mRNA_L-elsbetiae_contig17109.4752.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig17109.4752.1
Unique NamemRNA_L-elsbetiae_contig17109.4752.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 8.140e-121
Identity = 253/453 (55.85%), Postives = 286/453 (63.13%), Query Frame = 1
Query:    4 GSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGVRVGRRHN---TQDE--------IASSSSGASGKALELVDRNGKKKRSPRLLAGAAGVHQ---EDEKEGSGLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEARTNDGDALLESRPGDVSTAGNGSAXXXXXRDGAGG-------AREKAGVLVAIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWXXXXXXXXXXXGVLYAGLGARRCFAVSAALPSLSLLLLALPTARRWCSGGRGVGDGRRSRVGLAAGNAPSRGRRPGGN-------DGRS-YELVGK 1275
            G+ RLWGA+GFGIASLI GYV D YGGSY GVM+VF+ N+ VA+ ASTGV +GRR     T+D+            +  A+G   EL +++ +   SPR  +    V +   E E E  GL  T                                     EA+T+   A L SRP   S    G           G        A+E+ GVL+A+R M+ T ESASFF AV LSGMG+GVIDTFLFIRLEELGGSHVLCGLARLIMC++EVPFFYLSGPLIRR+GVRGVIAL Q+AYLTRF YYS LR+PWWVLPAEVLHGLTFAAMWAATT+YAH IAPAHLRTTIQG VS    XXXXXXXXXXX +LYAGLGA RCFAVSAALPSLSLLLL LPTA+RW SG     D R  R G A G  P   RR  G        DGRS YELV K
Sbjct:   76 GNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGXXXXXXXXXNGVATGGDFELGEKSTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGND-----EAQTH---AALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRWISGT----DARDGRPG-AKGMPPGSSRRCWGXXXXXXXXDGRSSYELVAK 515          
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 7.240e-113
Identity = 230/331 (69.49%), Postives = 246/331 (74.32%), Query Frame = 1
Query:    1 FGSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGVRVGRRHNTQD----------EIASSSSGASGKALELVDRNGKKKRSPRLLAGAAGVHQEDEKEGSGLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEARTNDGDALLESRPGDVSTAGNGSAXXXXXRDGAGGAREKAGVLVAIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAP 963
            FGSQRLWGAVGFG ASL+AGYV DLYGGS+ GVMLVF+GN+LVAL+ASTGV +G+ +N             E AS  S ASG+ LE  DR    K       G  GVHQE +K GS L  T        XXXXXXXXXX      XXXXXXXXXX     +T DGDALLE  PGD  T G G  XXXXX  GAG   EKAGV++AIR ML TDESASFFTAV LSGMG GVIDTFLFIRLEELGGS VLCGLARLIMC++EVPFFYLSGPLIRR G RGVIALAQLAYLTRF YYS LREPWWVLP+EVLHGLTFAAMWAATTDYAHQIAP
Sbjct:   96 FGSQRLWGAVGFGTASLVAGYVCDLYGGSFSGVMLVFVGNVLVALMASTGVPIGQVNNDXXXXXXXNDQNIEGASGGSNASGEVLESADRENNDKG-----IGWKGVHQEHKKVGSSLRLTVSTSNTSTXXXXXXXXXXNHLDLHXXXXXXXXXX-----QTTDGDALLEYHPGDSRTGG-GXKXXXXXXXGAG---EKAGVVMAIRIMLSTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRVLCGLARLIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 412          
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 1.420e-89
Identity = 180/345 (52.17%), Postives = 209/345 (60.58%), Query Frame = 1
Query:    1 FGSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGVRVGRRHN---TQDEIASSSSG-----------ASGKALELVDRNGKKKRSPRLLAGAAGVHQED---EKEGSGLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEARTNDGDALLESRP-------GDVSTAGNGSAXXXXXRDGAGGAREKAGVLVAIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAP 963
