mRNA_L-elsbetiae_contig17109.4752.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI) HSP 1 Score: 370 bits (950), Expect = 8.140e-121 Identity = 253/453 (55.85%), Postives = 286/453 (63.13%), Query Frame = 1 Query: 4 GSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGVRVGRRHN---TQDE--------IASSSSGASGKALELVDRNGKKKRSPRLLAGAAGVHQ---EDEKEGSGLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEARTNDGDALLESRPGDVSTAGNGSAXXXXXRDGAGG-------AREKAGVLVAIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWXXXXXXXXXXXGVLYAGLGARRCFAVSAALPSLSLLLLALPTARRWCSGGRGVGDGRRSRVGLAAGNAPSRGRRPGGN-------DGRS-YELVGK 1275 G+ RLWGA+GFGIASLI GYV D YGGSY GVM+VF+ N+ VA+ ASTGV +GRR T+D+ + A+G EL +++ + SPR + V + E E E GL T EA+T+ A L SRP S G G A+E+ GVL+A+R M+ T ESASFF AV LSGMG+GVIDTFLFIRLEELGGSHVLCGLARLIMC++EVPFFYLSGPLIRR+GVRGVIAL Q+AYLTRF YYS LR+PWWVLPAEVLHGLTFAAMWAATT+YAH IAPAHLRTTIQG VS XXXXXXXXXXX +LYAGLGA RCFAVSAALPSLSLLLL LPTA+RW SG D R R G A G P RR G DGRS YELV K Sbjct: 76 GNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGXXXXXXXXXNGVATGGDFELGEKSTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGND-----EAQTH---AALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRWISGT----DARDGRPG-AKGMPPGSSRRCWGXXXXXXXXDGRSSYELVAK 515
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE) HSP 1 Score: 346 bits (888), Expect = 7.240e-113 Identity = 230/331 (69.49%), Postives = 246/331 (74.32%), Query Frame = 1 Query: 1 FGSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGVRVGRRHNTQD----------EIASSSSGASGKALELVDRNGKKKRSPRLLAGAAGVHQEDEKEGSGLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEARTNDGDALLESRPGDVSTAGNGSAXXXXXRDGAGGAREKAGVLVAIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAP 963 FGSQRLWGAVGFG ASL+AGYV DLYGGS+ GVMLVF+GN+LVAL+ASTGV +G+ +N E AS S ASG+ LE DR K G GVHQE +K GS L T XXXXXXXXXX XXXXXXXXXX +T DGDALLE PGD T G G XXXXX GAG EKAGV++AIR ML TDESASFFTAV LSGMG GVIDTFLFIRLEELGGS VLCGLARLIMC++EVPFFYLSGPLIRR G RGVIALAQLAYLTRF YYS LREPWWVLP+EVLHGLTFAAMWAATTDYAHQIAP Sbjct: 96 FGSQRLWGAVGFGTASLVAGYVCDLYGGSFSGVMLVFVGNVLVALMASTGVPIGQVNNDXXXXXXXNDQNIEGASGGSNASGEVLESADRENNDKG-----IGWKGVHQEHKKVGSSLRLTVSTSNTSTXXXXXXXXXXNHLDLHXXXXXXXXXX-----QTTDGDALLEYHPGDSRTGG-GXKXXXXXXXGAG---EKAGVVMAIRIMLSTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRVLCGLARLIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 412
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE) HSP 1 Score: 291 bits (744), Expect = 1.420e-89 Identity = 180/345 (52.17%), Postives = 209/345 (60.58%), Query Frame = 1 Query: 1 FGSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGVRVGRRHN---TQDEIASSSSG-----------ASGKALELVDRNGKKKRSPRLLAGAAGVHQED---EKEGSGLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEARTNDGDALLESRP-------GDVSTAGNGSAXXXXXRDGAGGAREKAGVLVAIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAP 963 +G+ RLWGA+GFGIASLI G+V D YGGSY GVM+VF+ N+ VA+ ASTGV +GRR T+D+ A+G EL ++ + SPR V ++ E + +GL T EG ALL SRP G T G+ A A+E+ GVL+A+R M T ESASFF AV LSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMC++EVPFFYLSGPLIRR+GVRGVIAL Q+AYLTRF YYS LREPWWVLPAEVLHGLTFAAMWAATT+YAH IAP Sbjct: 127 YGNLRLWGAIGFGIASLIGGFVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGGXXXXXXXXXXXXXVATGGDFELGEKRTESPVSPRTATRGCAVARDKTAGEPKCAGLIGTAAVTPAVATDTAATADGNHDHLYDDDEP-------EGNDEAQTHSALL-SRPRTTSDKDGGGDTNGSSGASRGDGEGPGRKAKEQGGVLMAVRIMTNTGESASFFMAVGLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLREPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 463
