mRNA_L-elsbetiae_contig16992.4679.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Match: A0A6H5L0S0_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S0_9PHAE) HSP 1 Score: 180 bits (456), Expect = 6.850e-48 Identity = 97/152 (63.82%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 284 SAGVRMVSVLFHTEGARQAQ*LSFRECTDYKEDSLRWNMRPSFPYIFELGRLDVNYKLGRLPTVGRNSQ-----------------SVLLAALS-----------GQALLMAMGELERAVLDSRINPACSSRIFLHMMPELSVMPEDVVVEW 655 +AGVRMVS+LF T+GARQ + LSFREC DYKED +R +MRPSFPYIFELGRLDVNYKL RLPTVGRNSQ ++ L A+S QALLMAM ELERA+LDSR+NPACSSRIFLHMMPEL+ +P DVV EW Sbjct: 1127 NAGVRMVSLLFQTDGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLDVNYKLERLPTVGRNSQIYLGVERGGALKRATPQTLFLRAISHRPETYTMEGANQALLMAMDELERAMLDSRVNPACSSRIFLHMMPELNAVPSDVVAEW 1278
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Match: D7FZG6_ECTSI (Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG6_ECTSI) HSP 1 Score: 179 bits (454), Expect = 1.100e-47 Identity = 97/152 (63.82%), Postives = 110/152 (72.37%), Query Frame = 2 Query: 284 SAGVRMVSVLFHTEGARQAQ*LSFRECTDYKEDSLRWNMRPSFPYIFELGRLDVNYKLGRLPTVGRNSQ-----------------SVLLAALS-----------GQALLMAMGELERAVLDSRINPACSSRIFLHMMPELSVMPEDVVVEW 655 +AGVRMVS+LF T+GARQ + LSFREC DYKED +R +MRPSFPYIFELGRLDVNYKL RLPTVGRNSQ ++ L A+S QALLMAM ELERA+LDSR+NPACSSRIFLHMMPEL+ +P DVV EW Sbjct: 74 NAGVRMVSLLFQTDGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLDVNYKLERLPTVGRNSQIYLGVERGGALKRATPQTLFLRAISHRPETYTMEGANQALLMAMDELERAMLDSRVNPACSSRIFLHMMPELNAVPGDVVAEW 225
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Match: A0A836CCC4_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC4_9STRA) HSP 1 Score: 125 bits (314), Expect = 6.270e-29 Identity = 75/155 (48.39%), Postives = 93/155 (60.00%), Query Frame = 2 Query: 284 SAGVRMVSVLFHTEGARQAQ*LSFRECTDYKEDSLRWNMRPSFPYIFELGRLDVNYKLGRLPTVGRNSQ--------------------SVLLAALS-----------GQALLMAMGELERAVLDSRINPACSSRIFLHMMPELSVMPEDVVVEW 655 S GVR VS LF + RQ + LSFREC+ + +D LR +MRPSFPYIFEL RL VNY L RL TVGRNSQ ++ L A+S +ALLMA+ ELERA+LD R++P SSR+FLHMMP+L + +VV W Sbjct: 1081 SGGVRGVSFLFR-QSPRQPRYLSFRECSGFVDDPLRRDMRPSFPYIFELERLSVNYDLERLATVGRNSQIYLGVERDAKVGKKPKVKPQTLFLRAISYRQETYSPEGANKALLMALDELERAMLDPRVSPTASSRVFLHMMPDLKMETGEVVTNW 1234
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Match: B5YMF5_THAPS (Acetyl-CoA carboxylase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMF5_THAPS) HSP 1 Score: 91.3 bits (225), Expect = 3.850e-17 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 290 GVRMVSVLFHTEGARQAQ*LSFRECTDYKEDSLRWNMRPSFPYIFELGRLDVNYKLGRLPTVGRNSQSVL------------------------LAALSG--QALLMAMGELERAVLDSRINPACSSRIFLHMMPELS-VMPEDVVVEW 655 G+R V+ L T G + SF +C +KED LR MRP+F ++ ELGRL+ N+ L R+P VGRN Q + L +SG +ALL + ELERA +S+++ SSRIFLH +PELS PE++ E+ Sbjct: 1140 GIRTVTALI-TRGKKDPSYYSFPQCNGFKEDPLRRGMRPTFHHLLELGRLEENFDLERIPAVGRNVQIYVGSEKSARRGAAKVVFVRGITHTPGLTTVSGARRALLQGLDELERAQANSKVDIQSSSRIFLHSLPELSGSTPEEIAKEF 1287