            +G+ RLWGA+GFGIASLI G+V D YGGSY GVM+VF+ N+ VA+ ASTGV +GRR     T+D+                  A+G   EL ++  +   SPR       V ++    E + +GL  T                                   EG        ALL SRP       G   T G+  A           A+E+ GVL+A+R M  T ESASFF AV LSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMC++EVPFFYLSGPLIRR+GVRGVIAL Q+AYLTRF YYS LREPWWVLPAEVLHGLTFAAMWAATT+YAH IAP
Sbjct:  127 YGNLRLWGAIGFGIASLIGGFVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGGXXXXXXXXXXXXXVATGGDFELGEKRTESPVSPRTATRGCAVARDKTAGEPKCAGLIGTAAVTPAVATDTAATADGNHDHLYDDDEP-------EGNDEAQTHSALL-SRPRTTSDKDGGGDTNGSSGASRGDGEGPGRKAKEQGGVLMAVRIMTNTGESASFFMAVGLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLREPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 463          
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: A0A6H5JI17_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI17_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 7.460e-58
Identity = 129/327 (39.45%), Postives = 167/327 (51.07%), Query Frame = 1
Query:    1 FGSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGVRVGRRHNTQDEIASSSSGASGKALELVDRNGKKKRSPRLLAGAAGVHQEDEKEGSGLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEARTNDGDALLESRPGDVSTAGNGSAXXXXXRDGAGGAREKAGVLVAIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTT 981
            +G+QR WGA G+G+A+LI+G+V D  GGSY G+M+VF+  + +AL+A+ GV VGR +          +G         DR+G         +     H E E   +G A                                              D     RP  V                    +E+  V   +  M    ++ SFF  V LSGM  GVIDTFLFI L+ELGGSHVL GLA ++MC  EVPFFY+SG  IR++G R V+AL+Q+ Y+ R  YYS L +PWWVLPAE+LHGLTFAAMWAATTDYAH IAP   +T+
Sbjct:   41 YGTQRSWGAAGYGLATLISGFVYDAAGGSYDGLMVVFVTVLALALLAALGVPVGRTNEP--------AGGQDDEEPRGDRSG--------TSDNWSAHGETELVETGRAREDEVTNTRPCVGMNVDDLE--------------------------DEESSKRPDHVE-------------------QEEHRVASVLWIMFSAPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSVLWDPWWVLPAELLHGLTFAAMWAATTDYAHGIAPGRDQTS 306          
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: D7G4M5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.120e-57
Identity = 134/333 (40.24%), Postives = 177/333 (53.15%), Query Frame = 1
Query:    1 FGSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTGVRVGRRHNTQDEIASSSSGASGKALELVDRNGKKKRSPRLLAGAAGVHQEDEKEGSGLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEARTNDGDALLESRPGDVSTAGNGSAXXXXXRDGAGGAR------EKAGVLVAIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTT 981
            +G+QR WGA G+G+A++I+G+V D  GGSY G+M+ F+  + +AL+A+ GV VGR     DE A        +     DR+G         +  + VH E E   +G A+                                             D + ++RP    +A           DG    R      E+  V   +  M  T ++ SFF  V LSGM  GVIDTFLFI L+ELGGSHVL GLA ++MC  EVPFFY+SG  IR++G R V+AL+Q+ Y+ R  YYS L +PWWVLPAE+LHGLTFAAMWAATTDYAH IAP   +T+
