mRNA_L-elsbetiae_contig1697.4673.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Match: D7FXS1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXS1_ECTSI) HSP 1 Score: 530 bits (1364), Expect = 6.110e-170 Identity = 450/780 (57.69%), Postives = 493/780 (63.21%), Query Frame = 1 Query: 1 MEELLGLDAGDFDDVDFAASDEEDSSDKGSTTGAAPAVSGALPAEGSSSVVDGVAPATEATSPSAVTTVIKSREITAFGSGSTAGSHSYIRSSASESKD-AVVDAERGAPLPEHARTGEESEAAAADVAAAAAINLPLLRRVERCCLESRPAEIETAVAALSSYLDTPGGATGSTANGTSPMEQGNKEEGARVAA----AAAPAALGMMSPEVAGAALTACRAALRLCRGEYEEILRETALFPAEKESSXXXXXXXXXGLRARVRAFVXXXXXXXXXXXXXXXXXXXXXXXXXX------------GDCNPAAVWRAAEAAWAGAAALSLFLQENYAGPELGADRTAALDAWFAEKLAGTYGGGXXXLKGSEEGGPAAGS----AAQDLANIALACDGELPYPQSSLAGALVAARTILTAVAGTXXXXXXXXXXXXXXXXXGRHAPGGHDASTAA--------WSADGPSASAL---VPGASTAAASTPKEAQQDAVFGDAVGRLSSASWWSARACVTHARLLISSSGRSDTLWREALGLFGRAVSLFGGGVAVAVXXXXXXXXGEAGGRESVGVSEKREDVARRVAGQVWLEWGLAQHHFQDPTKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASSAAPVDXXXXXXXXXAVGAVDPGELLPPVPPGGPGERSGGGTGLSAAAPGDXXXXXXXXXXXXXXXXXXXXXGVGDDKPAAAAVAGPELGMSTAVGEDGQRAAARQTVHAEDSALLEDISFVQRDLEKPGRLQ 2244 MEELLGL AGDF+ VDFAAS + D + +P A P G + +G+A A + S TTV+K R+ T G G G S SA ESK+ A VDA RGAPLPEHA GE AAAA AAA NLPLLRRVERCCLESRPAE+E AVAALSS++ G ++G S +G+ E A+ AAA + M P VA AAL ACRAALRLCRGEYE++LRETALF A+ +S + A VRAFV XXXXXXXXXXXXXXXXXXXXXXXX G AAVWRAAEAAWAGAAAL LFLQENYAGPELGADRT A+ AW A+ L GTYGG XXX AQDLANIAL CDGELPYPQSSL G+LV ARTIL AVAGT GR GH A TAA WS DG S + L G++ AA + F +AVG LSSA WWS RACVTHARLLISSSGRS+TLWREA GLFGRAVSLFGGG AVXXXXXXXXG +VARRV+GQVWLEWGLAQHHFQDP+KGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASSA PV + + PP PP A XX XXXXXXXXXXXXXXXX GPELGMSTAVGE+G+RAAAR+TVHAEDSALLEDISFVQRDLE PG+LQ Sbjct: 1 MEELLGLGAGDFEGVDFAASSDSDDEQVPNGIPDSPVDDPASPTSGPTE--NGMAAAPTDPASSTATTVVKPRDSTPVGDGPITGGGSP---SAGESKEEAAVDAVRGAPLPEHA--GEGPSAAAA----AAAANLPLLRRVERCCLESRPAEVEAAVAALSSHV------RGDASDGHS--REGSAETADVCASKDDKAAARVCVEAMPPAVARAALDACRAALRLCRGEYEDLLRETALFSADGCTSDGGGGSR--SIDACVRAFVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRRGCPGAAAVWRAAEAAWAGAAALCLFLQENYAGPELGADRTEAICAWCADVLVGTYGGXXXXXXXXXXXXXXXXXXXXXVAQDLANIALTCDGELPYPQSSLPGSLVLARTILMAVAGTGT---------------GRRNTPGHTAPTAASPEREAPVWSPDGFSFAVLPAAAGGSAVAAGGAGCGDSSEESFQEAVGSLSSAEWWSGRACVTHARLLISSSGRSETLWREARGLFGRAVSLFGGGAGPAVXXXXXXXXGA--------------EVARRVSGQVWLEWGLAQHHFQDPSKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASSATPVGEDAGH---------ETAPVAPPPPP----------------AXXXXXGETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPELGMSTAVGEEGRRAAARRTVHAEDSALLEDISFVQRDLENPGKLQ 705
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Match: K0SP38_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SP38_THAOC) HSP 1 Score: 97.4 bits (241), Expect = 2.140e-19 Identity = 66/152 (43.42%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 1396 FGDAVGRLSSASWWSARACVTHARLLISSSGRSD-----TLWREALGLFGRAVSLFGGGVAVAVXXXXXXXXGEAGGRESVGVSEKREDVARRVAGQVWLEWGLAQHHFQDPTKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVL 1836 F A L+SA WSARA V H RL+ + D TLW EA F +S GGG GGR G + R RRVA +V LEWGLAQHHF+ +GK SF+ A SGL +TGA GKRTKYQQ AQ ++ Sbjct: 28 FASAAACLASAPLWSARAIVAHRRLISTRRDDDDGNACPTLWNEAEATFAGCLSSLGGG---------------DGGRRPFGSDDARN---RRVASEVNLEWGLAQHHFRRVGRGKGSFSEALGISGLEVEVTGAEGKRTKYQQKATAQYLV 161
