mRNA_L-elsbetiae_contig16958.4665.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Match: D7FV82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV82_ECTSI) HSP 1 Score: 136 bits (342), Expect = 1.500e-35 Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 1 Query: 1 MAVRVLDELDMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGERGLVSVGQQLRIVQRIQRSYKCLLPRR 231 MAVRVLDELD+GKLMMLVHQ+LRLIRSGPRRFPRRDLVNL EDLAELVGERGLVSVGQQL+IVQR+QRSYK LLPRR Sbjct: 691 MAVRVLDELDLGKLMMLVHQVLRLIRSGPRRFPRRDLVNLHEDLAELVGERGLVSVGQQLQIVQRVQRSYKFLLPRR 767
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Match: A0A7R9VRK5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VRK5_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 3.910e-12 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 28 DMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGERGLVSVGQQLRIVQRIQRSYKCL 219 D+G LM+L+H+ ++ RRF R +L N+ EDLAEL GERG VSV QQL+IV R+ R+Y L Sbjct: 83 DLGMLMLLIHECRTILSDNRRRFRRNELRNVSEDLAELAGERGAVSVQQQLQIVARMSRTYPFL 146
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Match: A0A835YHP7_9STRA (ATP synthase regulation protein NCA2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHP7_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.380e-11 Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = 1 Query: 7 VRVLDELDMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGERGLVSVGQQLRIV 189 ++ LDELD+GKL++L +Q+ RL+ RRF R +L NL EDL EL+G+RG+V+VGQQL I+ Sbjct: 711 LKTLDELDLGKLVLLAYQVRRLVGRHERRFRRDELHNLNEDLCELMGDRGIVTVGQQLSIL 771
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Match: A0A7S3QA01_9STRA (Hypothetical protein n=3 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QA01_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.140e-10 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 10 RVLDELDMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGERGLVSVGQQLRIVQRIQRSYKCL 219 ++L D+G LM+LVH+ ++ RRF R +L N EDLAEL GERG VSV QQL+I+ R+ R+Y L Sbjct: 860 QILSSDDLGMLMLLVHECRVILWQDRRRFTRSELRNASEDLAELAGERGAVSVRQQLQIIARMCRTYSFL 929
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Match: A0A7S4MTH1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTH1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.140e-10 Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 13 VLDELDMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGERGLVSVGQQLRIVQRIQRSYKCL 219 VL D+G LM+L+H+ ++ RRF R L ++ EDLAEL GERG VSV QQL+IV R+ R+Y L Sbjct: 378 VLSAEDLGMLMLLIHECRTILNENRRRFARSGLRSVSEDLAELAGERGAVSVQQQLQIVARMCRTYPFL 446
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Match: A0A7S2R429_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R429_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 6.880e-10 Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 13 VLDELDMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGERGLVSVGQQLRIVQRIQRSYKCLL 222 VL+ D+G LM+LVH ++ RRF +++L ++ EDLAEL GE+G VSV QQLRI+ R+ R+Y L+ Sbjct: 135 VLNSDDLGMLMLLVHGYRTILWRYRRRFSKKELSSISEDLAELTGEKGPVSVQQQLRIIGRMCRTYPFLM 204
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Match: A0A7S3L1P6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1P6_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 7.760e-10 Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 MAVRVLDELDMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGERGLVSVGQQLRIVQRIQRSYKCL 219 + V VL D+G +M+L+H+L ++ RRF R L + EDLAEL GERG VSV QQL+I+ R+ R+Y L Sbjct: 388 LGVCVLSSDDLGLIMLLIHELRTILMRESRRFTRDVLRGVSEDLAELAGERGAVSVRQQLQILTRMNRNYSFL 460
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Match: A0A6U3SXL5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SXL5_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.080e-9 Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 1 Query: 28 DMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGERGLVSVGQQLRIVQRIQRSYKCL 219 D+G +M+LVHQ ++++ RRF + + N+ EDLAEL GERG V+V QQL+I+ R+ R+Y L Sbjct: 542 DLGMVMLLVHQCRKILQEDGRRFSQSTIRNVSEDLAELAGERGAVTVRQQLQILSRMGRTYPFL 605
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Match: A0A7S4UYT7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UYT7_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.090e-9 Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 1 Query: 28 DMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGERGLVSVGQQLRIVQRIQRSYKCL 219 D+G +M+LVHQ ++++ RRF + + N+ EDLAEL GERG V+V QQL+I+ R+ R+Y L Sbjct: 741 DLGMVMLLVHQCRKILQEDGRRFSQSTIRNVSEDLAELAGERGAVTVRQQLQILSRMGRTYPFL 804
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Match: A0A7S2LEI8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LEI8_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.610e-9 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 7 VRVLDELDMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGERGLVSVGQQLRIVQRIQRSY 210 V +L+ D+G L++LVH+ LI RRF +++ N+ EDLAEL GERG VSV QQL IV R+ R Y Sbjct: 222 VVMLNTNDLGMLVLLVHECRTLILKNKRRFSDQEIRNVLEDLAELSGERGCVSVKQQLEIVSRMSRVY 289 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16958.4665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16958.4665.1 >prot_L-elsbetiae_contig16958.4665.1 ID=prot_L-elsbetiae_contig16958.4665.1|Name=mRNA_L-elsbetiae_contig16958.4665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp MAVRVLDELDMGKLMMLVHQLLRLIRSGPRRFPRRDLVNLQEDLAELVGEback to top mRNA from alignment at L-elsbetiae_contig16958:2710..2943- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16958.4665.1 ID=mRNA_L-elsbetiae_contig16958.4665.1|Name=mRNA_L-elsbetiae_contig16958.4665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=234bp|location=Sequence derived from alignment at L-elsbetiae_contig16958:2710..2943- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16958:2710..2943- >mRNA_L-elsbetiae_contig16958.4665.1 ID=mRNA_L-elsbetiae_contig16958.4665.1|Name=mRNA_L-elsbetiae_contig16958.4665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=468bp|location=Sequence derived from alignment at L-elsbetiae_contig16958:2710..2943- (Laminarionema elsbetiae ELsaHSoW15)back to top |