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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1349 |
| Cds size | 786 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815704.8061328-UTR-L-elsbetiae_contig16951:454..964 | 1622815704.8061328-UTR-L-elsbetiae_contig16951:454..964 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig16951 455..964 + |
| 1691683048.8724263-UTR-L-elsbetiae_contig16951:454..964 | 1691683048.8724263-UTR-L-elsbetiae_contig16951:454..964 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig16951 455..964 + |
| 1622815704.8501163-UTR-L-elsbetiae_contig16951:2782..2835 | 1622815704.8501163-UTR-L-elsbetiae_contig16951:2782..2835 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig16951 2783..2835 + |
| 1691683048.9039452-UTR-L-elsbetiae_contig16951:2782..2835 | 1691683048.9039452-UTR-L-elsbetiae_contig16951:2782..2835 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig16951 2783..2835 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815704.8221107-CDS-L-elsbetiae_contig16951:964..1357 | 1622815704.8221107-CDS-L-elsbetiae_contig16951:964..1357 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig16951 965..1357 + |
| 1691683048.8819711-CDS-L-elsbetiae_contig16951:964..1357 | 1691683048.8819711-CDS-L-elsbetiae_contig16951:964..1357 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig16951 965..1357 + |
| 1622815704.8362758-CDS-L-elsbetiae_contig16951:2389..2782 | 1622815704.8362758-CDS-L-elsbetiae_contig16951:2389..2782 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig16951 2390..2782 + |
| 1691683048.8950796-CDS-L-elsbetiae_contig16951:2389..2782 | 1691683048.8950796-CDS-L-elsbetiae_contig16951:2389..2782 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig16951 2390..2782 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16951.4664.1 >prot_L-elsbetiae_contig16951.4664.1 ID=prot_L-elsbetiae_contig16951.4664.1|Name=mRNA_L-elsbetiae_contig16951.4664.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=262bp
MPRRKPPDTESDQVDPVVDYEKEGSDNQNANEDEESSSDGESSDEDPSLA
ADGRAASPPRTPASDSRAVNASSDELLTPMSEEDLEALLYKEELQQHIVA
AREGRTPIPFSRSSLARADAAAAKRELALQTAHDEAQHKAANRPSTRVVV
ASSASRGNNNPNARTSGGSNTNARGNGGRNAYARGDGGGSSSTGTRGGGS
TNNTRARGGGNNNRNRDGERSSRGSGAGRYSHREDPDRDDCTYRRCESRR
SHDIHRCCCSP* back to topmRNA from alignment at L-elsbetiae_contig16951:455..2835+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig16951.4664.1 ID=mRNA_L-elsbetiae_contig16951.4664.1|Name=mRNA_L-elsbetiae_contig16951.4664.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2381bp|location=Sequence derived from alignment at L-elsbetiae_contig16951:455..2835+ (Laminarionema elsbetiae ELsaHSoW15)
