mRNA_L-elsbetiae_contig1697.4672.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Match: D7FY68_ECTSI (Similar to Mitochondrial ornithine transporter 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY68_ECTSI) HSP 1 Score: 273 bits (698), Expect = 1.220e-85 Identity = 151/221 (68.33%), Postives = 169/221 (76.47%), Query Frame = 2 Query: 287 TGSGIDKLQRRTKKTKTEPPSPPVPASRLPSTLEHLVAGTVGGISGALVSYPLDTVRVRMQTNGNGRLLGPGRTASLLLKEAGVAGFYRGVLSPMVGTGLIKAAVFGGYGLCQGLVRRATGKESGELNLFHLGAAAMGSGLVGSFVVTPVERIKVVMQAALSSSXXXXXXXXXXXXXXXXXXXXXXYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPG 949 T G + ++ R ++T+ + P R+P+TLEHLVAGT GG+SGALVSYPLDTVRVRMQT G + LG RTAS+L +EAG+AGFYRGVLSPMVGTG+IKAAVFGGYGLCQ LVRR TGK++ ELNL LG AAMGSGLVGSFVVTPVERIKVVMQAALSSS YANAWGCARGLV+EHGLR GLYAGLGPTLLREVPG Sbjct: 78 TSPGANNIKLRLRETQK---TTSTPVRRVPTTLEHLVAGTFGGVSGALVSYPLDTVRVRMQTCG--KTLGAARTASMLFQEAGMAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTGKDNEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSSPSASSSLAARAGGG--------YANAWGCARGLVAEHGLRGGLYAGLGPTLLREVPG 285
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Match: A0A6H5KAN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN8_9PHAE) HSP 1 Score: 202 bits (513), Expect = 5.040e-60 Identity = 108/145 (74.48%), Postives = 115/145 (79.31%), Query Frame = 2 Query: 515 LLLKEAGVAGFYRGVLSPMVGTGLIKAAVFGGYGLCQGLVRRATGKESGELNLFHLGAAAMGSGLVGSFVVTPVERIKVVMQAALSSSXXXXXXXXXXXXXXXXXXXXXXYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPG 949 +L +EAGVAGFYRGVLSPMVGTG+IKAAVFGGYGLCQ LVRR TGK++ ELNL LG AAMGSGLVGSFVVTPVERIKVVMQAALSS+ YANAWGCARGLV+E GLRRGLYAGLGPTLLREVPG Sbjct: 1 MLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTGKDNEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSPLAARAGGG--------YANAWGCARGLVAERGLRRGLYAGLGPTLLREVPG 137
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Match: A0A0D2VZ19_CAPO3 (Solute carrier family 25 n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VZ19_CAPO3) HSP 1 Score: 115 bits (288), Expect = 8.800e-26 Identity = 80/212 (37.74%), Postives = 107/212 (50.47%), Query Frame = 2 Query: 356 VPASRL-PSTLEHLVAGTVGGISGALVSYPLDTVRVRMQTNGNGRLLGPGRTASL--LLKEAGVAGFYRGVLSPMVGTGLIKAAVFGGYG-LCQGLVRRATGKESG-----------ELNLFHLGAAAMGSGLVGSFVVTPVERIKVVMQAALSSSXXXXXXXXXXXXXXXXXXXXXXYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVP 946 VPA+R P +HL+ GTVGGI G + SYP DTV+VR+QT G L G ++K G Y G+LSP+VG +KA VFG YG + Q L+ R G +G +L+ F A+ +GLV + VVTPVER+KV MQA+ + + + C LV G+ GL+ G PT+LREVP Sbjct: 67 VPATRAAPKPAQHLLGGTVGGIMGIVASYPFDTVKVRIQTQPPGSALYTGMVDCFRKIIKSEGALALYSGMLSPVVGVAGVKAVVFGSYGGISQWLLARKQGVVAGSEQPQQQQQPVKLSGFENALASCSAGLVATIVVTPVERVKVSMQASGGKA----------------------FKSTLDCVLSLVRTAGISGGLFKGFVPTVLREVP 256
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Match: A0A7S1GME1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GME1_CYCTE) HSP 1 Score: 105 bits (263), Expect = 7.170e-23 Identity = 68/194 (35.05%), Postives = 105/194 (54.12%), Query Frame = 2 Query: 368 RLPSTLEHLVAGTVGGISGALVSYPLDTVRVRMQTNGNGRLLGPGRTASLLLKEAGVAGFYRGVLSPMVGTGLIKAAVFGGYGLCQGLVRRATGKESGELNLFHLGAAAMGSGLVGSFVVTPVERIKVVMQAALSSSXXXXXXXXXXXXXXXXXXXXXXYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPG 949 R S+++ L++G VGG+ LV YP D V+VR+QTN +L R +++ G+ GFYRG+ +P+VG I + F G+ + +VR GKE +L++ L A++GS + V+TP +R+KV+MQ ++ YAN+W CAR L E G++ LY G TL R++PG Sbjct: 10 RQDSSVKSLLSGGVGGMCSVLVGYPFDLVKVRIQTNSGDSILFVMRQ---VMRNEGIVGFYRGLAAPLVGVLPIGSFSFWGFDTGKRVVRSWVGKE--DLSVGQLCVASLGSAFATTLVITPSDRVKVLMQTQHTTMK---------------------YANSWDCARQLYKEGGIQS-LYKGTVATLFRDIPG 176
