mRNA_L-elsbetiae_contig16969.4671.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16969.4671.1
Unique NamemRNA_L-elsbetiae_contig16969.4671.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: D8LDR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR8_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 5.690e-116
Identity = 253/562 (45.02%), Postives = 313/562 (55.69%), Query Frame = 1
Query:    1 VAEELLNFLDTHLLAHDPGTASSSSKVLVDQRSRG-------YAIEMHHPALGGWSPLSTATPSETIPKNCRVHVSVNEKLKATPPQ--QQGSMAPS-------------------------------PGASGGFTGAPPSLPPEQAS-EETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETP------------------------APVRVLELGCGTGLAGLAAAFSFGRRESGDN-DSESQAALPCPPRPSNTC----GGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERLTAGWPSCSGG-------------DGRQQENRQEGPAVPSAPSIAAQGLGLAGESVATAHADGFAQKCPGAVVASPPRASPRPQRPKGGQRVLLAYQWRSQRTGNALLEELEKAFHVWEIQPE 1437
            VA++LL+FL  H  A  P  ++ ++     +R+ G       Y++E+H PA GGW+PLS +T SETIP+NCRV V++  K +AT  +  Q  +  PS                               PGA+    G P  LP +++S +     EMLALPWRRFD+DLGG   EG +ICG R+ I DVSNSSEGTGLFTWDG+VLLAKYLEH AVAMRRDF  Q+    T+P+    EGA   S V  A G   +                               AP+RVLELGCGTGLAGLAAAF+FGRR SG + D  S+   P PP P        G +++G+ +  S P  V     VVLTDLEYAL NARAN   N+SSL+AVG+ V+++ELDWCRP   E    ++FDLILAADVVWLD+LV PLVRTLERLTAGWP   GG             +G Q+E R E               GLA    A+  +    Q+C     A+  R+  RP RP  G+RVLLAYQWRS+RTG ALLEEL   F V EI  E
Sbjct:   52 VAQDLLSFLQKHFRA--PAGSTPTTTAPAGERASGDQQDVDLYSVEVHDPARGGWTPLSVSTSSETIPRNCRVRVNIFAKPQATTTRCRQTTTEDPSSSSDGNSCKNLSASLPSGPARRNATFDGTAVPGAATTVDGTP--LPEDESSLDPVAPGEMLALPWRRFDKDLGGEGEEGLKICGNRVAIRDVSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFCEQQPCHSTQPSYRHPEGAGHGSSVTVAAGDSADVXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAPIRVLELGCGTGLAGLAAAFAFGRRHSGTSGDDNSEVNHPPPPSPCRRRNPLEGENDEGVAQCASPPAQVA----VVLTDLEYALTNARANTFLNSSSLEAVGAEVSSIELDWCRPLPRELSDKEAFDLILAADVVWLDDLVTPLVRTLERLTAGWPG--GGVDAWSAPLPPAPANGTQEERRNE--------------TGLA----ASFGSGASPQECELGGCAA--RSGGRP-RPPAGRRVLLAYQWRSERTGRALLEELGACFCVREIPAE 582          
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A6H5LL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL33_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.490e-59
Identity = 141/312 (45.19%), Postives = 177/312 (56.73%), Query Frame = 1
Query:    1 VAEELLNFLDTHLLAHDPGTASSSSKVLVDQRSRG-------YAIEMHHPALGGWSPLSTATPSETIPKNCRVHVSVNEKLKATPPQQQGSMAPSPGASGG-------------------------FTGAPPS-----LPPEQAS-EETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGV-------INATGGK------TNSLSKETP----------APVRVLELGCGTGLAGLAAAFSFGRRESG 753
