R         +   G+ +         H   +AL    +  L E R+    +     G +   GD+   G            DI+V+ G   L++E+       L       ++I  + Q+ VD    V   D RL+R LV   ++    AE                            L  W +    E+     F+    V  N+AL H+L VLKP AEPLL ++
Sbjct:  251 EALQEQKIAEIARTITSMPEKKFVMIAGPSSSGKTTFSHRLSIQLRACGLKPHPIAVDNYFVEREQ-----TPIDENGISNFED-----LHAIDIALFNMHMKELLEGRTVEIPTFNFITGKKEYRGDYRKLGKE----------DILVIEGIHSLNDEM----SNALPRESKFKIYISALTQLNVDEHNRVATTDGRLIRRLVRDARTRGASAEKT--------------------------LSMWESVRRGEELNIFPFQEEADVMFNSALVHELAVLKPYAEPLLFSI 491          
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Match: A0A0J6ZLM1_9FIRM (Uridine kinase n=1 Tax=Megasphaera cerevisiae DSM 20462 TaxID=1122219 RepID=A0A0J6ZLM1_9FIRM)

HSP 1 Score: 57.8 bits (138), Expect = 4.450e-5
Identity = 72/354 (20.34%), Postives = 132/354 (37.29%), Query Frame = 2
Query:    2 LQLAEGLHTAEIEELAKRVTTV-PGVLLVTLAGRQGAMADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISCSPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGATGLGAAAEGRQKSCDI-----VVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVPQVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSHGRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKPVAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAPSVPATSVLSGLI 1045
            + +AE L   ++ ELA  V T  P + +V +AG   A       RL  QLR+ G  P  +   ++ ++R               +     P  ++  D++  G  +     +  +G    D                         +K   +     +VV G   L+N L     + L   E V + + ++ Q+ +++   ++ +D R++R +V   +   +   +                           +E W      E+     ++       NTALP++L+VLKP AEPLL+++       +D         S  YA ++ +L+ L    AL +  VP  S+L   I
Sbjct:  261 IDMAEALQEKKMAELADYVVTQRPKIKVVLIAGPSSAGKTTFCRRLTTQLRVVGLRPVKISLDDYFYNREDTPRNPDGSYDFESLRAVDVPLFNEQIDALQQGKDVCLARFDFVTGHRYFD-------------------------EKPVHLEVDQPIVVEGLHALNNSL----TYMLPRYEKVKISLGVLTQIRINDHNRISTSDTRIIRRMVRDQQFRDRGPTAT--------------------------MEIWSDVRRGEETNIYPYQEDADTIFNTALPYELSVLKPYAEPLLKSIT------KD---------SPHYAEAQRLLKFLMPFRALKSSVVPPNSLLREFI 544          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1715.4766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KAX6_9PHAE1.690e-7848.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8F4_ECTSI7.500e-7547.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A800BUV2_9BACT4.240e-1326.72Nucleoside kinase (Fragment) n=1 Tax=Candidatus Bi... [more]
UPI00164594521.580e-620.63nucleoside kinase n=1 Tax=Megasphaera hominis TaxI... [more]