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Match: A0A197JQH7_9FUNG (Mitochondrial carrier n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JQH7_9FUNG) HSP 1 Score: 104 bits (260), Expect = 2.020e-22 Identity = 62/186 (33.33%), Postives = 94/186 (50.54%), Query Frame = 2 Query: 395 VAGTVGGISGALVSYPLDTVRVRMQTNG-NGRLLGPGRTASLLLKEAGVAGFYRGVLSPMVGTGLIKAAVFGGYGLCQGLVRRATGKESGELNLFHLGAAAMGSGLVGSFVVTPVERIKVVMQAALSSSXXXXXXXXXXXXXXXXXXXXXXYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPG 949 VAG++GG++ V P+DT++ R+Q G NGR +GP +K G G Y+G+ SP+VG + A +F Y + + G G L L +G A G+G+V + + +PVE +K+ MQA + Y+ CAR L+ EHG+R GL G T++RE+PG Sbjct: 17 VAGSLGGMAQVTVGQPMDTIKTRLQIEGPNGRFVGPMDCLRKTIKNEGFLGLYKGMASPLVGVAAVNALLFAAYSNFKKIQEPYPG---GPLTLTQIGIAGAGAGIVNAVLASPVELLKIKMQAQYGAGSTVR------------------YSGPVDCARQLIKEHGIRHGLMRGYWITVIREIPG 181
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Match: A0A830I1W1_9CHLO (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I1W1_9CHLO) HSP 1 Score: 105 bits (263), Expect = 2.600e-22 Identity = 64/189 (33.86%), Postives = 91/189 (48.15%), Query Frame = 2 Query: 389 HLVAGTVGGISGALVSYPLDTVRVRMQTNGNGRLLGPGRTASLLLKEAGVAGFYRGVLSPMVGTGLIKAAVFGGYGLCQGLVRRATGKESGE---LNLFHLGAAAMGSGLVGSFVVTPVERIKVVMQAALSSSXXXXXXXXXXXXXXXXXXXXXXYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVP 946 H V GT+GG+ G VSYP DTV+VRMQT ++G + + K G+A FYRGV++P+ G+IKA FG YG C + G E + + A +G +FV+ P + IK+ MQA Y N+W CA+ L+ E G+ L+ G G T+ R+ P Sbjct: 102 HFVGGTLGGMCGVAVSYPFDTVKVRMQTGAFNSMVG---AFTHVAKNEGMASFYRGVMAPLSAYGIIKAITFGTYGNCLDIFAGQKGTSMAEGYKPSYTEIALAGFAAGFTSTFVMAPSDSIKIAMQAGSIGGGTQ-------------------YKNSWECAKHLIKERGVAE-LFRGTGATMARDAP 267
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Match: A0A1X2HFQ1_SYNRA (Mitochondrial carrier n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HFQ1_SYNRA) HSP 1 Score: 102 bits (254), Expect = 1.220e-21 Identity = 59/192 (30.73%), Postives = 97/192 (50.52%), Query Frame = 2 Query: 374 PSTLEHLVAGTVGGISGALVSYPLDTVRVRMQTNGNGRLLGPGRTASLLLKEAGVAGFYRGVLSPMVGTGLIKAAVFGGYGLCQGLVRRATGKESGE-LNLFHLGAAAMGSGLVGSFVVTPVERIKVVMQAALSSSXXXXXXXXXXXXXXXXXXXXXXYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVP 946 PS VAG + G++ LV P+DT++VR+Q + R G A+ +K+ GV Y+G+ SP++G G + A +F Y C ++A GE L+L + A G+G+V S + +PVE +K+ +QA ++ GCA+ L+ + G+ GL+ G+ T+LRE+P Sbjct: 6 PSAAADFVAGNISGMANVLVGQPIDTIKVRLQLDTANRFRGGWDCAAQTIKQEGVLALYKGMASPLIGIGAVNALLFAAYSAC----KKAMQTHPGEVLSLPQIAVAGAGAGIVNSILASPVELLKIRLQAQYGKGGE--------------------FSGPIGCAKYLIRKDGIAHGLFRGMYATVLREIP 173