            VA++LL+FL TH+ A    T ++++     +R+ G       Y++E+H PA GGW+ LS +TPSETIP+NCRV V+V  K +AT  + + +    P +S G                          TGA  +     LP +++S +     EMLALPWRRFD+DL G   EG QICGRR+ I DVSNSSEGTGLFTWDG+VLLAKYLEH AVAMRRDF  Q+    T+P+    EGA   S V       +N   G       TNS                AP+RVLELG GTGLAGLAAAF+FGRR SG
Sbjct:   92 VAQDLLSFLQTHVQAAAGSTPTTAAPAC--ERASGDQQDVDLYSVEVHDPARGGWTSLSVSTPSETIPRNCRVRVNVFAKPQATATRCRRTATKDPSSSDGNSSKNLSASLASGQARRNPPFDGTAVTGASTTVDGIPLPEDESSLDSVAPGEMLALPWRRFDKDLRGEGEEGLQICGRRVAIRDVSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFREQQPCLSTQPSCLHPEGAGDGSSVTVVDSADVNINNGSCSGCRSTNSXXXXXXXXXXXXXXRTAPIRVLELGSGTGLAGLAAAFAFGRRHSG 401          
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A6H5L4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A1_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 2.980e-30
Identity = 83/164 (50.61%), Postives = 94/164 (57.32%), Query Frame = 1
Query:  979 MELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERLTAGWPSC-----------SGGDGRQQENRQEGPAVPSAPSIAAQGLGLAGESVATAHADGFAQKCPGAVVASPPRASPRPQRPKGGQRVLLAYQWRSQRTGNALLEELEKAFHVWEIQPE 1437
            MELDWCRP   E    ++FDLILAADVVWLD+LV PLVRTLERLTAGWPS            +  +G Q+E R E               GLA    A   +    QKC G   A+  R+  R  RP  G+RVLLAYQWRS+RTG ALLEEL   F V EI PE
Sbjct:    1 MELDWCRPLPRELSDKEAFDLILAADVVWLDDLVTPLVRTLERLTAGWPSGGVDASPAPLSPAAANGTQEEQRNE--------------TGLA----ARFGSGAVPQKCEGGGRAA--RSVGR-SRPSAGRRVLLAYQWRSERTGRALLEELGACFRVREIPPE 143          
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A8K1CNV0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNV0_PYTOL)

HSP 1 Score: 110 bits (274), Expect = 3.300e-23
Identity = 87/265 (32.83%), Postives = 115/265 (43.40%), Query Frame = 1
Query:  316 QASEETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110
            Q ++ +     LALP R F  D   G    FQI G  +++G+V NS  GTGL TWDGS++LAKYLEH                        F   + H        GK            RVLE+G GTGL G++A                                   G +             +V+LTDL Y +DN   NV       + + + V  +ELDW +P +D    GD FDLILA+DVVW++ELV PLV+TL+ L
Sbjct:   90 QNTQSSPDDTCLALPSRLFPVDTTQGE---FQINGHAVLVGEVENSGLGTGLTTWDGSIVLAKYLEHR-----------------------FGNGQLH--------GK------------RVLEVGAGTGLVGISAGLL--------------------------------GAE-------------QVLLTDLAYTMDNLARNVELTGQHAQQIKARVQPVELDWFQPRSDL---GD-FDLILASDVVWVEELVRPLVQTLQTL 259          
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A6A3FDN6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FDN6_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.670e-22
Identity = 88/268 (32.84%), Postives = 116/268 (43.28%), Query Frame = 1
Query:  319 ASEETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRN----ASSLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110
