mRNA_L-elsbetiae_contig17.4680.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17.4680.1 vs. uniprot
Match: D7FWC6_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC6_ECTSI) HSP 1 Score: 1334 bits (3453), Expect = 0.000e+0 Identity = 926/1907 (48.56%), Postives = 1066/1907 (55.90%), Query Frame = 1
Query: 1 NQSAYKKLLAASLIVFHDKRTSTRHISTQTMVRMVGRLAVVQGADDIQTVVDKLHVPHPSRGGVDAIITDLDPKVPKLMEFLRMRSMRPGLGKLPIVAVIVVVDADEARPELLASAIESGVDAVMRRPLERAVLTSCVGEVLRRHASVEYVYKDVVGEVETFNYPRFLLEGFQFLGAAGESSVGGA-GDADGGFNDIVGEAVQTYTLQ-SGGSGNGSMSTMGSGVWAQDGLLAPNRGSVAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVVTIIQGGHVKISSPSLRPRLYLYPGDKGYVGGGTATGTSASGDXXXXXXXXXXXXXXXXXXXGSSVGAADRRAGGERQRLPLHEPRQVSHELAPFVKRRAPALGDPATSAG--LHKGTLARTMRLVENTFSFTRGQD-AETASRTGFMDAGSMVWSTRLPRACWVSKLHPHPSVRNWQAWRA----KGRRAASSVSGLSPAAAIATGXXXXXXXXXXXXXXXXXXXXGSSWKGAPRRTPRPESGNPVSQKKVFSSSGTQGRRAATRAGMFDEVTRSPQANTNPTEIASTANLRSALGVGVTGEAAARAVIGRMMRKRIRAKRAAARLATGDGGSRKDRG-----------HLERGELSGGRXXXXXXXXXXXXXXXXXXXXXXXXXXNTLAATKAAKGIAGSGSGA--GLLEEGLFKTVLSSLAKKRLRTGLLEIKTNPTDVLRCGFVEIEPARYGSTALGCHLIRGWAEQKAGNKRRALGHYRKAVASEPENVEALFCKAVVSAQLMELFDALKDFSAAISFKLHEITPATLKKR-ASRTPGSGRATTAXXXXXXXXXXXXXXXXXXXXXGAATRGGSVEYGESNVGLAHLYGNRALVHVCLGDDASALDDLDRAVARDTRNITYRSNRALILRRVGDFRGAQQDYSRLRALQACTLEQAAADRSAACTRATSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAGAGRNNRDREAPPQRPQPAVDSVQPKPGATDSSSISAGGCCCPSAPLPSSIELRREQDAPAPSGKREDSSSGEDRGTVLRGGEVAAATASATTGHLAGPLPAVTTETTPPISTQAPTDVTINANSKKRTSVTXXXXXXXXXXXXSSNKEAGAKRTSINTSSGSNPATGEKIDARPSEEWSDQFRDRWLMEDTFRRRALLQQLVSPDAGGGTEYPEDGGGNGLCGKRXXXXXXXXXSFRKKSGQGDLGEFKTSMGLSAKGDLFDDLFCRPSDVDEALTTEPGRRTPEQMLHVVEALAACPTFVGLDNDTLAEIGNAVEYRVLEKMAPAFLQGEETDAMAVVLSGRVAVKMRRADLSVVTADELGPGDAFGDACMLDEHRALTSGRRDSLNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAEP--------SALPRGRLPLASTTSGQEAERDKRRLEXXXXXXAFPAGSGEAGLTDAVDGSRGGXXXXXXXPNANPNAGRSMETYQTLEPTRLVLVLKADFHRIPELLKHCSHTFERRLDAIKLSGLFGGWDHEDLMRLARMSRVHRHASKSILLMQRKEPSHLHIVLTGTCTVTKYPDRLAAVQRKINEIGAALYRIKSKYAYHRDVRTKVATSGTGSSSRIPAVAKIGSPFSGNVNVNGVGIGIVDGRPTFAPVVGRRQARLPRALLAECSAP-LSHVTSTEVRKAELEKDMRKWKRTLALIRRKDGDVVDTSQTQGVGTLQYPQFFGEMCLLVPDGGEALGTVSTDTLVETVSMSKFVLQTFHVTDTFLQGVRQKSSIYPEDIHLAKAIEAERWWEVRRRELVLEALIGPAA-GIGGGSWKHRNQRLIRKRPKRSATTS 5622