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Match: A0A261Y0R6_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y0R6_9FUNG) HSP 1 Score: 99.0 bits (245), Expect = 2.740e-20 Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 2 Query: 395 VAGTVGGISGALVSYPLDTVRVRMQTNGNGRLLGPGRTASLLLKEAGVAGFYRGVLSPMVGTGLIKAAVFGGYGLCQGLVRRATGKESGELNLFHLGAAAMGSGLVGSFVVTPVERIKVVMQAALSSSXXXXXXXXXXXXXXXXXXXXXXYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVP 946 +AG VGG++ LV PLDT++VR+QT+ GR G +K G Y+G+LSP++G G + A +F + L++R G + L++ + A G+G+V S + +PVE +K+ MQ+ S Y + CA L+ HG GL GL T++RE+P Sbjct: 17 LAGNVGGMAQVLVGQPLDTIKVRLQTDSVGRFNGAWDCCVKTVKNEGFLALYKGMLSPLIGIGAVNALLFAANSEFRQLLQR--GDPTRVLSIPEIAIAGAGAGIVNSVLASPVEMLKIKMQSQFGKSGDGKTPY---------------YRGPFDCANQLIKAHGFSNGLMRGLWATIVREIP 183
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Match: A0A8H7Q6C6_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q6C6_9FUNG) HSP 1 Score: 98.2 bits (243), Expect = 6.930e-20 Identity = 59/190 (31.05%), Postives = 96/190 (50.53%), Query Frame = 2 Query: 377 STLEHLVAGTVGGISGALVSYPLDTVRVRMQTNGNGRLLGPGRTASLLLKEAGVAGFYRGVLSPMVGTGLIKAAVFGGYGLCQGLVRRATGKESGELNLFHLGAAAMGSGLVGSFVVTPVERIKVVMQAALSSSXXXXXXXXXXXXXXXXXXXXXXYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVP 946 S +AG +GG+ LV PLDT++VR+Q + +GR G A +K G Y+G+ SP+VG G + A +F C+ L++ G++ L L+ + A G+G+V S + +PVE +K+ +QA Y+ CA+ L+ +HG+ GL+ GL T++RE+P Sbjct: 16 SAAADFIAGNMGGMCQVLVGQPLDTIKVRLQLD-SGRFNGAMDCAVQTIKNEGFFALYKGMASPLVGIGAVNALLFAANTECRRLLQSYPGEQ---LPLYKIAIAGSGAGIVNSVLASPVEMLKIKLQAQFGKGASGSGQRY--------------YSGPIDCAQDLIRQHGVANGLFRGLWATVVREIP 187
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Match: A0A7S2I5E1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2I5E1_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 2.280e-19 Identity = 69/198 (34.85%), Postives = 100/198 (50.51%), Query Frame = 2 Query: 356 VPASRLPSTLEHLVAGTVGGISGALVSYPLDTVRVRMQTNGNGRLLGPGRTASLLLKEAGVAGFYRGVLSPMVGTGLIKAAVFGGYGLCQG-LVRRATGKESGELNLFHLGAAAMGSGLVGSFVVTPVERIKVVMQAALSSSXXXXXXXXXXXXXXXXXXXXXXYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVP 946 V +P+T+ LVAG +GG G V+YPLDT++ + Q++ + L + + + GVAGFY G S MVG +IK A+F YG + L+R A G L+ L AA SG + SFV+TPVER+K VMQA + + + N C +V G+ + GLG T++RE+P Sbjct: 50 VSGDAVPATVS-LVAGMLGGAIGVGVAYPLDTLKTKQQSSAGIQNLNAIQLTREIYRTEGVAGFYSGCSSTMVGQAIIKGALFFIYGTARNTLIRTALG-----LSTLTLCLAAAISGAISSFVMTPVERVKCVMQAKAAGT----------------------FPNPIACVSEVVRRDGIFGLCFRGLGATVMREIP 219 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1697.4672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1697.4672.1 >prot_L-elsbetiae_contig1697.4672.1 ID=prot_L-elsbetiae_contig1697.4672.1|Name=mRNA_L-elsbetiae_contig1697.4672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp MPKLPQMQLHRKRRRRRRRRVVPSLVAAAVLALALLAQKTAAAAAQTEDSback to top mRNA from alignment at L-elsbetiae_contig1697:4937..14525- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1697.4672.1 ID=mRNA_L-elsbetiae_contig1697.4672.1|Name=mRNA_L-elsbetiae_contig1697.4672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9589bp|location=Sequence derived from alignment at L-elsbetiae_contig1697:4937..14525- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1697:4937..14525- >mRNA_L-elsbetiae_contig1697.4672.1 ID=mRNA_L-elsbetiae_contig1697.4672.1|Name=mRNA_L-elsbetiae_contig1697.4672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1764bp|location=Sequence derived from alignment at L-elsbetiae_contig1697:4937..14525- (Laminarionema elsbetiae ELsaHSoW15)back to top |