            ASE   G   LALP R F  D+    G+ F I GR + IG+V NS +GTGL TWDGSV+LAKYLEH     RRD                         ++ +                RV+ELG GTGL G++AA    R                                             +V+LTDL+Y +DN   NV       A++ + + + V+   LDW  PP D    GD  D +LA+DVVW++EL+ PLV T + L
Sbjct:  103 ASELFPGHTCLALPSRIFGFDVA--EGDRFAIDGRVVHIGEVGNSGKGTGLTTWDGSVVLAKYLEHQR---RRD-------------------------IVGS----------------RVVELGAGTGLVGISAALLGAR---------------------------------------------QVILTDLDYVVDNLAKNVAETMKLAATAGRPIDTEVSTRVLDWFNPPTDL---GD-IDFVLASDVVWVEELIPPLVATFDTL 275          
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A662YK58_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YK58_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.760e-22
Identity = 88/260 (33.85%), Postives = 111/260 (42.69%), Query Frame = 1
Query:  343 EMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTV----NAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110
            E LALP R F  D+   +GE F I G+ +VIG+V NS +GTGL TWDGSV+LAKYLEH     RRD                                          A  RV+ELG GTGL G++AA    R                                             EV+LTDL+Y +DN   NV +    L   G  V    +   LDW  PP D  +G  + D +LA+DVVW++EL+ PLV T + L
Sbjct:  136 ECLALPSRIFGLDIE--AGERFAIDGKAVVIGEVGNSGQGTGLTTWDGSVVLAKYLEHQR---RRDI-----------------------------------------AGSRVVELGSGTGLVGISAALLGAR---------------------------------------------EVILTDLDYVVDNLAKNVAQTLQLLANEGGKVECKVSTQILDWFSPPDD--LG--NIDFLLASDVVWVEELIPPLVTTFDVL 300          
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A0P1AN60_PLAHL (Putative N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN60_PLAHL)

HSP 1 Score: 106 bits (265), Expect = 8.260e-22
Identity = 81/258 (31.40%), Postives = 104/258 (40.31%), Query Frame = 1
Query:  349 LALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNA----MELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110
            LALP R F  D+     + F+I GR + IG++ NS +GTGL TWDGSV+LAKYLEH     RRD                                          A  RV+ELG GTGL G+AAA    +                                             +V+L+DL Y +DN   NV        AVG  +       ELDW  PP D        D +LA+DVVW++ L+ PLV+T + L
Sbjct:  115 LALPSRSFGSDVS--VSDYFKIDGRMVHIGEIGNSGKGTGLITWDGSVVLAKYLEHER---RRDI-----------------------------------------AGSRVVELGAGTGLVGIAAALLGAK---------------------------------------------QVILSDLSYVIDNLAKNVAETKKLADAVGKPIQCDILTQELDWFNPPTDL----KDIDFVLASDVVWIESLIPPLVKTFDTL 277          
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A2D4BQT1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQT1_PYTIN)

HSP 1 Score: 104 bits (260), Expect = 9.570e-22
Identity = 85/258 (32.95%), Postives = 108/258 (41.86%), Query Frame = 1
Query:  349 LALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNAS----SLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110