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Match: A0A0B4L7Y6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7Y6_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.860e-17 Identity = 56/153 (36.60%), Postives = 84/153 (54.90%), Query Frame = 2 Query: 293 VRMVSVLFHTEGARQAQ*LSFRECTDYKEDSLRWNMRPSFPYIFELGRLDVNYKLGRLPTVGRNSQSVL--------------------LAALSG-----------QALLMAMGELERAVLDSRINPACSSRIFLHMMPELSVMPEDVVVEWT 658 VRMV+VLF +GA+ + +F D+KED LR +MRP+FP + EL RL NY+L RLP++GRN+Q L + +S + LLMAM EL+ A+LD R+ + SSR+FL+++ + P+ + EW+ Sbjct: 1166 VRMVNVLF-VQGAKNPRYFTFTAVKDFKEDPLRRDMRPTFPQLLELSRLAANYELQRLPSIGRNTQVYLGSERAPVGTKKRGPGNQVLFVRGISHSEQTQTPMGAERVLLMAMDELDYALLDERVGGSASSRLFLNLLVPIDSDPKTLAGEWS 1317
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Match: Q39478_9STRA (Acetyl-CoA carboxylase n=1 Tax=Cyclotella cryptica TaxID=29204 RepID=Q39478_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 7.060e-17 Identity = 58/151 (38.41%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 290 GVRMVSVLFHTEGARQAQ*LSFRECTDYKEDSLRWNMRPSFPYIFELGRLDVNYKLGRLPTVGRN---------------SQSVLLAALSG-----------QALLMAMGELERAVLDSRINPACSSRIFLHMMPELS-VMPEDVVVEWTG 661 GVR V+ L G + SF +C+ +KED LR MRP+F ++ ELGRL+ N+ L R+P VGRN +Q V L A+S +ALL + ELERA +S+++ SSRI+LH +PE S PE++ E+ G Sbjct: 1141 GVRTVTALI-PRGKKDPSYYSFPQCSGFKEDPLRRGMRPTFHHLLELGRLEENFALERIPAVGRNVQIYVGSEKTARRNAAQVVFLRAISHTPGLTTFSGARRALLQGLDELERAQANSKVSVQSSSRIYLHSLPEQSDATPEEIAKEFEG 1290
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Match: I2CQP5_NANGC (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQP5_NANGC) HSP 1 Score: 90.5 bits (223), Expect = 7.080e-17 Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 2 Query: 293 VRMVSVLFHTEGARQAQ*LSFRECTDYKEDSLRWNMRPSFPYIFELGRLDVNYKLGRLPTVGRNSQSVLLA--ALSG----------------------------QALLMAMGELERAVLDSRINPACSSRIFLHMMPELSVMPEDVVVEW 655 VRMV+VLF +GA + +F ++KED LR +MRP+FP + EL RL NY+L RLP++GRN+Q L A +G + LLMAM EL+ A+LD R+ + SSR+FL+++ ++ PE + EW Sbjct: 1170 VRMVNVLF-VKGASNPRYYTFTAAENFKEDPLRRDMRPTFPQLLELSRLAANYELQRLPSIGRNTQVYLGTERAAAGVKKRGGSQVLFVRGISHSEQTQTPLGAERVLLMAMDELDYALLDPRVGGSASSRLFLNLLVPITTDPEALAGEW 1319
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Match: A0A7S4QWM1_9STRA (Acetyl-CoA carboxylase (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWM1_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 6.570e-15 Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 2 Query: 290 GVRMVSVLFHTEGARQAQ*LSFRECTDYKEDSLRWNMRPSFPYIFELGRLDVNYKLGRLPTVGRNSQSVL---------------------------LAALSG--QALLMAMGELERAVLDSRINPACSSRIFLHMMPEL 622 G+R V++ +T+ + L+F +C DYKE ++R NMRP+F ++ ELGRL+ N+ L R+ ++G+NSQ + + SG +ALL + ELERA +S++N SSRIFLH +PEL Sbjct: 1117 GIRSVNIA-NTQEKKNPIYLTFPQCDDYKESAIRRNMRPTFHHLLELGRLNENFDLERIDSIGKNSQVYIGSEKTSRPVRGGAPQVLFVRGLSHTPGITTKSGARRALLQGLDELERAQANSKVNLQSSSRIFLHSLPEL 1255