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: A0A6H5JI17_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI17_9PHAE) HSP 1 Score: 201 bits (512), Expect = 7.460e-58 Identity = 129/327 (39.45%), Postives = 167/327 (51.07%), Query Frame = 1 Query: 1 FGSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGVRVGRRHNTQDEIASSSSGASGKALELVDRNGKKKRSPRLLAGAAGVHQEDEKEGSGLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEARTNDGDALLESRPGDVSTAGNGSAXXXXXRDGAGGAREKAGVLVAIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTT 981 +G+QR WGA G+G+A+LI+G+V D GGSY G+M+VF+ + +AL+A+ GV VGR + +G DR+G + H E E +G A D RP V +E+ V + M ++ SFF V LSGM GVIDTFLFI L+ELGGSHVL GLA ++MC EVPFFY+SG IR++G R V+AL+Q+ Y+ R YYS L +PWWVLPAE+LHGLTFAAMWAATTDYAH IAP +T+ Sbjct: 41 YGTQRSWGAAGYGLATLISGFVYDAAGGSYDGLMVVFVTVLALALLAALGVPVGRTNEP--------AGGQDDEEPRGDRSG--------TSDNWSAHGETELVETGRAREDEVTNTRPCVGMNVDDLE--------------------------DEESSKRPDHVE-------------------QEEHRVASVLWIMFSAPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSVLWDPWWVLPAELLHGLTFAAMWAATTDYAHGIAPGRDQTS 306
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: D7G4M5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI) HSP 1 Score: 202 bits (515), Expect = 2.120e-57 Identity = 134/333 (40.24%), Postives = 177/333 (53.15%), Query Frame = 1 Query: 1 FGSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGVRVGRRHNTQDEIASSSSGASGKALELVDRNGKKKRSPRLLAGAAGVHQEDEKEGSGLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEARTNDGDALLESRPGDVSTAGNGSAXXXXXRDGAGGAR------EKAGVLVAIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTT 981 +G+QR WGA G+G+A++I+G+V D GGSY G+M+ F+ + +AL+A+ GV VGR DE A + DR+G + + VH E E +G A+ D + ++RP +A DG R E+ V + M T ++ SFF V LSGM GVIDTFLFI L+ELGGSHVL GLA ++MC EVPFFY+SG IR++G R V+AL+Q+ Y+ R YYS L +PWWVLPAE+LHGLTFAAMWAATTDYAH IAP +T+ Sbjct: 100 YGTQRSWGAAGYGLAAVISGFVYDATGGSYDGLMVAFVTVLALALLAALGVPVGRT----DEPAGDQDDEEARR----DRSG--------TSDNSFVHGETELVENGRASE--------------------------------------------DEVTDTRPCVGISA-------EDLEDGEPSKRLEHLEQEEHRVASVLWIMFSTPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSVLWDPWWVLPAELLHGLTFAAMWAATTDYAHGIAPGRDQTS 365
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: D7G0X9_ECTSI (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X9_ECTSI) HSP 1 Score: 158 bits (400), Expect = 9.140e-43 Identity = 82/147 (55.78%), Postives = 96/147 (65.31%), Query Frame = 1 Query: 739 MCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYS----------------ALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWXXXXXXXXXXXGVLYAGLGARRCFAVSAALPSLSLLLLAL 1131 M SEVPFFY+SGPLIR +G R V+AL+Q+ Y+ R YYS L +PWWVLPAE+ HGLTFAAMW+ATTDYAH IAPAHLRTT+Q +V GL GV YA LG RRCF +AALP+LSLL L + Sbjct: 1 MSFSEVPFFYVSGPLIRTIGPRNVVALSQIGYIVRLIYYSKTSSVTNPLTGLRHLQVLSDPWWVLPAELFHGLTFAAMWSATTDYAHGIAPAHLRTTMQASVGGLKRGLGYGLGAIVGGVSYANLGPRRCFLATAALPALSLLFLVI 147