            LALP R FD D   G   GF+I  R +V+G+V NS  GTGL TWDGSV+LAKYLEH   A  +                                GK            RVLE+G GTGL G++AA                                                  +VVLTDLEY + N + N++   +    S K V + ++A  LDW  P  D        DLILA+DVVW+ +L+ PLV TL +L
Sbjct:   40 LALPARLFDVDTLSG---GFKIKDRAVVVGEVENSGLGTGLTTWDGSVVLAKYLEHKYSAFMQ--------------------------------GK------------RVLEVGAGTGLVGISAALLG---------------------------------------------ATDVVLTDLEYVVANLQKNINMTLAAAEASAKPVDARISAQVLDWFNPRTDF----GRVDLILASDVVWVKDLIPPLVNTLRQL 201          
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: G5A2H2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A2H2_PHYSP)

HSP 1 Score: 105 bits (263), Expect = 1.460e-21
Identity = 87/268 (32.46%), Postives = 112/268 (41.79%), Query Frame = 1
Query:  319 ASEETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRN----ASSLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110
            A E   G   LALP R F  D+    G+ F I GR + IG+V NS +GTGL TWDGSV+LA+YLEH                                G I               A  R++ELG GTGL G++AA    R                                             +V+LTDL+Y +DN   NV       A++ K V S ++   LDW  PP D    GD  D +LA+DVVW++EL+ PLV T + L
Sbjct:  103 ADELFPGHTCLALPSRIFGLDVA--EGDQFAIDGRVVHIGEVGNSGKGTGLTTWDGSVVLARYLEHQ-----------------------------RRGDI---------------AGSRIVELGAGTGLVGISAALLGAR---------------------------------------------QVILTDLDYVVDNLAKNVAETMKLAANAGKPVDSDISTRVLDWFNPPTDL---GD-IDFLLASDVVWVEELIPPLVATFDTL 275          
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: W7T984_9STRA (Nicotinamide N-methyltransferase, putative n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T984_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.900e-21
Identity = 111/387 (28.68%), Postives = 150/387 (38.76%), Query Frame = 1
Query:  319 ASEETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNASSLKA-------VG---STVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERLTAGWPSCSGGDGRQQENRQEGPAV--PSAPSIAAQGL---GLAGESVATAHADGFAQKCPGAVVASPPRASPRPQRPKGGQRVLLAYQWRSQRTGNALLEELEKAFHVWEIQP 1434
            +S  +    +LALP RRF  DL    GEG  +   R+ +  V+NS  GTGL TWDG+V+L+KYL                              + H+     +   T     E     +V+ELG GTGL GL+ A    R                                             EV+LTDL YAL+N   NV RN  + +        VG     V   E DW +PPA   V G   D+++AADVVWLDELV PL R L  +  G     G  G ++    E   V  PSA  +   GL   G  G   A +  +G                +P+ ++        +AYQ RS +T   L+  + +   V E  P