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Match: A0A7S2F2I2_9STRA (Acetyl-CoA carboxylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2I2_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.640e-11 Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 281 QSAGVRMVSVLFHTEGARQAQ*LSFRECTDYKEDSLRWNMRPSFPYIFELGRLDVNYKLGRLPTVGRNSQ-----------------SVLLAALSGQ-----------ALLMAMGELERAVLDSRINPACSSRIFLHMMPELSVMPED 640 Q G+R+V++L + + + SF C+ +KE LR +MRP+ ++ EL RL NY + R+ T RNSQ +V L ++S ALL+A+ EL+RAVLD R+ SSRIF +++P + E+ Sbjct: 1120 QKIGIRVVNLLV-AQDQKLPRYFSFESCSGFKEAPLRRDMRPTLYHLLELNRLVENYDITRMTTTARNSQLYLGVESKKVAKGPQPQAVFLRSISHSKYMGTEKGSEAALLLALDELDRAVLDGRVTVTTSSRIFCNVIPSMEANVEE 1266
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Match: A0A7S2RRG9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RRG9_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 9.640e-10 Identity = 47/126 (37.30%), Postives = 65/126 (51.59%), Query Frame = 2 Query: 332 RQAQ*LSFRECTDYKEDSLRWNMRPSFPYIFELGRLDVNYKLGRLPTVGRNSQSVL---------------------------LAALSG--QALLMAMGELERAVLDSRINPACSSRIFLHMMPEL 622 + Q SF C +KED LR NMR + Y+ ELGR++ NY+L RLP VGRN Q + L + G +AL+ + ELERA +S++ A SSRIF++ +PEL Sbjct: 1 KDPQFYSFPHCDGFKEDPLRRNMRATHHYLLELGRVNQNYELERLPAVGRNVQVYVGTERINKPTRGGPPQVLFVRGISHSRGLVTVPGAFRALVQGLDELERAQSNSKVK-ASSSRIFMYSLPEL 125 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16992.4679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16992.4679.1 >prot_L-elsbetiae_contig16992.4679.1 ID=prot_L-elsbetiae_contig16992.4679.1|Name=mRNA_L-elsbetiae_contig16992.4679.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp MLYVLSGYTIIVGGVCAHRGAWIFSHCCILTAENCSLGHHCTYGATPYLDback to top mRNA from alignment at L-elsbetiae_contig16992:442..2558- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16992.4679.1 ID=mRNA_L-elsbetiae_contig16992.4679.1|Name=mRNA_L-elsbetiae_contig16992.4679.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2117bp|location=Sequence derived from alignment at L-elsbetiae_contig16992:442..2558- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16992:442..2558- >mRNA_L-elsbetiae_contig16992.4679.1 ID=mRNA_L-elsbetiae_contig16992.4679.1|Name=mRNA_L-elsbetiae_contig16992.4679.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1458bp|location=Sequence derived from alignment at L-elsbetiae_contig16992:442..2558- (Laminarionema elsbetiae ELsaHSoW15)back to top |