Sbjct:  100 YGTQRSWGAAGYGLAAVISGFVYDATGGSYDGLMVAFVTVLALALLAALGVPVGRT----DEPAGDQDDEEARR----DRSG--------TSDNSFVHGETELVENGRASE--------------------------------------------DEVTDTRPCVGISA-------EDLEDGEPSKRLEHLEQEEHRVASVLWIMFSTPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSVLWDPWWVLPAELLHGLTFAAMWAATTDYAHGIAPGRDQTS 365          
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: D7G0X9_ECTSI (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X9_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 9.140e-43
Identity = 82/147 (55.78%), Postives = 96/147 (65.31%), Query Frame = 1
Query:  739 MCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYS----------------ALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWXXXXXXXXXXXGVLYAGLGARRCFAVSAALPSLSLLLLAL 1131
            M  SEVPFFY+SGPLIR +G R V+AL+Q+ Y+ R  YYS                 L +PWWVLPAE+ HGLTFAAMW+ATTDYAH IAPAHLRTT+Q +V GL             GV YA LG RRCF  +AALP+LSLL L +
Sbjct:    1 MSFSEVPFFYVSGPLIRTIGPRNVVALSQIGYIVRLIYYSKTSSVTNPLTGLRHLQVLSDPWWVLPAELFHGLTFAAMWSATTDYAHGIAPAHLRTTMQASVGGLKRGLGYGLGAIVGGVSYANLGPRRCFLATAALPALSLLFLVI 147          
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: A9VAW9_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VAW9_MONBE)

HSP 1 Score: 154 bits (389), Expect = 1.960e-38
Identity = 82/195 (42.05%), Postives = 110/195 (56.41%), Query Frame = 1
Query:  622 FFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWXXXXXXXXXXXGVLYAGLGARRCFAVSAALPSLSLLLLALPTARRW----CSGGRGVGDGRRSRV 1194
            FF  + LSG G+G+ID +LFI +EELGG+  + G+AR +MC +EVP F+ SG +  RLG  G + +   A++ RF  Y+ +  PW V+ +E LHGLTFA MW A T  A  IAP  L TT+QG VSGLH+           G +Y   GA   F ++    S SL+LL +    RW    C+G      G R R 
Sbjct:  262 FFLTIALSGFGAGIIDNYLFIYIEELGGTKTIQGMARFVMCAAEVPMFWYSGAIFDRLGTTGCLVVTFCAFIVRFLIYAFMSNPWLVVASEPLHGLTFAVMWTAATRQAFAIAPQGLGTTMQGIVSGLHFGLGSGMGALVGGFVYESKGAFSTFMLAVGTASSSLVLLLIAEWTRWRKNRCNGFNPAAAGGRQRT 456          
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: A0A7S0ZL95_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL95_9RHOD)

HSP 1 Score: 152 bits (385), Expect = 4.930e-38
Identity = 71/154 (46.10%), Postives = 101/154 (65.58%), Query Frame = 1
Query:  622 FFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWXXXXXXXXXXXGVLYAGLGARRCF 1083
            FF  + +SG+G+G+I+TFLF+RL ELG +  + G++RL+MC+ E+PFF+ +  L+ R GV GV+ + Q AY  RFF+YS L+ PW V+  EVLHG+T+ A+W  ++ +AHQIAPA L  T Q  V  +HW           GVLY  +GA   F
Sbjct:  262 FFLILLISGLGNGMIETFLFVRLNELGATSRVLGISRLLMCLGELPFFHYNEQLVSRFGVFGVLGIVQCAYCVRFFWYSVLQNPWNVVYVEVLHGITYGALWGTSSVFAHQIAPAGLEATAQSLVGLIHWGIGFTLGSTLGGVLYEHVGAVNTF 415          
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: F2U1L1_SALR5 (MFS domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1L1_SALR5)

HSP 1 Score: 149 bits (376), Expect = 2.070e-35