Sbjct:  141 SSSSSPDKPVLALPGRRFPLDL---DGEGIPVLDTRIFVKGVANSGLGTGLTTWDGAVVLSKYL-----------------------------IKQHTHATARSQAPTFDFEFEFLKGKKVVELGAGTGLVGLSCAVLGAR---------------------------------------------EVILTDLPYALENLNDNVRRNVGAWRGLVQGPPGVGREEGRVAVEEGDWLQPPASSLVEG--VDVVVAADVVWLDELVPPLGRYLATILMGGGREGGKGGERKRQISESSPVGGPSA-GMVVPGLERPGKGGNETAESGEEGSGXXXXXXXXXXXXXGNPKSRKEWNFPVCFMAYQSRSAQTDALLMATMRQEGLVVEEVP 447          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDR8_ECTSI5.690e-11645.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LL33_9PHAE1.490e-5945.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4A1_9PHAE2.980e-3050.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1CNV0_PYTOL3.300e-2332.83Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3FDN6_9STRA1.670e-2232.84Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A662YK58_9STRA1.760e-2233.85Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A0P1AN60_PLAHL8.260e-2231.40Putative N2,N2-dimethylguanosine tRNA methyltransf... [more]
A0A2D4BQT1_PYTIN9.570e-2232.95Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
G5A2H2_PHYSP1.460e-2132.46Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
W7T984_9STRA1.900e-2128.68Nicotinamide N-methyltransferase, putative n=2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16969contigL-elsbetiae_contig16969:126..2882 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.5
Seed ortholog evalue6.6e-23
Seed eggNOG ortholog42099.EPrPV00000020168
Preferred nameVCPKMT
KEGG koko:K21804,ko:K21806
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019538,GO:0019899,GO:0032259,GO:0032780,GO:0032991,GO:0036211,GO:0043086,GO:0043170,GO:0043412,GO:0043414,GO:0043462,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051117,GO:0051336,GO:0051346,GO:0065007,GO:0065009,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.Rapid response to glucose protein. Source PGD
EggNOG OGs1ME1N@121069,KOG2793@1,KOG2793@2759
COG Functional cat.A
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03019,ko03110
Exons4
Model size1437
Cds size1437
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16969.4671.1prot_L-elsbetiae_contig16969.4671.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16969 126..2882 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815705.4468818-CDS-L-elsbetiae_contig16969:125..5411622815705.4468818-CDS-L-elsbetiae_contig16969:125..541Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16969 126..541 -
1691683049.2225726-CDS-L-elsbetiae_contig16969:125..5411691683049.2225726-CDS-L-elsbetiae_contig16969:125..541Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16969 126..541 -
1622815705.4612098-CDS-L-elsbetiae_contig16969:1122..16631622815705.4612098-CDS-L-elsbetiae_contig16969:1122..1663Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16969 1123..1663 -
