mRNA_L-elsbetiae_contig17007.4692.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 315 bits (808), Expect = 2.170e-98 Identity = 142/203 (69.95%), Postives = 172/203 (84.73%), Query Frame = 1 Query: 370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978 S+YE MDGHVIARSTAY ++ VINALNACPEL+C+WP+ D A AA F++RS+ +V++KC GA DGLF+RM K ++K+ EPN Y++GHKKGFGMNFQ +CDAQYRI+AW MNCPGSQND TAF FSGFDKLL LP+G F++GDAAY AS+RV+VPFPG+ L+ SQDA NY+ SQCRM IEQT+GI+VRRWGILWRPMEV Sbjct: 112 SIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEV 314
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 267 bits (683), Expect = 7.740e-80 Identity = 124/203 (61.08%), Postives = 158/203 (77.83%), Query Frame = 1 Query: 370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978 S++E MDG+VIARSTAY I RVI+A+N ELDC WP+ D + ++ RST VI+ C GAMDGLF+RM + + + P +++SGHKKGFGMNFQG+C+A+Y IIAWTMNCPGS ND TAFK S F +L+ LP G +I+GDAAYPASD+VLVP+PG+ LT SQDAYN++QSQ R+ IEQ FGIMV+ WGILWRP+++ Sbjct: 119 SVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDM 321
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 256 bits (655), Expect = 1.260e-75 Identity = 121/203 (59.61%), Postives = 153/203 (75.37%), Query Frame = 1 Query: 370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978 S++E MD +VIA+STAY I RVI+A+N +L+C+WP D A ++ RST VI++C GAMDGLF+R+ K P +++SGHKK FGMNFQGIC+A Y II WTMNCPGSQND TAFK SGFD LL ++P FI+GDAAYPAS+RVLVP PG+ LTLSQDAYN++QSQ R+ IEQ FGI+V+ W ILW+P+ + Sbjct: 123 SVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAI 325
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 253 bits (645), Expect = 4.400e-75 Identity = 116/203 (57.14%), Postives = 152/203 (74.88%), Query Frame = 1 Query: 370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978 S++E MDG V A+STAY I RVI+A+N E DC WP+ D + ++ RST VI C GAMDGLF+ + + + + P ++SGHKKGFGMNFQ +C+A+Y+I AWTMNCPGS ND TAFK SGF+++L+ LP G +I+GD AYPASD+VLVP+PG+ LT SQD+YN++QSQ R+ IEQ FG MV+ WGILWRP++V Sbjct: 53 SIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQV 255
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 236 bits (603), Expect = 4.580e-70 Identity = 104/147 (70.75%), Postives = 127/147 (86.39%), Query Frame = 1 Query: 538 EVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978 +V++KC GAMDGLF+RM K ++K+ EPN Y++GHK GFGMNFQ +CDAQYRI+AWTM+CPGSQND TAF F+ FDKLL LP+G F++GDAAY AS+RV+VPFPG+ L+ SQDA NY+ SQCRM IEQT+GI+VRRWGILWRPMEV Sbjct: 16 DVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEV 162
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 219 bits (558), Expect = 8.510e-62 Identity = 111/203 (54.68%), Postives = 138/203 (67.98%), Query Frame = 1 Query: 370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978 S+YE MDGHVIARSTAY ++ VINALNACPEL+C+WP+ D+ S + +V++KC GAMDGLF+RM K ++K+ EPN Y++GHKKGFGMNFQ +C SQND TAF FSGFDKLL LP+G F++G+AAY AS+RV+VPFPG+ EQT+GI+VRRWGILWRPMEV Sbjct: 123 SIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VC---------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRRWGILWRPMEV 293
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.610e-47 Identity = 95/203 (46.80%), Postives = 120/203 (59.11%), Query Frame = 1 Query: 370 SMYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978 S+YE MDGHVIARSTAY ++ VINALNACPEL+C+WP+A +V++KC GAMDGLF+RM K ++K+ EPN Y++GH+KG ++GDAAY AS+RV+VPFPG+ L+ SQDA N + SQ RM IEQT+GI+VRRWGILWRPMEV Sbjct: 123 SIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEA--------------RMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEV 263