Identity = 77/190 (40.53%), Postives = 111/190 (58.42%), Query Frame = 1
Query:  583 AIRAMLGTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWXXXXXXXXXXXGVLYAGLGARRCFAVSAALPSLSLLLLALPTARRWC 1152
            A+R ++    +  FF  + ++G G GVI+TFLFI +++LGGS  + G  R + C+SEVP F+ SG ++ +LGV G + L  + Y+ RF  YS +R PW V+ +E LHG+TFA MWA +T YA  IAP  L  T+QG + GLH+           G +Y   GAR  F VSA +   + + L    A + C
Sbjct:  501 ALRVIVQDANTMMFFFIIVVAGFGVGVIETFLFIFIQQLGGSETVQGFGRFVTCMSEVPLFWFSGYIMNKLGVNGCLMLTFVCYVLRFTIYSLMRSPWLVVASEPLHGVTFAIMWATSTKYAADIAPPGLGATMQGILGGLHFGLGQGLGALIGGAIYDVHGARFTFRVSAGMAGAAFVFLVASEAVKKC 690          
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Match: D7G0X7_ECTSI (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X7_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 5.820e-33
Identity = 56/75 (74.67%), Postives = 66/75 (88.00%), Query Frame = 1
Query:  739 MCVSEVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVLHGLTFAAMWAATTDYAHQIAP 963
            MC+SEVPFFY+SGPLIR++G R V+AL+Q+ Y+ R  YYS L +PWWVLPAE+LHGLTFAAMWAATTDYAH IAP
Sbjct:    1 MCLSEVPFFYVSGPLIRKIGPRNVVALSQIGYIVRLVYYSVLSDPWWVLPAELLHGLTFAAMWAATTDYAHGIAP 75          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17109.4752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3W1_ECTSI8.140e-12155.85MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JEM5_9PHAE7.240e-11369.49MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5K6H4_9PHAE1.420e-8952.17MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JI17_9PHAE7.460e-5839.45MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
D7G4M5_ECTSI2.120e-5740.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0X9_ECTSI9.140e-4355.78MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A9VAW9_MONBE1.960e-3842.05Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7S0ZL95_9RHOD4.930e-3846.10Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
F2U1L1_SALR52.070e-3540.53MFS domain-containing protein n=1 Tax=Salpingoeca ... [more]
D7G0X7_ECTSI5.820e-3374.67MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17109contigL-elsbetiae_contig17109:314..3123 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.1
Seed ortholog evalue3.6e-100
Seed eggNOG ortholog2880.D7G3W1
KEGG koko:K11367
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.MFS_1 like family
EggNOG OGsKOG3762@1,KOG3762@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03021,ko03036
Exons5
Model size1298
Cds size1296
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17109.4752.1prot_L-elsbetiae_contig17109.4752.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig17109 314..3123 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815713.2535613-CDS-L-elsbetiae_contig17109:313..6451622815713.2535613-CDS-L-elsbetiae_contig17109:313..645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17109 314..645 -