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: A9VAW9_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VAW9_MONBE) HSP 1 Score: 154 bits (389), Expect = 1.960e-38 Identity = 82/195 (42.05%), Postives = 110/195 (56.41%), Query Frame = 1 Query: 622 FFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWXXXXXXXXXXXGVLYAGLGARRCFAVSAALPSLSLLLLALPTARRW----CSGGRGVGDGRRSRV 1194 FF + LSG G+G+ID +LFI +EELGG+ + G+AR +MC +EVP F+ SG + RLG G + + A++ RF Y+ + PW V+ +E LHGLTFA MW A T A IAP L TT+QG VSGLH+ G +Y GA F ++ S SL+LL + RW C+G G R R Sbjct: 262 FFLTIALSGFGAGIIDNYLFIYIEELGGTKTIQGMARFVMCAAEVPMFWYSGAIFDRLGTTGCLVVTFCAFIVRFLIYAFMSNPWLVVASEPLHGLTFAVMWTAATRQAFAIAPQGLGTTMQGIVSGLHFGLGSGMGALVGGFVYESKGAFSTFMLAVGTASSSLVLLLIAEWTRWRKNRCNGFNPAAAGGRQRT 456
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: A0A7S0ZL95_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL95_9RHOD) HSP 1 Score: 152 bits (385), Expect = 4.930e-38 Identity = 71/154 (46.10%), Postives = 101/154 (65.58%), Query Frame = 1 Query: 622 FFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWXXXXXXXXXXXGVLYAGLGARRCF 1083 FF + +SG+G+G+I+TFLF+RL ELG + + G++RL+MC+ E+PFF+ + L+ R GV GV+ + Q AY RFF+YS L+ PW V+ EVLHG+T+ A+W ++ +AHQIAPA L T Q V +HW GVLY +GA F Sbjct: 262 FFLILLISGLGNGMIETFLFVRLNELGATSRVLGISRLLMCLGELPFFHYNEQLVSRFGVFGVLGIVQCAYCVRFFWYSVLQNPWNVVYVEVLHGITYGALWGTSSVFAHQIAPAGLEATAQSLVGLIHWGIGFTLGSTLGGVLYEHVGAVNTF 415
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: F2U1L1_SALR5 (MFS domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1L1_SALR5) HSP 1 Score: 149 bits (376), Expect = 2.070e-35 Identity = 77/190 (40.53%), Postives = 111/190 (58.42%), Query Frame = 1 Query: 583 AIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWXXXXXXXXXXXGVLYAGLGARRCFAVSAALPSLSLLLLALPTARRWC 1152 A+R ++ + FF + ++G G GVI+TFLFI +++LGGS + G R + C+SEVP F+ SG ++ +LGV G + L + Y+ RF YS +R PW V+ +E LHG+TFA MWA +T YA IAP L T+QG + GLH+ G +Y GAR F VSA + + + L A + C Sbjct: 501 ALRVIVQDANTMMFFFIIVVAGFGVGVIETFLFIFIQQLGGSETVQGFGRFVTCMSEVPLFWFSGYIMNKLGVNGCLMLTFVCYVLRFTIYSLMRSPWLVVASEPLHGVTFAIMWATSTKYAADIAPPGLGATMQGILGGLHFGLGQGLGALIGGAIYDVHGARFTFRVSAGMAGAAFVFLVASEAVKKC 690
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: D7G0X7_ECTSI (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X7_ECTSI) HSP 1 Score: 128 bits (322), Expect = 5.820e-33 Identity = 56/75 (74.67%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 739 MCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAP 963 MC+SEVPFFY+SGPLIR++G R V+AL+Q+ Y+ R YYS L +PWWVLPAE+LHGLTFAAMWAATTDYAH IAP Sbjct: 1 MCLSEVPFFYVSGPLIRKIGPRNVVALSQIGYIVRLVYYSVLSDPWWVLPAELLHGLTFAAMWAATTDYAHGIAP 75 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17109.4752.1 >prot_L-elsbetiae_contig17109.4752.1 ID=prot_L-elsbetiae_contig17109.4752.1|Name=mRNA_L-elsbetiae_contig17109.4752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=432bp FGSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGback to top mRNA from alignment at L-elsbetiae_contig17109:314..3123- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17109.4752.1 ID=mRNA_L-elsbetiae_contig17109.4752.1|Name=mRNA_L-elsbetiae_contig17109.4752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2810bp|location=Sequence derived from alignment at L-elsbetiae_contig17109:314..3123- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17109:314..3123- >mRNA_L-elsbetiae_contig17109.4752.1 ID=mRNA_L-elsbetiae_contig17109.4752.1|Name=mRNA_L-elsbetiae_contig17109.4752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2592bp|location=Sequence derived from alignment at L-elsbetiae_contig17109:314..3123- (Laminarionema elsbetiae ELsaHSoW15)back to top |