N +A+K+LLA SLIVFHDKR+S+R ++TQ MVR+VGRLAVVQGADDI VV+KLHVPH SR GV+AIITDLDPK+PKLME LR+RS+RPGLGKLPIV+VIVVVD D+ RPELLASAIESGVDAV+RRPLER+ TSCVGEVLR+HASVE+VYKDVVGEVETFNYPRFLLEGF FLG SVGG G+ D FN+I G+AV+TYT + S GSGNGS++T+G+G WAQDG+++PN G+ XXXXXX KV+T ++GGHVKI+SPSLRPRLYLY GDKGYVGGG +T +A+ D SS G ++ GG R ++ V RR + S G GT + V SFT A TA+ G AGS + + R R + P P V RA + R ++ + + PAA SW+ A R PRP+ GNPVSQKK+F+++GTQGRRAATRAGMFDEV R Q N NPTE+AST NLRSALGV VTGEAAAR VIGRM++ R K A+ A +GG RG RG L+GGR K KG++ S G GLL EG+FKTVLSS+AKKRLR GL EIK+NP D+LR GFVE+EP ++GSTALGCHLI+GW EQ GNK RALGH+R+AVASEPENVEALFCKAV+SAQLMELFDALKDFSAAISFKL E A L++R AS T TA XXXXXXXXXXXXXXXX +SNV LAHLYGNRALVHVCLGDD SALDDLDRAVARDTRNITYRSNRALILRRVGDFRGAQQDYSR+RALQ LEQ AADRSA + P N A A + + K GAT ++ + G +G + GG SA A LP+ TT + + + R V N GA I T S K A P R++ + + GG DG + S K L EFK SMGLSAKG+LFDDLFCRPS +DEALTTEPGRRTPEQ++HVVEALAACP F GL+ + + EIGNAVEYRVL+KM+ AFLQGEE DAM V+LSGRVAVK+RRAD SVVTADELGPGD FG+ACMLDEHR +T+ RR + N N PP P S PR +P T + E E P G G GS ++P GRSMETYQTLEPTRLVL+LK DF+R+P LLKHC+H F+RRLDAIKL GLFGGW+HEDLMRL RMSR+HRH SKS+LLMQRKEPSHLHIVL+G CTVTKYPDRL+AVQRKINEIGAALYRIKSKY+YHRDVRTKV + P+ R R A S P LS V T T+ VG LQYPQFFGE+CLLVPDGGEALGTVS DTLVETVSMSKFVLQTFHVTDTFLQGVRQK+SIYPEDI+LAKAIE ++WWEVRRRELVLE LIGPAA GGG WKH+NQ L+RKRPKRS S
Sbjct: 60 NTAAHKRLLAESLIVFHDKRSSSRQLATQIMVRLVGRLAVVQGADDIIAVVEKLHVPHASRSGVNAIITDLDPKIPKLMESLRLRSLRPGLGKLPIVSVIVVVDPDDLRPELLASAIESGVDAVIRRPLERSSFTSCVGEVLRKHASVEFVYKDVVGEVETFNYPRFLLEGFHFLGVGETGSVGGGVGEGDSTFNEIAGDAVRTYTKEASTGSGNGSVTTVGTGGWAQDGIVSPNGGNAG------------------------QSEAPLPTPXXXXXXASTTATDATGFGSAARKSSRQAATARMMGKTKVLTTMRGGHVKITSPSLRPRLYLYTGDKGYVGGGGST-MNANTDSRDGGKR-------------SSAGCSNGGVGGSXXXXXXXGDRDRQNQGGTEVDRRVESERQAWQSKGRTAAAGTSSSLRPSVPTPGSFTTSAGHAPTAAGHG---AGSGLRAQRNAR---IGPGFP-PGVGIIPPGRALPQNRTRPPKTTGTAVGPAAE-------------------------GSWRAATVRAPRPDEGNPVSQKKIFNATGTQGRRAATRAGMFDEVLRRDQTNANPTEMASTGNLRSALGVVVTGEAAARLVIGRMIQNR---KARMAKTAMSNGGEDGSRGAGACAYGPISKRAPRGGLTGGRSMAAGRDRGGRGGSAGALKR------------KPVKGVSTSAGGVSGGLLGEGIFKTVLSSMAKKRLREGLQEIKSNPLDLLRRGFVEVEPTKHGSTALGCHLIKGWEEQTNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMELFDALKDFSAAISFKLDETHRAALQQRGASNTKRPSNGVTASGSAGXXXXXXXXXXXXXXXXXXXXXX------KSNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVARDTRNITYRSNRALILRRVGDFRGAQQDYSRIRALQ--ILEQTAADRSATQETISRPATPAVKDGPH------------------------TGSIALNGSPTTAGAAGAAEATGAPEEKGGATRPWAVKSHG-----------------------------------KG-ISSGGGGLVPDGSAAVHARARSLPSAGARTTTAVVAEPGVGTVEKPTAGHREHVQRCASSPLLERTSHGNVGVGAV---IPTPGKSLLLEENKTPASPGH----