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Match: M4B454_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B454_HYAAE) HSP 1 Score: 103 bits (257), Expect = 5.570e-19 Identity = 62/154 (40.26%), Postives = 87/154 (56.49%), Query Frame = 1 Query: 1393 VFGDAVGRLSSASWWSARACVTHARLLISSSGRSDTLWREALGLFGRAVSLFGGGVAVAVXXXXXXXXGEAGGRESVGVSE--KREDVARRVAGQVWLEWGLAQHHFQDPTKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASS 1848 V G+ +GR+ SA+WW+ARA V H RLL+S S+TLW EA G +++ S+ E+ + + + ++EWGLAQHHF GK +F RAKE SG+T L+G+LGKRTKYQQ +AQ+VL+A+S Sbjct: 260 VLGELLGRIKSAAWWNARAAVAHERLLLSKQP-SNTLWFEA----------------------------RRGYIQTLTTSDLFAFEEDTQYLLARAYVEWGLAQHHFDKNKHGKATFERAKEISGVTVQLSGSLGKRTKYQQKSVAQMVLLAAS 384
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Match: A0A5D6Y333_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y333_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 8.880e-18 Identity = 62/149 (41.61%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 1411 GRLSSASWWSARACVTHARLLISSSGRSDTLWREALGLFGRAVSLFGGGVAVAVXXXXXXXXGEAGGRESVGVSEKREDVARRVAGQVWLEWGLAQHHFQDPTKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASSAAP 1857 G+L SASWW+ARA V H RLL++ S+TLW EA F RA+ R + + R ++ +EWGLAQHHF +GK SF RAKE SG++A L+G++GKRTK+QQ AQ+VL+A+S P Sbjct: 276 GKLHSASWWNARAAVAHERLLLTKES-SNTLWFEARRGFSRAI------------------------RHAALFDCPASEYLRA---RLEVEWGLAQHHFAKNRQGKRSFERAKELSGVSAQLSGSMGKRTKFQQKSTAQMVLLAASKHP 396
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Match: F0W833_9STRA (Tetratricopeptide repeat protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W833_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 3.040e-17 Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 1414 RLSSASWWSARACVTHARLLISSSGRSDTLWREALGLFGRAVSLFGGGVAVAVXXXXXXXXGEAGGRESVGVSEKREDVARRVAGQVWLEWGLAQHHFQDPTKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASS 1848 +++SASWW+ARA + H R+L++ S DTLW E F +++ +S+ + + A ++ +EWGLAQH F +GK +FA+A+ +GLTA L+GA+GK+TK+QQ+ +AQ+VL+ASS Sbjct: 200 KITSASWWNARASLAHQRILLAKSA-CDTLWNEVYAGFSAY-------------------------KDAQDISQGHCSLYKHTAARLHIEWGLAQHFFDKDNRGKANFAKAQSLTGLTAELSGAIGKKTKFQQNGVAQMVLLASS 318
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Match: A0A3M6VQ42_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQ42_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 8.010e-17 Identity = 58/153 (37.91%), Postives = 85/153 (55.56%), Query Frame = 1 Query: 1396 FGDAVGRLSSASWWSARACVTHARLLISSSGRSDTLWREALGLFGRAVSLFGGGVAVAVXXXXXXXXGEAGGRESVGVSE--KREDVARRVAGQVWLEWGLAQHHFQDPTKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASS 1848 G+ + ++ SA+WW+ARA V H RLL+S S+TLW EA G +++ +E E + + + ++EWGLAQHHF GK +FARAKE SG++ LTG++GKRTK+QQ +AQ+VL+A+S Sbjct: 262 LGELLEQIKSAAWWNARAAVAHERLLLSKQP-SNTLWFEA----------------------------RRGYIQTLKTNELFAFEKTTQYLHARAYVEWGLAQHHFDKNKHGKATFARAKEISGVSVQLTGSMGKRTKFQQKSVAQMVLLAAS 385
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Match: G4ZPH7_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZPH7_PHYSP) HSP 1 Score: 95.5 bits (236), Expect = 1.820e-16 Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = 1 Query: 1396 FGDAVGRLSSASWWSARACVTHARLLISSSGRSDTLWREALGLFGRAVSLFGGGVAVAVXXXXXXXXGEAGGRESVGVSE--KREDVARRVAGQVWLEWGLAQHHFQDPTKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASS 1848 G+ + ++ SA+WW+ARA V H RLL++ S+TLW EA G +++ +E E + + + ++EWGLAQHHF +GK +FARAKE SG+T L+G+LGKRTK+Q+ +AQ+VL+A+S Sbjct: 268 LGEMLEQIKSAAWWNARAAVAHERLLLAKQP-SNTLWFEA----------------------------RRGYIQTLKATELFAFEKDTQYLLARAYVEWGLAQHHFDKNKRGKSTFARAKEVSGVTVQLSGSLGKRTKFQRKSLAQMVLLAAS 391