1691683054.1990418-CDS-L-elsbetiae_contig17109:313..6451691683054.1990418-CDS-L-elsbetiae_contig17109:313..645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17109 314..645 -
1622815713.2655032-CDS-L-elsbetiae_contig17109:940..10461622815713.2655032-CDS-L-elsbetiae_contig17109:940..1046Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17109 941..1046 -
1691683054.2130017-CDS-L-elsbetiae_contig17109:940..10461691683054.2130017-CDS-L-elsbetiae_contig17109:940..1046Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17109 941..1046 -
1622815713.2773163-CDS-L-elsbetiae_contig17109:1245..14171622815713.2773163-CDS-L-elsbetiae_contig17109:1245..1417Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17109 1246..1417 -
1691683054.2230244-CDS-L-elsbetiae_contig17109:1245..14171691683054.2230244-CDS-L-elsbetiae_contig17109:1245..1417Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17109 1246..1417 -
1622815713.2909172-CDS-L-elsbetiae_contig17109:1854..23401622815713.2909172-CDS-L-elsbetiae_contig17109:1854..2340Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17109 1855..2340 -
1691683054.2322412-CDS-L-elsbetiae_contig17109:1854..23401691683054.2322412-CDS-L-elsbetiae_contig17109:1854..2340Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17109 1855..2340 -
1622815713.3048484-CDS-L-elsbetiae_contig17109:2923..31231622815713.3048484-CDS-L-elsbetiae_contig17109:2923..3123Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17109 2924..3123 -
1691683054.2412908-CDS-L-elsbetiae_contig17109:2923..31231691683054.2412908-CDS-L-elsbetiae_contig17109:2923..3123Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17109 2924..3123 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig17109.4752.1

>prot_L-elsbetiae_contig17109.4752.1 ID=prot_L-elsbetiae_contig17109.4752.1|Name=mRNA_L-elsbetiae_contig17109.4752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=432bp
FGSQRLWGAVGFGIASLIAGYVSDLYGGSYYGVMLVFLGNILVALVASTG
VRVGRRHNTQDEIASSSSGASGKALELVDRNGKKKRSPRLLAGAAGVHQE
DEKEGSGLAATPATTTATTAATTTAAAAAAADHHLDRYDDMEEEEEEGEA
RTNDGDALLESRPGDVSTAGNGSAGNGSARDGAGGAREKAGVLVAIRAML
GTDESASFFTAVTLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCVS
EVPFFYLSGPLIRRLGVRGVIALAQLAYLTRFFYYSALREPWWVLPAEVL
HGLTFAAMWAATTDYAHQIAPAHLRTTIQGAVSGLHWGLGFGLGAMLGGV
LYAGLGARRCFAVSAALPSLSLLLLALPTARRWCSGGRGVGDGRRSRVGL
AAGNAPSRGRRPGGNDGRSYELVGKVRGRVF*
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mRNA from alignment at L-elsbetiae_contig17109:314..3123-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig17109.4752.1 ID=mRNA_L-elsbetiae_contig17109.4752.1|Name=mRNA_L-elsbetiae_contig17109.4752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2810bp|location=Sequence derived from alignment at L-elsbetiae_contig17109:314..3123- (Laminarionema elsbetiae ELsaHSoW15)