UPI001A0601F31.630e-625.33Nucleoside kinase n=1 Tax=Chloroflexi bacterium Ta... [more]
A0A7V3A251_9SPIR4.860e-621.01Nucleoside kinase n=2 Tax=Spirochaetales bacterium... [more]
A0A413QV35_9FIRM8.390e-620.34Nucleoside kinase n=4 Tax=Megasphaera TaxID=906 Re... [more]
A0A7V8A4H8_9BACT1.940e-532.08Uridine kinase n=1 Tax=Fusobacteria bacterium TaxI... [more]
A0A1I0QCL7_9FIRM3.320e-523.71Uridine kinase n=1 Tax=[Clostridium] fimetarium Ta... [more]
A0A0J6ZLM1_9FIRM4.450e-520.34Uridine kinase n=1 Tax=Megasphaera cerevisiae DSM ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1715contigL-elsbetiae_contig1715:5858..8748 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size1779
Cds size951
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815714.8571038-UTR-L-elsbetiae_contig1715:5857..65761622815714.8571038-UTR-L-elsbetiae_contig1715:5857..6576Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1715 5858..6576 -
1691683055.2512898-UTR-L-elsbetiae_contig1715:5857..65761691683055.2512898-UTR-L-elsbetiae_contig1715:5857..6576Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1715 5858..6576 -
1622815714.9243512-UTR-L-elsbetiae_contig1715:8283..83581622815714.9243512-UTR-L-elsbetiae_contig1715:8283..8358Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1715 8284..8358 -
1691683055.3058462-UTR-L-elsbetiae_contig1715:8283..83581691683055.3058462-UTR-L-elsbetiae_contig1715:8283..8358Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1715 8284..8358 -
1622815714.9413302-UTR-L-elsbetiae_contig1715:8714..87481622815714.9413302-UTR-L-elsbetiae_contig1715:8714..8748Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1715 8715..8748 -
1691683055.3155313-UTR-L-elsbetiae_contig1715:8714..87481691683055.3155313-UTR-L-elsbetiae_contig1715:8714..8748Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1715 8715..8748 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815714.8697195-CDS-L-elsbetiae_contig1715:6576..67801622815714.8697195-CDS-L-elsbetiae_contig1715:6576..6780Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1715 6577..6780 -
1691683055.266758-CDS-L-elsbetiae_contig1715:6576..67801691683055.266758-CDS-L-elsbetiae_contig1715:6576..6780Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1715 6577..6780 -
1622815714.8817558-CDS-L-elsbetiae_contig1715:7039..73331622815714.8817558-CDS-L-elsbetiae_contig1715:7039..7333Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1715 7040..7333 -