------------GGRSIEEHKGTAQDGGSAAAAADGPATSST-RTGTATMTTGYSLPKGRQGASLVEFKASMGLSAKGELFDDLFCRPSFLDEALTTEPGRRTPEQVVHVVEALAACPAFDGLEKEVMIEIGNAVEYRVLDKMSAAFLQGEEIDAMVVILSGRVAVKLRRADFSVVTADELGPGDTFGEACMLDEHR-ITAQRRRNSNCNENACEGAQGSGGADK---------------------------------PPGSPTSPREVNDSESPRVVVPKDKGTPEYQPE------EPLTEGAGLPGRGGTGGRARVGSGS-----------GSSPGTGRSMETYQTLEPTRLVLILKRDFYRMPGLLKHCAHAFKRRLDAIKLCGLFGGWEHEDLMRLTRMSRIHRHPSKSVLLMQRKEPSHLHIVLSGACTVTKYPDRLSAVQRKINEIGAALYRIKSKYSYHRDVRTKVVLAD--------------------------------------PIRARYAKRSLSERYAVGSEPWLSFVEKT---------------------------------TRSVGNLQYPQFFGEVCLLVPDGGEALGTVSADTLVETVSMSKFVLQTFHVTDTFLQGVRQKASIYPEDINLAKAIEVDKWWEVRRRELVLETLIGPAATASGGGGWKHKNQALVRKRPKRSKRPS 1671
BLAST of mRNA_L-elsbetiae_contig17.4680.1 vs. uniprot
Match: A0A6H5K1M1_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M1_9PHAE) HSP 1 Score: 806 bits (2081), Expect = 3.890e-258 Identity = 654/1473 (44.40%), Postives = 756/1473 (51.32%), Query Frame = 1
Query: 925 KVVTIIQGGHVKISSPSLRPRLYLYPGDKGYVGGG----------------TATGTSASGDXXXXXXXXXXXXXXXXXXXGSSVGAADRRAGGERQRLPLHEPRQVSHELAPFVKRRAPALGDPATSAGLHKGTLARTMRLVENTFSFTRGQDAETASRTGFMDAGSMVWSTRLPRACWVSKLHPHPSVRNWQAWRAKGRRAASSVSGLSPAAAIATGXXXXXXXXXXXXXXXXXXXXGSSWKGAPRRTPRPESGNPVSQKKVFSSSGTQGRRAATRAGMFDEVTRSPQANTNPTEIASTANLRSALGVGVTGEAAARAVIGRMMRKRIRAKRAAARLATG--DGGSRKDRGHLERGELSGGRXXXXXXXXXXXXXXXXXXXXXXXXXXNTLAATKAAKGIAGSGSGA--GLLEEGLFKTVLSSLAKKRLRTGLLEIKTNPTDVLRCGFVEIEPARYGSTALGCHLIRGWAEQKAGNKRRALGHYRKAVASEPENVEALFCKAVVSAQLMELFDALKDFSAAISFKLHEITPATLKKR-ASRTPGSGRATTAXXXXXXXXXXXXXXXXXXXXXGAATRGGSVEYGESNVGLAHLYGNRALVHVCLGDDASALDDLDRAVARDTRNITYRSNRALILRRVGDFRGAQQDYSRLRALQACTLEQAAADRSA---ACTRATSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAGAGRNNRDREAPPQRPQ--------------------PAVDSVQ----PKPGATDSSSISAG---GCC-------------CPSAPL-----------------PSSIELRREQDAPAPSGKREDSSSGEDRGTVLRGGEVAAATASATTGHLAGPLPAVTTETTPPISTQAPTDVTI-NANSKKRTSVTXXXXXXXXXXXXSSNKEAGAKRTSINTSSGSNPATGEKIDAR----PSEEWSDQFRDRWLMEDTFRRRALLQQL-VSPDAGGG---TEYP-EDGGGNGLCGKRXXXXXXXXXSFRKKSGQG-DLGEFKTSMGLSAKGDLFDDLFCRPSDVDEALTTEPGRRTPEQMLHVVEALAACPTFVGLDNDTLAEIGNAVEYRVLEKMAPAFLQGEETDAMAVVLSGRVAVKMRRADLSVVTADELGPGDAFGDACMLDEHRALTSGRRDS-LNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAEPSALPRGRLPLASTTSGQEAERDKRRLEXXXXXXAFPAGSGEAGLTDAVDGSRGGXXXXXXXPNANPNAGRSMETYQTLEPTRLVLVLKADFHRIPELLKHCSHTFERRLDAIKLSGLFGGWDHEDLMRLARMSRVHRHASKSILLMQRK------------------------------------------EPSHLHIVLTGTCTVTKYPDRLAAVQRKINEIGAALYRIKSKYAYHRDVRTKV 4938