TTCGGCTCCCAACGGTTGTGGGGTGCTGTCGGGTTCGGGATCGCCTCGTT GATCGCCGGGTACGTTAGCGATCTTTACGGAGGCAGCTACTACGGCGTCA TGCTGGTGTTTCTCGGGAACATTCTGGTGGCGCTAGTGGCGTCGACGGGC GTTCGTGTAGGGCGGCGGCACAACACCCAAGACGAAATAGCCAGCAGCAG GTGAGTTGTGCTTGGTGGCTGTTTTAATAGTGGTTTTGTTTTTGTGGTCC TTGTGTTGTCCACGCCAGCAGTGATATGTATATGTCTACCGTTGGTCTTG TTCATTTTCTGTCCACTTTGACGCACAAAAGAGGGCCCGCAGTGTCCTTG TTCTGCCCTGTGGGAAGAATCCTACTCTCGAGTTGTTGTTTCGTGCCCTC GTCATCGTCATCACCGTCTCCTCCTGATCGTCTGCTGCCCTTTGCGAGAC TGATTGTGCAAGCCATGTGCTGTCTACGTGCGTGCGCACGCACACCTAAC CGCAGCCATTAAGGTTCCTAGAGTTCGACCTATTCGTTTGGAGTGGGAAG AGCCCCCCCCGTGATTGGATGAACATGTGTTCACGCTGCCGTTATTGTTG CCGTCCATATCTCCGGCCTGCAGCCGTGGAGGAAGATTCAACGATTTCGC CGTTCTACCGGGAAGGGTCAAAGGATAAATGTAAACCAGAACCAACCTGC CGACTTGAATTTTGGTCTCTTTTGATAGATGGCGATGGCAATCACCATGT ACTTCTGTGTTACCTCAATCTTGTCAACCGCAGCAGCGGTGCATCCGGGA AAGCGTTGGAGCTCGTGGACAGGAATGGCAAGAAGAAGCGGTCACCTCGA CTTCTCGCAGGAGCGGCCGGTGTCCACCAAGAGGACGAGAAAGAGGGCTC GGGCCTGGCAGCCACCCCTGCGACCACCACTGCCACTACCGCCGCCACCA CCACCGCTGCCGCCGCCGCCGCTGCGGATCACCACCTCGATCGCTACGAC GACATGGAAGAAGAAGAAGAAGAGGGAGAAGCCCGAACGAATGACGGTGA TGCACTGCTGGAGTCTCGCCCTGGCGACGTGAGCACGGCCGGCAACGGTA GCGCGGGCAACGGTAGCGCGCGAGACGGGGCGGGTGGGGCGAGAGAGAAA GCCGGTGTGCTCGTGGCCATCCGCGCCATGCTCGGCACGGACGAGAGCGC ATCGTTCTTCACGGCGGTGACGCTGAGCGGCATGGGCTCGGGTGTCATCG ATACGTTTCTTTTCATCAGGTGATGCGGATGGGTGGGTGATCGGGGTGTT TGGATGTAGGGCGTGGATGCTTTGGTAGTTTAGTTGGCGCGGCCGTTTGC ATCGGGTGTGGGTGAGTTTCAAGTGTGTGTGATAAAACTAGCCGACAGCG TTTTTTTGGCATCTCAGGGTCGCACCGAGTCTTGATTGGCTTCTCCGATG GAACTCTTCGGCAGGCCCATTGCATGCGAACTGCCAGTTTTCCATTTCCA GCCCTTTATGGCTTGGTCCTTTCTGCGACCCCAGCCAGCCCCGGCCTGCC TGCAGCCTCCCCCAACGACCATGCCCATCCTCTTTGCGCCCGTCCTCTAC CCGAGAGACCTGACCGCGTTATTGGCCGAGACGAGAAACTCTTTATCGTA CATATGTTGCGCGTACCCTGCGCGTTCGTGCCTTTCCCACATCTATACCC TGTAAGGCTGGAAGAGCTGGGGGGCTCTCATGTGCTGTGCGGGTTGGCTC GCCTCATCATGTGCGTGTCGGAGGTGCCCTTCTTCTACCTGTCGGGACCG CTCATTCGGCGCCTCGGGGTGAGGGGCGTGATCGCCCTTGCCCAGCTGGC CTACCTCACTCGCTTCTTCTACTACTCGGTGCGTCTGGCATGCACGCCTA TCCGCCTTTCGGTCGAAACTCGGCACACACCTATCCTTCGGCCTGGAGCT CGTGTTTTGAGAAAGTTCCATCTTTGGCACTTGAGTAGGGCACACCTGGT GCCCGTGTTGCAGCTACATGCGTATACTCCCAAGGAGCCAACTGCCTACA ATCTATCGTGCGTGTTGCTATCGGCAGGCTCTCCGAGAGCCGTGGTGGGT GCTCCCTGCGGAGGTATTGCATGGCCTCACCTTTGCAGCCATGTGGGCGG CCACCACCGACTACGCTCACCAAATCGCTCCAGGTACCGAAATAGCAGAG CTTTGCTTCTTCTGACGGAGTCACGTAGTACGCCGTGCTTCCCTGGCTCC TTGCTGGAGTACTTGGCGCCACCACTGACTGTGTGTGGCGATTTGATTTT GTCTCAATTGAGACCATGCTTCGCGCGGGTACCTCGTACCGTACTGCTAT GACAGAAGAAATCGAACACGGCCAAGCCTACACAATCAACTCGCGCAGGC ACTTTGCCCCCCGCCCACTCACTCCTTACCGAAACGCGTGTGCACACTTG CGACAACACATACTTCTACCCACCACAGCTCACCTGCGGACAACGATCCA AGGAGCCGTCTCGGGGCTGCACTGGGGCCTCGGGTTCGGGCTGGGGGCCA TGCTGGGCGGGGTGCTGTACGCCGGCCTAGGTGCCAGGCGGTGCTTCGCT GTGAGCGCCGCGCTGCCCTCGTTGTCTTTGCTCCTGCTAGCCCTGCCCAC GGCGCGCCGCTGGTGTAGCGGCGGCCGCGGCGTGGGCGATGGGCGGCGGT CGAGGGTAGGGCTCGCGGCGGGGAACGCTCCGAGCCGGGGGAGGAGACCT GGCGGCAACGACGGGCGCTCGTACGAGCTCGTCGGCAAGGTCAGAGGGAG GGTGTTTTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig17109:314..3123-