1691683055.2774904-CDS-L-elsbetiae_contig1715:7039..73331691683055.2774904-CDS-L-elsbetiae_contig1715:7039..7333Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1715 7040..7333 -
1622815714.898035-CDS-L-elsbetiae_contig1715:7555..79421622815714.898035-CDS-L-elsbetiae_contig1715:7555..7942Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1715 7556..7942 -
1691683055.28632-CDS-L-elsbetiae_contig1715:7555..79421691683055.28632-CDS-L-elsbetiae_contig1715:7555..7942Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1715 7556..7942 -
1622815714.9104223-CDS-L-elsbetiae_contig1715:8217..82831622815714.9104223-CDS-L-elsbetiae_contig1715:8217..8283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1715 8218..8283 -
1691683055.2946718-CDS-L-elsbetiae_contig1715:8217..82831691683055.2946718-CDS-L-elsbetiae_contig1715:8217..8283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1715 8218..8283 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1715.4766.1prot_L-elsbetiae_contig1715.4766.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1715 6577..8283 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1715.4766.1

>prot_L-elsbetiae_contig1715.4766.1 ID=prot_L-elsbetiae_contig1715.4766.1|Name=mRNA_L-elsbetiae_contig1715.4766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=317bp
MADVIASRLCVQLRIKGRNPAVLDTGNFLWDRTSQGHVAAEVGHRGLISC
SPPPTSHQHNDSVALGGALVALLKEARSGASLSDVNRGGSRAAAGDHGAT
GLGAAAEGRQKSCDIVVVHGCEPLDNELLPPDKFGLGPAEAVSVFIDLVP
QVCVDNLTPVNGADVRLLRSLVAAHKSYTKDAESAAFGYDGGDGGAGSSH
GRSSFFDTHGFLEGWLAAEEREQRLCRSFRPTTSVHLNTALPHDLNVLKP
VAEPLLRAVAPPTSGGRDGGGGGDGCRSSIYALSRSMLRLLRLCEALHAP
SVPATSVLSGLIWSTP*
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mRNA from alignment at L-elsbetiae_contig1715:5858..8748-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1715.4766.1 ID=mRNA_L-elsbetiae_contig1715.4766.1|Name=mRNA_L-elsbetiae_contig1715.4766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2891bp|location=Sequence derived from alignment at L-elsbetiae_contig1715:5858..8748- (Laminarionema elsbetiae ELsaHSoW15)
GCTTCAGCTAGCCGAAGGACTGCACACCGCGGAGGTGAGCGGAACTTTGT TTCGGCGAGTTGTTGTCGGGAAAACAGGATGGCACTGCTCGGGGCGATGC AAGTCGTTTATGCGGACACCGTGGTGCATGGTCAGTATCGACGCAGTTTG TATATTGTTAGTCCAAATCCTGAACAAGCAGACTGCTCGGGGCGATGCAA GTCGTTTATGCGGACACCGTGGTGCGTGGTCAGTATCGACGCAGTTTGTA TATTGTTAGTCCAAATCCTGAACAAGCAGACACTCTTCCGGGCCGTTTTA CTCGACAACACATCTATCTGCATGACAATGTCTCGAGATCCAGGCCGCAG GGTAACGGCCCCTTGTTCCCCGTGGTCCTTTGCGTCCTAGATTGAAGAGC