KV+T ++GGHVKI+SPSLRPRLYLYPGDKGYVGGG ++TG S G XXXXXXX G+ + DRR ERQ + R+V+ + + + P G T AG T A + ++A +D G P V+ P +R R + R ++ + PAA SWK A R PRP+ GNP+ QKK+F+++GTQGRRAATRAGMFDEV RS Q N NPTE A+T NLRSALGV VTGEAAARAVIGRM+R R +AK A ++ G D S G G +S G + K AKG++ S G GLL EG+FKTVLSS+AKKRLR GL EIK+NP D+LR GF E+EPA++GSTALGCHLI+GW EQK GNK RALGH+R+AVASEPENVEALFCKAV+SAQLMELFDALKDFSAAISFKL E A L++ AS T TA G T G ESNV LAHLYGNRALVHVCLGDD SALDDLDRAVARDTRNIT GAQQDYSR+RALQ LEQ A DR+A +R ++P XXXXXXXXXXXXX + + +RP+ PA + P GA ++ + A G C S+PL P L E PA G + E GT GG VAAA T T + P Q T N + + XXXXXXXX T + A + IDA SE WSD FRD+ LMED FRRRALL++L +SP GG YP EDG G KR RK +G+G LGEFK SMGLSAKG+LFDDLFCRPS +DEALTTEPGRRTPEQ++HVVEALAACP F GL + + EIGNAVEYR+L+KM+ FLQGEETDAM V+LSGR AD SVVTADELGPGD FG+ACMLDEHR RR+S + N SA PR +P T + E E FP G GS XX GRSMETYQTLEPTRLVL+LK DF+RIP LLKHC+H F+RRLDAIKL GLFGGW+HEDLMRL RMSR+HRH SKS+LLMQRK EPSHLHIVL+G CTVTKYPDRL+AVQRKINEIGAALYRIKSKY YHRDVRTKV
Sbjct: 6 KVLTTMRGGHVKITSPSLRPRLYLYPGDKGYVGGGGSAMNANTDSHDRGERSSTGCSNGGVGGSXXXXXXXGDRDRRNQSGTEL---DRRVESERQAW-QSKGRRVAADTSSLFRPSIPTPGSFTTPAGHGPSTTAPSAAGXXXXXXXXXRRNAR-------IDLG-------FPPGVGVTP--PGGVIR-----RNRTRPPKTTGTAAGPAAE-------------------------GSWKAATVRAPRPDEGNPMCQKKIFNATGTQGRRAATRAGMFDEVLRSDQTNVNPTETATTGNLRSALGVVVTGEAAARAVIGRMIRNR-KAKMAKTAMSKGGEDCSSGVTVGACAHGPISKGADRGGKTGGRSKVACGDREGRGGSAG---VLKNKPAKGVSISAGGVSGGLLGEGIFKTVLSSMAKKRLREGLHEIKSNPLDLLRRGFAEVEPAKHGSTALGCHLIKGWEEQKNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMELFDALKDFSAAISFKLDETHRAALRQSGASNTKRPSNWVTASGNAAGVYTHGRDGGEARTGQGGGTSG------ESNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVARDTRNIT----------------GAQQDYSRIRALQ--MLEQTATDRNAIQETISRPSTPAVKDGPHTGSIALNGSPTTAAXXXXXXXXXXXXXXXXGATGAPEEKGGARRPRAVKSHGKGISSSGGGLVSDGPAAMHARAKSLPSTGARSTTVVVAEPGVGMAEKPPAGHHEHVRRCTSSPLLEKTFLGEVGVGSVIPAPGKSLLLEENKTPASPGHGQRVM--EHEGTAQDGGSVAAAADGPATFITRTGAATRTAGYSLPKGRQGDTHTGCGNDRATDSNDIPAPPAXXXXXXXXXXXXXXXXXXXXXXTMTTRTTAGDKSIDAGLSSCSSEHWSDLFRDKRLMEDNFRRRALLRELHLSPTDGGEGRRNRYPDEDGRGGAESEKRNSGGCDR---LRKTTGKGASLGEFKASMGLSAKGELFDDLFCRPSFLDEALTTEPGRRTPEQVVHVVEALAACPAFDGLAKEVMIEIGNAVEYRLLDKMSAVFLQGEETDAMVVILSGR-------ADFSVVTADELGPGDVFGEACMLDEHRITAQRRRNSHCHENACEGAQGSRGADEPPGFFTSSRE---------------------------VNESASPRVAVPEDKGTQQHQPE------EPLTEGAGFPGREGAGCRARITSGSX-------XXXXXXXXXGRSMETYQTLEPTRLVLILKRDFYRIPGLLKHCAHAFKRRLDAIKLCGLFGGWEHEDLMRLTRMSRIHRHPSKSVLLMQRKILSQSPVYRQTLLSLLPLLRLKWMPLYVHAVPPVGPHFDAKKEPSHLHIVLSGACTVTKYPDRLSAVQRKINEIGAALYRIKSKYTYHRDVRTKV 1348