>mRNA_L-elsbetiae_contig17109.4752.1 ID=mRNA_L-elsbetiae_contig17109.4752.1|Name=mRNA_L-elsbetiae_contig17109.4752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2592bp|location=Sequence derived from alignment at L-elsbetiae_contig17109:314..3123- (Laminarionema elsbetiae ELsaHSoW15)
TTCGGCTCCCAACGGTTGTGGGGTGCTGTCGGGTTCGGGATCGCCTCGTT
GATCGCCGGGTACGTTAGCGATCTTTACGGAGGCAGCTACTACGGCGTCA
TGCTGGTGTTTCTCGGGAACATTCTGGTGGCGCTAGTGGCGTCGACGGGC
GTTCGTGTAGGGCGGCGGCACAACACCCAAGACGAAATAGCCAGCAGCAG
TTCGGCTCCCAACGGTTGTGGGGTGCTGTCGGGTTCGGGATCGCCTCGTT
GATCGCCGGGTACGTTAGCGATCTTTACGGAGGCAGCTACTACGGCGTCA
TGCTGGTGTTTCTCGGGAACATTCTGGTGGCGCTAGTGGCGTCGACGGGC
GTTCGTGTAGGGCGGCGGCACAACACCCAAGACGAAATAGCCAGCAGCAG
CAGCGGTGCATCCGGGAAAGCGTTGGAGCTCGTGGACAGGAATGGCAAGA
AGAAGCGGTCACCTCGACTTCTCGCAGGAGCGGCCGGTGTCCACCAAGAG
GACGAGAAAGAGGGCTCGGGCCTGGCAGCCACCCCTGCGACCACCACTGC
CACTACCGCCGCCACCACCACCGCTGCCGCCGCCGCCGCTGCGGATCACC
ACCTCGATCGCTACGACGACATGGAAGAAGAAGAAGAAGAGGGAGAAGCC
CGAACGAATGACGGTGATGCACTGCTGGAGTCTCGCCCTGGCGACGTGAG
CACGGCCGGCAACGGTAGCGCGGGCAACGGTAGCGCGCGAGACGGGGCGG
GTGGGGCGAGAGAGAAAGCCGGTGTGCTCGTGGCCATCCGCGCCATGCTC
GGCACGGACGAGAGCGCATCGTTCTTCACGGCGGTGACGCTGAGCGGCAT
GGGCTCGGGTGTCATCGATACGTTTCTTTTCATCAGCAGCGGTGCATCCG
GGAAAGCGTTGGAGCTCGTGGACAGGAATGGCAAGAAGAAGCGGTCACCT
CGACTTCTCGCAGGAGCGGCCGGTGTCCACCAAGAGGACGAGAAAGAGGG
CTCGGGCCTGGCAGCCACCCCTGCGACCACCACTGCCACTACCGCCGCCA
CCACCACCGCTGCCGCCGCCGCCGCTGCGGATCACCACCTCGATCGCTAC
GACGACATGGAAGAAGAAGAAGAAGAGGGAGAAGCCCGAACGAATGACGG
TGATGCACTGCTGGAGTCTCGCCCTGGCGACGTGAGCACGGCCGGCAACG
GTAGCGCGGGCAACGGTAGCGCGCGAGACGGGGCGGGTGGGGCGAGAGAG
AAAGCCGGTGTGCTCGTGGCCATCCGCGCCATGCTCGGCACGGACGAGAG
CGCATCGTTCTTCACGGCGGTGACGCTGAGCGGCATGGGCTCGGGTGTCA
TCGATACGTTTCTTTTCATCAGGCTGGAAGAGCTGGGGGGCTCTCATGTG
CTGTGCGGGTTGGCTCGCCTCATCATGTGCGTGTCGGAGGTGCCCTTCTT
CTACCTGTCGGGACCGCTCATTCGGCGCCTCGGGGTGAGGGGCGTGATCG
CCCTTGCCCAGCTGGCCTACCTCACTCGCTTCTTCTACTACTCGGCTGGA
AGAGCTGGGGGGCTCTCATGTGCTGTGCGGGTTGGCTCGCCTCATCATGT
GCGTGTCGGAGGTGCCCTTCTTCTACCTGTCGGGACCGCTCATTCGGCGC
CTCGGGGTGAGGGGCGTGATCGCCCTTGCCCAGCTGGCCTACCTCACTCG
CTTCTTCTACTACTCGGCTCTCCGAGAGCCGTGGTGGGTGCTCCCTGCGG
AGGTATTGCATGGCCTCACCTTTGCAGCCATGTGGGCGGCCACCACCGAC
TACGCTCACCAAATCGCTCCAGGCTCTCCGAGAGCCGTGGTGGGTGCTCC
CTGCGGAGGTATTGCATGGCCTCACCTTTGCAGCCATGTGGGCGGCCACC
ACCGACTACGCTCACCAAATCGCTCCAGCTCACCTGCGGACAACGATCCA
AGGAGCCGTCTCGGGGCTGCACTGGGGCCTCGGGTTCGGGCTGGGGGCCA
TGCTGGGCGGGGTGCTGTACGCCGGCCTAGGTGCCAGGCGGTGCTTCGCT
GTGAGCGCCGCGCTGCCCTCGTTGTCTTTGCTCCTGCTAGCCCTGCCCAC
GGCGCGCCGCTGGTGTAGCGGCGGCCGCGGCGTGGGCGATGGGCGGCGGT
CGAGGGTAGGGCTCGCGGCGGGGAACGCTCCGAGCCGGGGGAGGAGACCT
GGCGGCAACGACGGGCGCTCGTACGAGCTCGTCGGCAAGGTCAGAGGGAG
GGTGTTTTGACTCACCTGCGGACAACGATCCAAGGAGCCGTCTCGGGGCT
GCACTGGGGCCTCGGGTTCGGGCTGGGGGCCATGCTGGGCGGGGTGCTGT
ACGCCGGCCTAGGTGCCAGGCGGTGCTTCGCTGTGAGCGCCGCGCTGCCC
TCGTTGTCTTTGCTCCTGCTAGCCCTGCCCACGGCGCGCCGCTGGTGTAG
CGGCGGCCGCGGCGTGGGCGATGGGCGGCGGTCGAGGGTAGGGCTCGCGG
CGGGGAACGCTCCGAGCCGGGGGAGGAGACCTGGCGGCAACGACGGGCGC
TCGTACGAGCTCGTCGGCAAGGTCAGAGGGAGGGTGTTTTGA
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