1691683049.2324045-CDS-L-elsbetiae_contig16969:1122..16631691683049.2324045-CDS-L-elsbetiae_contig16969:1122..1663Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16969 1123..1663 -
1622815705.4722493-CDS-L-elsbetiae_contig16969:2088..24291622815705.4722493-CDS-L-elsbetiae_contig16969:2088..2429Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16969 2089..2429 -
1691683049.2406726-CDS-L-elsbetiae_contig16969:2088..24291691683049.2406726-CDS-L-elsbetiae_contig16969:2088..2429Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16969 2089..2429 -
1622815705.4856563-CDS-L-elsbetiae_contig16969:2743..28821622815705.4856563-CDS-L-elsbetiae_contig16969:2743..2882Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16969 2744..2882 -
1691683049.2495704-CDS-L-elsbetiae_contig16969:2743..28821691683049.2495704-CDS-L-elsbetiae_contig16969:2743..2882Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16969 2744..2882 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16969.4671.1

>prot_L-elsbetiae_contig16969.4671.1 ID=prot_L-elsbetiae_contig16969.4671.1|Name=mRNA_L-elsbetiae_contig16969.4671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=479bp
VAEELLNFLDTHLLAHDPGTASSSSKVLVDQRSRGYAIEMHHPALGGWSP
LSTATPSETIPKNCRVHVSVNEKLKATPPQQQGSMAPSPGASGGFTGAPP
SLPPEQASEETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSN
SSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGA
ESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRES
GDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLE
YALDNARANVHRNASSLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILA
ADVVWLDELVEPLVRTLERLTAGWPSCSGGDGRQQENRQEGPAVPSAPSI
AAQGLGLAGESVATAHADGFAQKCPGAVVASPPRASPRPQRPKGGQRVLL
AYQWRSQRTGNALLEELEKAFHVWEIQPE
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mRNA from alignment at L-elsbetiae_contig16969:126..2882-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16969.4671.1 ID=mRNA_L-elsbetiae_contig16969.4671.1|Name=mRNA_L-elsbetiae_contig16969.4671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2757bp|location=Sequence derived from alignment at L-elsbetiae_contig16969:126..2882- (Laminarionema elsbetiae ELsaHSoW15)
GTTGCCGAGGAACTGCTGAATTTCCTCGACACCCACCTTCTTGCCCATGA CCCGGGGACAGCGAGTTCTTCTTCGAAGGTATTGGTGGACCAGCGCTCTC GCGGCTACGCTATTGAGATGCACCACCCTGCGCTAGGAGGTAAGTCTACT GCTGTGAAGCCCTGGTGTGTTCTGATGGGTGTCGAGTATGACCGTCACTT GCGTGCTACCGTAATTACGTTGGAGGAGATATTACCTTTGGCGAGGGTTA CATGTTCATCTGCAGGCAGTGTGCAGTTTGGTTTCGTCCTTCATAACGTA GGAAAAGTACGAGTGCACTGTACCGTAAGGTGTTTGCTCGATGCATTGGT CCGCACTGCCCAAGGAAAGGAGCTTCTACTTATGAGTAAACCAACCCCAA CCGTGACATTTCTGATACGAAACCCGCTCTGATGTTGGCGTAAACGCCCA CAGGGTGGAGCCCCCTGTCAACGGCAACCCCATCGGAGACCATTCCAAAG AACTGCAGAGTCCACGTCAGCGTCAACGAGAAACTCAAGGCGACACCTCC TCAGCAACAGGGGAGCATGGCGCCTTCTCCGGGCGCAAGCGGCGGGTTCA CGGGGGCGCCACCGTCTCTCCCTCCCGAGCAAGCAAGCGAAGAGACGGAC