mRNA_L-elsbetiae_contig17094.4738.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 170 bits (430), Expect = 2.180e-45 Identity = 96/187 (51.34%), Postives = 113/187 (60.43%), Query Frame = 3 Query: 576 PESVSHMKRRPLDRYCTSPEAVKALIAKVDI-------------------------------KRSAADTNFDASVPTFAKDYL-SHGVQRPDWVVTSPPYKGAIKFVKAALAVATNGVALKLPLSFLEPCGDRGEWFQNNAPSACVFLRRAAFTPAH-VTVGEFWGVWYK---APTHDAPTRLVFCP 1028 PE V+H KRR LDRYCT PEAV+ L V I R +A TN DAS+ +F ++ ++ ++PDWVVTSPPYKGA+ FVKAALAVAT GVALKLPLSFLEPC DRG W +N P+ C+FLRRA +T AH V VGEFWGVWY +RLVFCP Sbjct: 115 PEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYTHAHHVKVGEFWGVWYTDGGCCGKSGGSRLVFCP 301
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 163 bits (413), Expect = 8.170e-44 Identity = 84/168 (50.00%), Postives = 99/168 (58.93%), Query Frame = 3 Query: 576 PESVSHMKRRPLDRYCTSPEAVKALIAKVDIKRSAAD-------------------------------TNFDASVPTFAKDYLS-HGVQRPDWVVTSPPYKGAIKFVKAALAVATNGVALKLPLSFLEPCGDRGEWFQNNAPSACVFLRRAAFTPAHVTVGEFWGVWY 983 PE V +KRR +DRYCTSP ++AL+ V I D TN DAS +F D+L+ H Q+PDW+VTSPPYKGA+ FVKAAL VA GVALKLPLSFLEPC DR W Q N P+ C+ + RA + PAHV VGEFWGVWY Sbjct: 57 PEPVKQLKRRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAHVRVGEFWGVWY 224
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.780e-43 Identity = 94/202 (46.53%), Postives = 115/202 (56.93%), Query Frame = 3 Query: 546 RKRQQVVAWV--PESVSHMKRRPLDRYCTSPEAVKALIAKVDIK-------------------------------------RSAADTNFDASVPTFAKDYLSHGVQR-PDWVVTSPPYKGAIKFVKAALAVATNGVALKLPLSFLEPCGDRGEWFQNNAPSACVFLRRAAFTPAHVTVGEFWGVWYKAP---THDAPTRLVF 1022 R R + W PE H+KRR LDRYCTS AV+AL+ V++ R A DT+ DAS TFA ++L+ G Q+ P+ VV SPPYKGA+KFVKAAL VA +GVALK LSFLEPC DR +W + N P+ CVFLRRA++TP HV +GEFWGVWY T T+LVF Sbjct: 93 RNRSEAATWTSAPEPAVHVKRRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLRRASYTPEHVMMGEFWGVWYCTGGDRTAVGGTKLVF 294
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Match: A0A6H5KAM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM1_9PHAE) HSP 1 Score: 154 bits (388), Expect = 1.940e-41 Identity = 75/128 (58.59%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 657 KVDIKRSAADTNFDASVPTFAKDYLS-HGVQRPDWVVTSPPYKGAIKFVKAALAVATNGVALKLPLSFLEPCGDRGEWFQNNAPSACVFLRRAAFTPAHVTVGEFWGVWYKAPTHDA---PTRLVFCP 1028 KV + + + DTN DAS ++A DYL+ H Q+PDWVV SPPYKGA+ FVKAAL VA GVALKLPLSFLEPC DR W Q N PS C+ + RA + PAHV VGEFWGVWY + T+L F P Sbjct: 4 KVVVCKLSPDTNLDASSTSYADDYLAAHNGQQPDWVVASPPYKGALSFVKAALTVAKEGVALKLPLSFLEPCADRAGWLQENPPSLCMMMSRARYQPAHVRVGEFWGVWYPPGGGSSIGDSTKLSFLP 131
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 154 bits (389), Expect = 1.140e-40 Identity = 86/185 (46.49%), Postives = 109/185 (58.92%), Query Frame = 3 Query: 576 PESVSHMKRRPLDRYCTSPEAVKALIAKVDIK------------------RSA-------------ADTNFDASVPTFAKDYLS-HGVQRPDWVVTSPPYKGAIKFVKAALAVATNGVALKLPLSFLEPCGDRGEWFQNNAPSACVFLRRAAFTPAH-VTVGEFWGVWY-KAPTHDAPTRLVFCP 1028 PE +H++RR LDRYCTSPEA+ A + VDI RS ADTN DAS+ +F +D+L+ + +RP+WV TSPPY A+ FVKAA+++AT GV K+ + FLEPC D G W Q N PS CVFLRRA +T A+ EFWGVWY + + TRLVFCP Sbjct: 16 PEPQTHLRRRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRALTFVKAAMSLATKGVTFKMHIFFLEPCADWGGWLQTNPPSLCVFLRRAKYTRANNAKTSEFWGVWYTQEMSCRNRTRLVFCP 200
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Match: A0A6H5JSV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV3_9PHAE) HSP 1 Score: 146 bits (369), Expect = 3.910e-38 Identity = 70/119 (58.82%), Postives = 82/119 (68.91%), Query Frame = 3 Query: 684 DTNFDASVPTFAKDYLS-HGVQRPDWVVTSPPYKGAIKFVKAALAVATNGVALKLPLSFLEPCGDRGEWFQNNAPSACVFLRRAAFTPAHVTVGEFWGVWY---KAPTHDAPTRLVFCP 1028 DTN DAS +F D+L+ H Q+PDWVVT PPY GA+ FVKAAL VA GVALKLPLSFLEPC DR W Q N P+ C+ + RA + PAHV VGEFWGVWY + T+L+F P Sbjct: 54 DTNLDASSASFTDDFLAAHHEQQPDWVVTRPPYNGALAFVKAALPVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAHVRVGEFWGVWYPPGSGYSSSDSTKLLFVP 172