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE) HSP 1 Score: 160 bits (404), Expect = 2.420e-39 Identity = 79/195 (40.51%), Postives = 124/195 (63.59%), Query Frame = 1 Query: 400 IARSTAYQISGRVINALNACPELD-CRWPKAVD-VANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978 +++ TA+ I +V++A+N+ E+ +P++ D A+ ++++ST + A DGLF++ T+ +T +Y+SG K G+G+N Q CDA YR + + PGS ND TA+ S ++ LP GF++LGDAAYP SD +L P+PG L L +DA+N++ SQ R+ IEQ FGI+V +WGILW+P+ V Sbjct: 155 VSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRV 349
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5KBS4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS4_9PHAE) HSP 1 Score: 153 bits (387), Expect = 1.460e-38 Identity = 94/233 (40.34%), Postives = 129/233 (55.36%), Query Frame = 1 Query: 316 CGSGRVPGCTDSTVARWWSMYEGMDGHV-IARSTAYQISGRVINALNACPEL---DCRWPKAVDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKG---FGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEVWGLGG 993 CGS R G D W G HV + YQI VI+A+N P + D K + NA + FKD+ST + A+DGLFI+ +K+T Y+SG K +G+N Q +C A YR+ A + PGS ND A+ S K + +LP GF I+GDAAYP +++L P+PG +L +D++N+ SQ R+ IEQ+FGI+V WGILWRP+ V LGG Sbjct: 16 CGSLRCRGVEDPG----WRQLLGCPTHVWLVGVVTYQILWDVIDAINNTPAVGAFDFPLTKEGCMRNA-NRFKDKSTDGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYSGSKSAKTAYGINVQAMCTADYRLCAMSAISPGSTNDWVAWTRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRV-QLGG 242
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE) HSP 1 Score: 157 bits (396), Expect = 1.760e-38 Identity = 78/191 (40.84%), Postives = 117/191 (61.26%), Query Frame = 1 Query: 412 TAYQISGRVINALNACPELDCRW-PKA-VDVANAASGFKDRSTFEVIKKCAGAMDGLFIRMNKLTSKDTTEPNNYFSGHKKGFGMNFQGICDAQYRIIAWTMNCPGSQNDLTAFKFSGFDKLLRQLPDGFFILGDAAYPASDRVLVPFPGSRLTLSQDAYNYFQSQCRMCIEQTFGIMVRRWGILWRPMEV 978 T Y VI+A+N+ PE+ + P+ D A+ FK +ST + C +DGLF++ + KDT Y+SG K +G+N Q +C A YR + + PG+ ND A+ S + + +LP GF++LGDAAYP S+++L P+PG L L +D++N+ SQ R+ IEQ+FGI+V WGILWRP++V Sbjct: 152 TVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKV 342 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17007.4692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17007.4692.1 >prot_L-elsbetiae_contig17007.4692.1 ID=prot_L-elsbetiae_contig17007.4692.1|Name=mRNA_L-elsbetiae_contig17007.4692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=212bp MYEGMDGHVIARSTAYQISGRVINALNACPELDCRWPKAVDVANAASGFKback to top mRNA from alignment at L-elsbetiae_contig17007:453..3399+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17007.4692.1 ID=mRNA_L-elsbetiae_contig17007.4692.1|Name=mRNA_L-elsbetiae_contig17007.4692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2947bp|location=Sequence derived from alignment at L-elsbetiae_contig17007:453..3399+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17007:453..3399+ >mRNA_L-elsbetiae_contig17007.4692.1 ID=mRNA_L-elsbetiae_contig17007.4692.1|Name=mRNA_L-elsbetiae_contig17007.4692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1272bp|location=Sequence derived from alignment at L-elsbetiae_contig17007:453..3399+ (Laminarionema elsbetiae ELsaHSoW15)back to top |