GGCGCGGAGATGCTAGCGCTCCCGTGGAGACGGTTTGACCAAGACCTGGG GGGAGGAAGCGGAGAGGGATTTCAGATCTGCGGGAGGCGGATGGTGATCG GAGATGTTTCCAACTCTAGCGAGGGGACCGGACTGTTCACATGGGTGAGC GCGAGAGAGGGAGAGGAGTGAGAGAGGGAGCCTCCGTTCCTATGCAATGT GCTCTCTTGGACGAGGGACGGACGCGTGTACTCACGTTTACAGGCCCTAC GGCCCTACCGTACATGTAAGACCCGTGCGCTGTGGTCGTATATACAATGC GAGACTCTCACCCAGCAGCGTGCAGATGTATCCCACGCGAAACTGCGATT TTGTGGGTGCATTCGCAAAGGGGCGACAATCTTGTCTTTTTCTATGTACG ATGTAGCGTGCGTTCATCTGTCCCAACCTACCCTCGGCGGCGAAGCTGCA TCTCGATGATATGTACTGGAAGAACAGTAGCATGGAAGCTGCGAATTGAT GCAAAATCCAACAGAGGCGCCTTTCATGCCGCCCCGGCCCTTCGTTCTCT ATTTCGCACCTCGTGCCAGGATGGCTCCGTGTTGCTTGCGAAATACCTCG AGCACCACGCCGTTGCAATGCGGCGAGACTTCGACAATCAGCGGTCTCGG CGCCAAACCCGCCCGACGCCCACTACATTTGAGGGCGCCGAAAGTCATAG TGGCGTCATCAATGCTACAGGTGGTAAAACCAACAGCCTTAGCAAGGAAA CACCTGCACCTGTTCGCGTCTTAGAGCTTGGCTGCGGTACGGGTCTCGCA GGCCTTGCGGCGGCGTTTTCGTTTGGAAGACGAGAGAGTGGAGACAACGA CAGCGAAAGCCAGGCCGCTTTGCCGTGCCCTCCTCGACCCAGCAACACTT GTGGAGGAGATGAAAAGGGGTTAGATAGATACCCTTCGTCTCCGACAGCA GTGGAAGACGGTGTAGAGGTCGTGTTGACGGATCTTGAGTACGCACTGGA CAACGCTCGAGCAAACGTTCATCGCAATGCGTCATCGCTCAAAGCCGTCG GCAGCACGGTGAACGCGATGGAGCTCGACTGGTGCCGTCCGCCGGCGGAC GAGTTCGTCGGTGAGGCAGTAACTCTATCGCTTATAGATTCCGGCTAGTG ACAAGAGCGATACATCCCAGCCTACGCAGAAAAAGGGCACCTGGCGAAAA TTCATGGGGATAGAGAGCAACCCAGAAGTATGAGGGGCGGAATACGCTTG TCGAAATGGAATGTAACGGTCTTCGCGCTCGTGTGTCGGTGAGTCATTTC CCCCGAAGCGCACGGCGACATTTACTTGTGGGGTTTAGGGACTCCAAGGC ATCGCCCTTTCGGCGAAGTGTGCTTTGTATCTCGTTGGCTTTTCTGTTTT GCGCATTTGAGGCAAGGAGATGACGAAGGTTGTTGCCACTCCCAAATCGA GCACGGCCGTAGCAGCTCTTCATGAACGAAAAATGGTTAAGCAGTAGGAA GGAGTGGCGCGTATGTGGAAGACGCCACTTTGCGCGCAGCCCTCTCAATG ATGACCGATTTTACTATATTTTGGGAAAAATCGCACTCGAATGCTGACGT TGGACACCCTGACTGGACGCTTGAAGTTTGTTCCACAAGTGCCGCTCTCC AACACGTCCAAACCCTCTCCCCCCGTTCGTCGGCTGTGCAGGCGGCGACT CGTTCGACCTAATCCTGGCCGCCGATGTGGTCTGGTTGGATGAGCTAGTC GAGCCTCTTGTGCGCACGCTCGAGCGCCTCACCGCAGGCTGGCCTTCATG CAGTGGGGGTGACGGAAGACAACAAGAGAATCGGCAAGAGGGACCGGCTG TGCCGTCAGCGCCATCCATAGCAGCCCAGGGGCTAGGGTTGGCCGGAGAG AGTGTGGCCACCGCGCACGCGGACGGCTTCGCGCAGAAATGTCCAGGTGC TGTTGTCGCAAGTCCACCACGGGCTTCGCCTCGGCCTCAGAGGCCGAAAG GCGGGCAGCGCGTATTGTTGGCGTACCAGTGGAGGAGCCAACGAACGGGG AACGCATTGCTGGAGGAGCTCGAGAAGGCTTTTCATGTCTGGGAGATCCA GCCGGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16969:126..2882-

>mRNA_L-elsbetiae_contig16969.4671.1 ID=mRNA_L-elsbetiae_contig16969.4671.1|Name=mRNA_L-elsbetiae_contig16969.4671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2874bp|location=Sequence derived from alignment at L-elsbetiae_contig16969:126..2882- (Laminarionema elsbetiae ELsaHSoW15)
GTTGCCGAGGAACTGCTGAATTTCCTCGACACCCACCTTCTTGCCCATGA
CCCGGGGACAGCGAGTTCTTCTTCGAAGGTATTGGTGGACCAGCGCTCTC
GCGGCTACGCTATTGAGATGCACCACCCTGCGCTAGGAGGTTGCCGAGGA
ACTGCTGAATTTCCTCGACACCCACCTTCTTGCCCATGACCCGGGGACAG
CGAGTTCTTCTTCGAAGGTATTGGTGGACCAGCGCTCTCGCGGCTACGCT