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Match: A0A2P4XRT2_9STRA (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRT2_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.320e-16 Identity = 57/153 (37.25%), Postives = 85/153 (55.56%), Query Frame = 1 Query: 1396 FGDAVGRLSSASWWSARACVTHARLLISSSGRSDTLWREALGLFGRAVSLFGGGVAVAVXXXXXXXXGEAGGRESVGVSE--KREDVARRVAGQVWLEWGLAQHHFQDPTKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASS 1848 G+ + ++ SASWW+ARA V H RLL++ S+TLW EA G +++ +E E + + + ++EWGLAQHHF GK +FARAKE SG++ L+G++GKRTK+QQ +AQ+VL+A+S Sbjct: 264 LGEMLDQIKSASWWNARATVAHERLLLAKQP-SNTLWFEA----------------------------RRGYIQTLKTAELFAFEKDTQYLLARAYVEWGLAQHHFDKNKHGKSTFARAKEISGVSVQLSGSMGKRTKFQQKSVAQMVLLAAS 387
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Match: A0A662X4G8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4G8_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 4.180e-16 Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 1 Query: 1396 FGDAVGRLSSASWWSARACVTHARLLISSSGRSDTLWREALGLFGRAVSLFGGGVAVAVXXXXXXXXGEAGGRESVGVSEKREDVARRVAGQVWLEWGLAQHHFQDPTKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASS 1848 G+ + +L SA+WWSARA V H RLL++ S+TLW EA + + ++ A+ V+E + +AR ++EWGLAQHHF GK +FARA+E SG+T L+G++GKRTK+QQ +AQ+VL+A+S Sbjct: 265 LGEQLEQLKSAAWWSARAAVAHERLLLAKLP-SNTLWFEARRGYLQTLN------TPALFSP---------------VTETQYLLAR-----AYVEWGLAQHHFDKNKHGKRTFARAQELSGVTVQLSGSMGKRTKFQQKSVAQMVLLAAS 388
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Match: A0A2D4BS35_PYTIN (Tetratricopeptide repeat protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BS35_PYTIN) HSP 1 Score: 93.6 bits (231), Expect = 4.550e-16 Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 1 Query: 1417 LSSASWWSARACVTHARLLISSSGRSDTLWREALGLFGRAVSLFGGGVAVAVXXXXXXXXGEAGGRESVGVSEKREDVARRVAGQVWLEWGLAQHHFQDPTKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASSAAP 1857 LS+A+WW+ARA V H+RLLI+ S+TLW EA F R + R + + +++ + + +EWGLAQH F +GK SF A+E SGL+ L+G+LGKRTK+QQ +AQ+VL+A S P Sbjct: 234 LSTAAWWNARAAVVHSRLLIAKEP-SNTLWYEARRGFVRTL------------------------RHTTLFAVQQQGEGEYLRARAHVEWGLAQHFFDKNKQGKRSFETAQEISGLSVQLSGSLGKRTKFQQRSVAQMVLLAKSKYP 355 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1697.4673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1697.4673.1 >prot_L-elsbetiae_contig1697.4673.1 ID=prot_L-elsbetiae_contig1697.4673.1|Name=mRNA_L-elsbetiae_contig1697.4673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=748bp MEELLGLDAGDFDDVDFAASDEEDSSDKGSTTGAAPAVSGALPAEGSSSVback to top mRNA from alignment at L-elsbetiae_contig1697:16981..23335+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1697.4673.1 ID=mRNA_L-elsbetiae_contig1697.4673.1|Name=mRNA_L-elsbetiae_contig1697.4673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6355bp|location=Sequence derived from alignment at L-elsbetiae_contig1697:16981..23335+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1697:16981..23335+ >mRNA_L-elsbetiae_contig1697.4673.1 ID=mRNA_L-elsbetiae_contig1697.4673.1|Name=mRNA_L-elsbetiae_contig1697.4673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4488bp|location=Sequence derived from alignment at L-elsbetiae_contig1697:16981..23335+ (Laminarionema elsbetiae ELsaHSoW15)back to top |