BLAST of mRNA_L-elsbetiae_contig17.4680.1 vs. uniprot
Match: A0A7S3XP60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP60_HETAK) HSP 1 Score: 155 bits (392), Expect = 1.380e-36 Identity = 103/322 (31.99%), Postives = 156/322 (48.45%), Query Frame = 1
Query: 4552 TYQTLEPTRLVLVLKADFHRIPELLKHCSHTFERRLDAIKLSGLFGGWDHEDLMRLARMSRVHRHASKSILLMQRKEPSHLHIVLTGTCTVTKYPDRLAAVQRKINEIGAALYRIKSKYAYHRDVRTKVATSGTGSSSRIPAVAKIGSPFSGNVNVNGVGIGIVDGRPTFAPVVGRRQARLPRALLAECSAPLSHVTSTEVRKAELEKDMRKWKRTLALIRRKDGDVVDTSQTQGVGTLQYPQFFGEMCLLVPDGGEALGTVSTDTLVETVSMSKFVLQTFHVTDTFLQGVRQKSSIYPEDIHLAKAIEAERWWEVRRRELV 5517
+Y +P L+L+L+ DF R+ L H +++ +K SG+F GW DL+RLA M+++ + ++ Q +P L + G C V KYPDR A V+RK+ E+ L+R+ KY YH +R K GV I + P +H T +E +K ELE +++ W+ LA I+++ G T + V TL P FGEM L P G ALG+V +DTLVET+ + K VLQTF ++D L +R+K + P+D+ LA EA+ W +R+ +V
Sbjct: 110 SYYVEQPVELLLLLREDFDRL--LRDHSHARMKKKYQDLKHSGVFAGWPTGDLLRLASMAQIKVFPRNTTIVQQAVQPQSLFFLTKGVCRVMKYPDREAQVRRKVEELNKELHRLNIKYTYHHTLRGK-----------------------------GVDAYINEWGP-------------------------NHNTLSEQKKIELEAEIKFWEDQLAGIKKRPGTADKTKDGRQVATLLPPAIFGEMAALDPHKGVALGSVVSDTLVETLRVHKIVLQTFDISDEVLARLRRKGARCPDDLALAARAEADDAWAKKRQRVV 375 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17.4680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17.4680.1 >prot_L-elsbetiae_contig17.4680.1 ID=prot_L-elsbetiae_contig17.4680.1|Name=mRNA_L-elsbetiae_contig17.4680.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1845bp MVRMVGRLAVVQGADDIQTVVDKLHVPHPSRGGVDAIITDLDPKVPKLMEback to top mRNA from alignment at L-elsbetiae_contig17:622..32365- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17.4680.1 ID=mRNA_L-elsbetiae_contig17.4680.1|Name=mRNA_L-elsbetiae_contig17.4680.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=31744bp|location=Sequence derived from alignment at L-elsbetiae_contig17:622..32365- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17:622..32365- >mRNA_L-elsbetiae_contig17.4680.1 ID=mRNA_L-elsbetiae_contig17.4680.1|Name=mRNA_L-elsbetiae_contig17.4680.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=11070bp|location=Sequence derived from alignment at L-elsbetiae_contig17:622..32365- (Laminarionema elsbetiae ELsaHSoW15)back to top |