TCGCTAAGAGGGTTACGACTGTCCCCGGTGTGCTTTTGGTTACCCTGGCG GGACGCCAAGGAGCAATGGCGGACGTGATCGCGTCGCGCCTCTGCGTTCA ACTCAGGATCAAGGGCAGGAACCCAGCAGTGGTGAGATGTCGTGTGCCAC GCTGCTCCTTCTCATGCCGGCCTGTACAAAATCTCGACTCCTTATCACCT TCTACACAGATATATTTACAAGCCTACCCCTGTACTGCTGCATCGTAGCA AATCTCGTCGTTGGCGAGGTAACCTCCAACGTTAATTGCCCACCAGGAAA GCCAAGCTGTTTTTCTCCAAAATGTCCTGTCGATTTGTTCTTGCTCGCAA GAAACAAGAAAGAACGCCGCTTAACCCCCTCCCGTACCCTCCTCCGATGC TCCCAGCTTGACACTGGGAACTTCCTGTGGGACAGAACGTCTCAAGGTCA CGTTGCGGCAGAGGTGGGTCACAGGGGTCTCATCTCCTGTTCTCCGCCAC CTACCTCGCACCAACACAATGACTCAGTGGCTCTTGGTGGGGCTTTAGTC GCTCTTCTCAAAGAGGCTCGATCCGGGGCAAGCTTGTCCGATGTCAACCG CGGTGGGAGTAGAGCTGCAGCGGGCGACCACGGCGCTACCGGCTTGGGGG CGGCCGCGGAGGGGCGCCAGAAGTCGTGTGACATAGTGGTGGTGCACGGC TGCGAGCCGTTAGATAACGAGCTCCTACCGCCGGACAAGTTCGGCCTCGG TCCCGCGGAAGCTGTGTCGGTGTTTATCGACCTGGTGCCTCAGGTGCGCC CGTCTGAGTTCGGCCTCGGGGAAGCTGCAAGTTTTGTCTCGGGGTTGGCA TAAGTAAATCTTGCGGAACCGATAGATCTGCACTTCGCCCCGGTTGCAGG CGCCATGTGGTTGGTTGATGCTCTTTCTGATTTTCGTAGGGTAAACGAGC TTTGATTGTAAACAAGATGCGTATGTACGCCGGTTCTTCTTCCTCGCCGT GGCGTCGTGCGACAGGTCTGCGTCGACAACCTGACTCCCGTCAACGGTGC CGACGTCAGGCTCTTGAGATCACTCGTCGCCGCTCACAAAAGCTACACTA AGGACGCGGAGTCGGCGGCATTCGGCTACGATGGAGGGGACGGCGGGGCC GGAAGTAGTCATGGACGTTCGTCATTTTTCGACACGCACGGCTTTCTCGA GGGGTGGCTAGCAGCTGAGGAGAGGGAACAGAGGCTGTGTCGGTCTTTTC GCCCGACCACGAGCGTTCATTTGAACACGGCTCTTCCGCACGACTTGAAC GTCCTCAAGGTAAGAGACAAAACATCCCCTCATCAAAACGTTTGACGTAC AAGTAGATACATCTAGGCTTCCCCTAAAAGGCATGACTGTTCTGCCAATC ACTCACGCAGGCCTCGCATAGCCTCGCAAGCCCTTCGAGTTGAAGCGTTT CTTCTTCTCGCCGAGAGTGCTTTCACATATCCTGAACCTGAGCGCTAGAA CACCTCCGCCACTTCCCCTTCTCGATCCTACGACGTTTTCGGCTTTGCCT GAATTTGACGGTGCGAAGCCCGTAGCAGAGCCCCTGCTGAGGGCGGTGGC CCCTCCGACCAGTGGCGGCCGGGACGGCGGCGGAGGCGGCGACGGATGCC GTAGTTCGATCTATGCCCTGTCACGGTCGATGCTCCGCCTGCTCCGACTG TGTGAAGCTCTGCACGCCCCGAGTGTCCCGGCGACATCTGTTCTCTCCGG GTTGATATGGTCCACCCCTTGAGCGCGTCGTGTTGTCCGATCTGCCCCCC CCGTCCTCATTGATCTGGAAGCTTCTTGTAGGTTGTGTTTATTAGTCCGA CACTAGCGTTGAGGGCTGCGCGCTTGTTTGGGTTGGTTTTCGTTTCGTGG CGGCGGGTGGCGGGTACTGACGGAGTGGCGAGAGGTGAAGGTCACCGAGA GGGTATTTTCGGCATCCTTCCTGACAGTGCGGAGTCATTTTTGTTGCTCT CGAGTCTACGTGCGGTAGGAAGGGCATATTACAACAACACCCGGTCGGAA GTTACACCCTGCGATCGAGCAGACAAAGACAAAGGCCCAGGACTATTCTT TCGAGGAGCAAGACGCACATACATCCAGATGAAGAGTCGCCGAACGTTTA TTTGTGGGGCAGACTTCGCGAACAGGTTTTCCGCTGGCGCACAGCCGTAT TCGTTAGTTAGAAAGGGGGAGCAATGAGTGGCAGGGAGACAGCGGAAGGG ACACGATGTTGCTCTAGGCGAGGCCAGGAGGACATACTTCGAAAAGTGCC TGACGCGTGTATGCATCTCTGCCAAAGCATACCACCATCACGGCAGGAAG TATCATCGGACAAAAACAGCACCCTGGGTGTGCGCTACATAGGTACACAC CAGACAAGGCGCACTTTGTTCAAACACGGATTTTCGATAGATTGCTCTGC GTGGCATCGCGCTTTGCAATTTAAATTTACTTTTTTATTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1715:5858..8748-