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Match: A0A6H5JT40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT40_9PHAE) HSP 1 Score: 144 bits (362), Expect = 1.190e-37 Identity = 71/125 (56.80%), Postives = 86/125 (68.80%), Query Frame = 3 Query: 666 IKRSAADTNFDASVPTFAKDYLS-HGVQRPDWVVTSPPYKGAIKFVKAALAVATNGVALKLPLSFLEPCGDRGEWFQNNAPSACVFLRRAAFTPAHVTVGEFWGVWY---KAPTHDAPTRLVFCP 1028 + R + DTN DAS +FA DYL+ H Q+PDWVV+SPPY+GA+ FVKAAL VA GVALKLPLSFLEPC DR W Q N P+ C+ + RA + PA V VGEF GVWY + T+L+F P Sbjct: 8 VLRLSPDTNLDASSASFADDYLAAHNGQQPDWVVSSPPYEGALAFVKAALTVAKEGVALKLPLSFLEPCADRAVWLQANPPALCMMMSRARYQPALVRVGEFRGVWYPPGSGSSSSDSTKLLFLP 132
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 143 bits (360), Expect = 3.780e-37 Identity = 69/119 (57.98%), Postives = 87/119 (73.11%), Query Frame = 3 Query: 681 ADTNFDASVPTFAKDYLS-HGVQRPDWVVTSPPYKGAIKFVKAALAVATNGVALKLPLSFLEPCGDRGEWFQNNAPSACVFLRRAAFTPAH-VTVGEFWGVWY-KAPTHDAPTRLVFCP 1028 ADTN +AS+ F +D+L+ + +RP+WVVTSPPY A+ FVKAA+++AT GVA K+P+ FLEPC DRG W Q N PS CVFLRRA +T A+ GEFWGVWY + + TRLVFCP Sbjct: 30 ADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKYTRANNAKTGEFWGVWYPQEMSCRNRTRLVFCP 148
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 137 bits (345), Expect = 4.410e-34 Identity = 73/154 (47.40%), Postives = 92/154 (59.74%), Query Frame = 3 Query: 573 VPESVSHMKRRPLDRYCTSPEAVKALIAKVDIKRSAAD------------------------------------TNFDASVPTFAKDYL-SHGVQRPDWVVTSPPYKGAIKFVKAALAVATNGVALKLPLSFLEPCGDRGEWFQNNAPSACVFL 923 +PE H+KRR LDRYCTSPEAV+AL+ V+++ D TN DAS+ +FA D+L + QRPDWV+TSPPYKGA+++VK+AL++A GVALKLPLSFLEPC DRG W Q N P+ CVF Sbjct: 68 IPEPRKHIKRRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVFF 221
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.800e-33 Identity = 64/102 (62.75%), Postives = 73/102 (71.57%), Query Frame = 3 Query: 732 SHGVQRPDWVVTSPPYKGAIKFVKAALAVATNGVALKLPLSFLEPCGDRGEWFQNNAPSACVFLRRAAFTPAH-VTVGEFWGVWYK--APTHDAPTRLVFCP 1028 +H ++PDWVVTSPPYKGA+ FVKA LAVA GVAL+LPLSF +PC DRG W +N P C FLRRA +T AH V VGEFWGVWY +RLVFCP Sbjct: 31 AHPGKQPDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLRRAKYTHAHHVKVGEFWGVWYTDGGCGKSGGSRLVFCP 132 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17094.4738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17094.4738.1 >prot_L-elsbetiae_contig17094.4738.1 ID=prot_L-elsbetiae_contig17094.4738.1|Name=mRNA_L-elsbetiae_contig17094.4738.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp MATGSASPTAESRGESASSLANMVSRRRSRHYSREPAELFRSTKQESRDMback to top mRNA from alignment at L-elsbetiae_contig17094:526..2715- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17094.4738.1 ID=mRNA_L-elsbetiae_contig17094.4738.1|Name=mRNA_L-elsbetiae_contig17094.4738.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2190bp|location=Sequence derived from alignment at L-elsbetiae_contig17094:526..2715- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17094:526..2715- >mRNA_L-elsbetiae_contig17094.4738.1 ID=mRNA_L-elsbetiae_contig17094.4738.1|Name=mRNA_L-elsbetiae_contig17094.4738.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1320bp|location=Sequence derived from alignment at L-elsbetiae_contig17094:526..2715- (Laminarionema elsbetiae ELsaHSoW15)back to top |