ATTGAGATGCACCACCCTGCGCTAGGAGGGTGGAGCCCCCTGTCAACGGC
AACCCCATCGGAGACCATTCCAAAGAACTGCAGAGTCCACGTCAGCGTCA
ACGAGAAACTCAAGGCGACACCTCCTCAGCAACAGGGGAGCATGGCGCCT
TCTCCGGGCGCAAGCGGCGGGTTCACGGGGGCGCCACCGTCTCTCCCTCC
CGAGCAAGCAAGCGAAGAGACGGACGGCGCGGAGATGCTAGCGCTCCCGT
GGAGACGGTTTGACCAAGACCTGGGGGGAGGAAGCGGAGAGGGATTTCAG
ATCTGCGGGAGGCGGATGGTGATCGGAGATGTTTCCAACTCTAGCGAGGG
GACCGGACTGTTCACATGGGGTGGAGCCCCCTGTCAACGGCAACCCCATC
GGAGACCATTCCAAAGAACTGCAGAGTCCACGTCAGCGTCAACGAGAAAC
TCAAGGCGACACCTCCTCAGCAACAGGGGAGCATGGCGCCTTCTCCGGGC
GCAAGCGGCGGGTTCACGGGGGCGCCACCGTCTCTCCCTCCCGAGCAAGC
AAGCGAAGAGACGGACGGCGCGGAGATGCTAGCGCTCCCGTGGAGACGGT
TTGACCAAGACCTGGGGGGAGGAAGCGGAGAGGGATTTCAGATCTGCGGG
AGGCGGATGGTGATCGGAGATGTTTCCAACTCTAGCGAGGGGACCGGACT
GTTCACATGGGATGGCTCCGTGTTGCTTGCGAAATACCTCGAGCACCACG
CCGTTGCAATGCGGCGAGACTTCGACAATCAGCGGTCTCGGCGCCAAACC
CGCCCGACGCCCACTACATTTGAGGGCGCCGAAAGTCATAGTGGCGTCAT
CAATGCTACAGGTGGTAAAACCAACAGCCTTAGCAAGGAAACACCTGCAC
CTGTTCGCGTCTTAGAGCTTGGCTGCGGTACGGGTCTCGCAGGCCTTGCG
GCGGCGTTTTCGTTTGGAAGACGAGAGAGTGGAGACAACGACAGCGAAAG
CCAGGCCGCTTTGCCGTGCCCTCCTCGACCCAGCAACACTTGTGGAGGAG
ATGAAAAGGGGTTAGATAGATACCCTTCGTCTCCGACAGCAGTGGAAGAC
GGTGTAGAGGTCGTGTTGACGGATCTTGAGTACGCACTGGACAACGCTCG
AGCAAACGTTCATCGCAATGCGTCATCGCTCAAAGCCGTCGGCAGCACGG
TGAACGCGATGGAGCTCGACTGGTGCCGTCCGCCGGCGGACGAGTTCGTC
GGATGGCTCCGTGTTGCTTGCGAAATACCTCGAGCACCACGCCGTTGCAA
TGCGGCGAGACTTCGACAATCAGCGGTCTCGGCGCCAAACCCGCCCGACG
CCCACTACATTTGAGGGCGCCGAAAGTCATAGTGGCGTCATCAATGCTAC
AGGTGGTAAAACCAACAGCCTTAGCAAGGAAACACCTGCACCTGTTCGCG
TCTTAGAGCTTGGCTGCGGTACGGGTCTCGCAGGCCTTGCGGCGGCGTTT
TCGTTTGGAAGACGAGAGAGTGGAGACAACGACAGCGAAAGCCAGGCCGC
TTTGCCGTGCCCTCCTCGACCCAGCAACACTTGTGGAGGAGATGAAAAGG
GGTTAGATAGATACCCTTCGTCTCCGACAGCAGTGGAAGACGGTGTAGAG
GTCGTGTTGACGGATCTTGAGTACGCACTGGACAACGCTCGAGCAAACGT
TCATCGCAATGCGTCATCGCTCAAAGCCGTCGGCAGCACGGTGAACGCGA
TGGAGCTCGACTGGTGCCGTCCGCCGGCGGACGAGTTCGTCGGCGGCGAC
TCGTTCGACCTAATCCTGGCCGCCGATGTGGTCTGGTTGGATGAGCTAGT
CGAGCCTCTTGTGCGCACGCTCGAGCGCCTCACCGCAGGCTGGCCTTCAT
GCAGTGGGGGTGACGGAAGACAACAAGAGAATCGGCAAGAGGGACCGGCT
GTGCCGTCAGCGCCATCCATAGCAGCCCAGGGGCTAGGGTTGGCCGGAGA
GAGTGTGGCCACCGCGCACGCGGACGGCTTCGCGCAGAAATGTCCAGGTG
CTGTTGTCGCAAGTCCACCACGGGCTTCGCCTCGGCCTCAGAGGCCGAAA
GGCGGGCAGCGCGTATTGTTGGCGTACCAGTGGAGGAGCCAACGAACGGG
GAACGCATTGCTGGAGGAGCTCGAGAAGGCTTTTCATGTCTGGGAGATCC
AGCCGGAGGCGGCGACTCGTTCGACCTAATCCTGGCCGCCGATGTGGTCT
GGTTGGATGAGCTAGTCGAGCCTCTTGTGCGCACGCTCGAGCGCCTCACC
GCAGGCTGGCCTTCATGCAGTGGGGGTGACGGAAGACAACAAGAGAATCG
GCAAGAGGGACCGGCTGTGCCGTCAGCGCCATCCATAGCAGCCCAGGGGC
TAGGGTTGGCCGGAGAGAGTGTGGCCACCGCGCACGCGGACGGCTTCGCG
CAGAAATGTCCAGGTGCTGTTGTCGCAAGTCCACCACGGGCTTCGCCTCG
GCCTCAGAGGCCGAAAGGCGGGCAGCGCGTATTGTTGGCGTACCAGTGGA
GGAGCCAACGAACGGGGAACGCATTGCTGGAGGAGCTCGAGAAGGCTTTT
CATGTCTGGGAGATCCAGCCGGAG
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