>mRNA_L-elsbetiae_contig1715.4766.1 ID=mRNA_L-elsbetiae_contig1715.4766.1|Name=mRNA_L-elsbetiae_contig1715.4766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1902bp|location=Sequence derived from alignment at L-elsbetiae_contig1715:5858..8748- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGACGTGATCGCGTCGCGCCTCTGCGTTCAACTCAGGATCAAGGG
CAGGAACCCAGCAGTGATGGCGGACGTGATCGCGTCGCGCCTCTGCGTTC
AACTCAGGATCAAGGGCAGGAACCCAGCAGTGCTTGACACTGGGAACTTC
CTGTGGGACAGAACGTCTCAAGGTCACGTTGCGGCAGAGGTGGGTCACAG
GGGTCTCATCTCCTGTTCTCCGCCACCTACCTCGCACCAACACAATGACT
CAGTGGCTCTTGGTGGGGCTTTAGTCGCTCTTCTCAAAGAGGCTCGATCC
GGGGCAAGCTTGTCCGATGTCAACCGCGGTGGGAGTAGAGCTGCAGCGGG
CGACCACGGCGCTACCGGCTTGGGGGCGGCCGCGGAGGGGCGCCAGAAGT
CGTGTGACATAGTGGTGGTGCACGGCTGCGAGCCGTTAGATAACGAGCTC
CTACCGCCGGACAAGTTCGGCCTCGGTCCCGCGGAAGCTGTGTCGGTGTT
TATCGACCTGGTGCCTCAGCTTGACACTGGGAACTTCCTGTGGGACAGAA
CGTCTCAAGGTCACGTTGCGGCAGAGGTGGGTCACAGGGGTCTCATCTCC
TGTTCTCCGCCACCTACCTCGCACCAACACAATGACTCAGTGGCTCTTGG
TGGGGCTTTAGTCGCTCTTCTCAAAGAGGCTCGATCCGGGGCAAGCTTGT
CCGATGTCAACCGCGGTGGGAGTAGAGCTGCAGCGGGCGACCACGGCGCT
ACCGGCTTGGGGGCGGCCGCGGAGGGGCGCCAGAAGTCGTGTGACATAGT
GGTGGTGCACGGCTGCGAGCCGTTAGATAACGAGCTCCTACCGCCGGACA
AGTTCGGCCTCGGTCCCGCGGAAGCTGTGTCGGTGTTTATCGACCTGGTG
CCTCAGGTCTGCGTCGACAACCTGACTCCCGTCAACGGTGCCGACGTCAG
GCTCTTGAGATCACTCGTCGCCGCTCACAAAAGCTACACTAAGGACGCGG
AGTCGGCGGCATTCGGCTACGATGGAGGGGACGGCGGGGCCGGAAGTAGT
CATGGACGTTCGTCATTTTTCGACACGCACGGCTTTCTCGAGGGGTGGCT
AGCAGCTGAGGAGAGGGAACAGAGGCTGTGTCGGTCTTTTCGCCCGACCA
CGAGCGTTCATTTGAACACGGCTCTTCCGCACGACTTGAACGTCCTCAAG
GTCTGCGTCGACAACCTGACTCCCGTCAACGGTGCCGACGTCAGGCTCTT
GAGATCACTCGTCGCCGCTCACAAAAGCTACACTAAGGACGCGGAGTCGG
CGGCATTCGGCTACGATGGAGGGGACGGCGGGGCCGGAAGTAGTCATGGA
CGTTCGTCATTTTTCGACACGCACGGCTTTCTCGAGGGGTGGCTAGCAGC
TGAGGAGAGGGAACAGAGGCTGTGTCGGTCTTTTCGCCCGACCACGAGCG
TTCATTTGAACACGGCTCTTCCGCACGACTTGAACGTCCTCAAGCCCGTA
GCAGAGCCCCTGCTGAGGGCGGTGGCCCCTCCGACCAGTGGCGGCCGGGA
CGGCGGCGGAGGCGGCGACGGATGCCGTAGTTCGATCTATGCCCTGTCAC
GGTCGATGCTCCGCCTGCTCCGACTGTGTGAAGCTCTGCACGCCCCGAGT
GTCCCGGCGACATCTGTTCTCTCCGGGTTGATATGGTCCACCCCTTGACC
CGTAGCAGAGCCCCTGCTGAGGGCGGTGGCCCCTCCGACCAGTGGCGGCC
GGGACGGCGGCGGAGGCGGCGACGGATGCCGTAGTTCGATCTATGCCCTG
TCACGGTCGATGCTCCGCCTGCTCCGACTGTGTGAAGCTCTGCACGCCCC
GAGTGTCCCGGCGACATCTGTTCTCTCCGGGTTGATATGGTCCACCCCTT
GA
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