mRNA_L-elsbetiae_contig1709.4736.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Match: D8LMZ4_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMZ4_ECTSI) HSP 1 Score: 140 bits (353), Expect = 2.450e-37 Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 3 Query: 66 MVIARSLKDAARLGSVTTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLSRLGNLRELDVAENQLGILPEPVFELP 296 MVIARSLKDAARLGS TTSLLLRRSEDLVCQNLMCAK+G ACVCRLAVHLSRLG L+ELDVAEN LG+LPEPVFELP Sbjct: 1 MVIARSLKDAARLGSATTSLLLRRSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLKELDVAENDLGVLPEPVFELP 77
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Match: A0A1V9ZV51_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZV51_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 6.650e-21 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 3 Query: 69 VIARSLKDAARLGSVTTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLSRLGNLRELDVAENQLGILPEPVFELPNLEHLDVSGNGLKDLS 344 +IA+SL+DAA S L+LR+S+DLVC+NLMC ++G ACVC+L++ L RL L ELDV+EN+L +LP +F+L L+ L+VSGN L S Sbjct: 1 MIAKSLRDAATHTSSVQKLVLRKSQDLVCRNLMCERVGEACVCKLSLVLERLPQLEELDVSENKLQMLPPSIFQLSKLKQLNVSGNMLTSQS 92
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Match: A0A836CFY3_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFY3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.060e-16 Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 3 Query: 69 VIARSLKDAARLGSV--TTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLSRLGNLRELDVAENQLGILPEPVFELPN-LEHLDVSGN 326 ++A SL +A+ + SL+LR SEDL+C+N+MC KLGGAC+CRLAV L R L+ LD+A+N L LPE V E + L HLD+S N Sbjct: 9 LVAASLAEASSMAPQGGPVSLVLRSSEDLLCRNIMCEKLGGACLCRLAVCLGRCSGLQSLDLAKNGLATLPEAVLEQQHHLRHLDISDN 97
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Match: A0A485L6B7_9STRA (Aste57867_16664 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6B7_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 4.410e-16 Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 3 Query: 69 VIARSLKDAARLGSVTTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLSRLGNLRELDVAENQLGILPEPVFELPNLEHLDVSGNGLKD 338 +I RS++DAA LLLRRSEDL+C+NLMC ++G AC+CR ++ L +L L +LDV+ N L LP +F+LP LE L + N L D Sbjct: 332 MIVRSVRDAAMHMGAVKELLLRRSEDLLCRNLMCERVGEACICRFSLVLEKLPQLTKLDVSHNNLHALPPALFQLPRLEELSLGHNKLAD 421
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Match: T0QH27_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QH27_SAPDV) HSP 1 Score: 81.3 bits (199), Expect = 4.060e-15 Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 69 VIARSLKDAARLGSVTTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLSRLGNLRELDVAENQLGILPEPVFELPNL 302 +IA+SL+DAA S L+LR+SEDL+C NLMC ++G ACVC+L+V L RL L LDV+ N L LP +F L +L Sbjct: 1 MIAKSLRDAATHTSAVRQLVLRKSEDLLCMNLMCERVGEACVCKLSVVLERLPQLEHLDVSRNNLKSLPPAIFSLRHL 78
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Match: A0A6G0X207_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X207_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 7.800e-15 Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 3 Query: 69 VIARSLKDAARLGSVTTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLSRLGNLRELDVAENQLGILPEPVFELPNLEHLDVSGNGLKD 338 +I RS+++AA L+LR+SEDL+C+NLMC ++G AC+CRL++ L +L NL LDV+ N+L LP VF+L LE L ++ N L D Sbjct: 291 MIVRSVREAAMHMGAVRELILRQSEDLLCRNLMCERVGDACMCRLSIVLEKLPNLTTLDVSANRLPALPPSVFQLGRLEELVLAKNQLGD 380
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Match: A0A1V9Z9Y8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9Y8_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 9.130e-15 Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 3 Query: 69 VIARSLKDAARLGSVTTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLSRLGNLRELDVAENQLGILPEPVFELPN 299 +IA+SL++AA + LLLR+SEDLVC+NLMC ++G ACVC+L++ L RL L LDV+ N+LG LP V L N Sbjct: 1 MIAKSLREAATHTTAVRKLLLRKSEDLVCRNLMCERVGEACVCKLSLVLERLPELTHLDVSGNKLGALPPAVAALRN 77
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Match: A0A024GQG6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GQG6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.310e-14 Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 72 IARSLKDAARLGSVTTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLSRLGNLRELDVAENQLGILPEPVFELPNL 302 +A S + AA+ G+ T L+L +S+DLVC+NLMC ++GGAC CRLA L+ + L LD++ N+L +P+ VF L +L Sbjct: 5 VATSFRQAAKSGAATRELILNKSQDLVCKNLMCERIGGACACRLAHILTCVPKLTHLDLSNNELETIPDAVFSLQDL 81
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Match: F0WI42_9STRA (Uncharacterized protein AlNc14C107G6249 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WI42_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.430e-14 Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 72 IARSLKDAARLGSVTTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLSRLGNLRELDVAENQLGILPEPVFELPNLE 305 +A S +D A+ G+ L+L++S+DLVC+NLMC K+GGAC CRLA L+ + L LD++ N L +PE VF L +L+ Sbjct: 5 VATSFRDVAKNGATIKKLILKKSQDLVCKNLMCEKIGGACACRLAHILTCVPKLTHLDLSNNSLETIPEAVFGLQDLK 82
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Match: A0A8K1FBU8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBU8_PYTOL) HSP 1 Score: 78.6 bits (192), Expect = 4.380e-14 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 3 Query: 69 VIARSLKDAARLGSVTTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLSRLGNLRELDVAENQLGILPEPVFELPNLEHLD 314 V+ARSL+D AR G +LLL RS+DL+C+NLMC +G +C C+L++ L R+ LRE+D++ NQL LP F L L L+ Sbjct: 5 VVARSLRDVAR-GQRVQALLLARSQDLICKNLMCEHVGSSCACKLSLVLERVPELREMDLSGNQLRFLPVSTFALTQLTTLN 85 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1709.4736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1709.4736.1 >prot_L-elsbetiae_contig1709.4736.1 ID=prot_L-elsbetiae_contig1709.4736.1|Name=mRNA_L-elsbetiae_contig1709.4736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp MVIARSLKDAARLGSVTTSLLLRRSEDLVCQNLMCAKLGGACVCRLAVHLback to top mRNA from alignment at L-elsbetiae_contig1709:20367..22617+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1709.4736.1 ID=mRNA_L-elsbetiae_contig1709.4736.1|Name=mRNA_L-elsbetiae_contig1709.4736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2251bp|location=Sequence derived from alignment at L-elsbetiae_contig1709:20367..22617+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1709:20367..22617+ >mRNA_L-elsbetiae_contig1709.4736.1 ID=mRNA_L-elsbetiae_contig1709.4736.1|Name=mRNA_L-elsbetiae_contig1709.4736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=984bp|location=Sequence derived from alignment at L-elsbetiae_contig1709:20367..22617+ (Laminarionema elsbetiae ELsaHSoW15)back to top |