GTCGATTTAGGTTTGATACGAAGAACGGACGGCAGCAAAGGCTCTACAGC
ACCGCTAAAGAAACGAAGGCCACGCGATGGTAGCTGTTGTCCTTAGCTTT
CGATAGATGCGTCAATACGTAGTGGCCATCATGGAGAATGTGCTTCATTT
TAAATTAATTGCGATGGCGCTTAGTGTAAATGCCACCTTGAATGACCAGT
TAGAGTGACGTCAACAGATGAGTCAGCCAAGATCGTATATATTGGCCGGG
GTATCACAGATCGAGTCAGTACCTATTCCTCCGCTTCCTGGGAACGTTCT
AGGAACGCGGGGAGTTCTTGCCTCTCAAAAGGCAACTGCTGGCTCTACAC
CCGAGCCCACTCGGTGTACCCTCTACACCAAACCCACGAGAAGAGAACCA
CGCCGGCAGAACCTAGAGAGGGCTCATCCCCCTCATAGTGGCGTCGACCT
CGATACAAAATACAGACGTTTGTTCTCGTACAGCTCGGTTGGACAACTTT
CAACCGAGTCATGCCAAGGCGTAAGCCCCCGGACACTGAGTCCGACCAAG
TAGATCCAGTGGTGGACTACGAAAAGGAGGGCAGCGACAACCAGAACGCA
AACGAAGACGAGGAGTCGTCTAGTGACGGGGAAAGCAGCGACGAAGACCC
GTCACTTGCTGCTGACGGCCGTGCTGCCAGCCCTCCCCGTACCCCCGCTT
CCGACAGCCGTGCTGTCAACGCGTCGTCCGATGAGCTGCTGACCCCGATG
TCTGAAGAAGATCTCGAAGCCCTCCTCTACAAGGAGGAGTTGCAGCAGCA
CATCGTGGCAGCACGAGAGGGTCGTACACCCATCCCCTTCAGCCGCAGCT
CGTTGGCGCGGGCGGATGCAGCAGCGGCCAAACGTGAACTTGCCCTCCAA
ACTGTAAGTGGAAAAAGAAAATTGAATCTCTCCGACGAAGATGTTGAAGT
CGTAACACAACAGGAATCGTTTCCTCTGTTGTCCTCAGTGCCGTCGCTGA
GTACACCCACCATCCCGTTTTCGCCTGTTAGCATTGGTGCGCCACCCACC
GTGTCGTCTGCGCCCCAATCTAACAGTAGCGCGTCCGTACAAGCTAGTGC
TACCAACGCAACACCGTGTGTTGCTGCAGCAGCAGTAGCTTCAACCTCGT
TGGTTGCAGTATCAACTTCCACTGTCGGAAGTGTGCCCCCCAGTGCAAGT
ACCGTAGCACCTGCACCGACTCGTTCGTACGTGAACACTGCCACCAACGT
GTCAATAAGCGCAGCTGACCTACGTAGCGTCACGCGTTTGACTGGTGACA
ATTCACAAGACGTACTTGAGACGTTGAGCCATTACAGAGTGATCGTAGGA
TTGAAAGCAGCAGCTGTCTCGTCCGACACTGTTTTTGCCGACAACACCGC
TCTGAAGCACGTTGCGCTTGTTGGATCAGGAGAGGTGTTAACTCTTATTC
AACAGATCCTCTCAGGACAGATCAACTGCGAAAATGCCGCAGATACCCCT
GACCCAGAGACCCCTGACTACCACCCTCCCCCCCGTACTTGGCAAGAAAT
GGTCAACACGTTGTTGCACTTCCTTCTCTCCGCAAATTCCATCGAGGAAG
GAGCCGCCAATATTGCTGGTATTCAGCAAGGGCCCAATGAGTCTGCAGCG
TCCGGACTCCGTTACCGGACCATACTGTCTCGTTTCATGGCAGCCGTCGA
ACGTGCACCGGGGAGTCGTACCCCGTGGAATTGTATGTCCGCGGAGTTGT
GGCAAATTGGTCTTTACCCGACCCTCCGCCTCATGCAATTGCAAAACAAA
GCACCCGCATCGTTGCGGGAAGCTGAGGAACGTGCTCGCCGTAACGAAGC
CGTCCAGCAAACGGGAGCTACTGTCAGTTCATTAAGTGGTACTCCCCCCG
CGTCACACCGTCCCGTTTCCCAACCCGTGATGCAGGCCCATGATGAGGCA
CAGCACAAGGCTGCCAACCGCCCCTCCACTCGTGTCGTGGTGGCGTCCAG
CGCGAGCAGAGGAAACAACAACCCTAACGCTCGCACGTCTGGCGGTAGCA
ACACCAACGCCCGTGGCAATGGTGGCCGCAACGCCTACGCCCGTGGCGAT
GGAGGCGGCAGCAGCAGCACCGGCACCCGTGGTGGCGGTAGCACCAACAA
CACCCGCGCCCGTGGCGGGGGAAACAACAATCGTAACCGCGACGGCGAGC
GTTCGTCGCGCGGCAGCGGAGCCGGTCGGTACTCGCACAGGGAGGACCCG
GACCGCGACGACTGCACATACCGTAGGTGTGAGTCTCGCCGCTCCCACGA
CATTCACCGTTGCTGCTGTTCACCGTGAGGCAGAGGAGCACACTATTAGT
TTGCATAAACGATACAATATTCGTCCCCAGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig16951:455..2835+ >mRNA_L-elsbetiae_contig16951.4664.1 ID=mRNA_L-elsbetiae_contig16951.4664.1|Name=mRNA_L-elsbetiae_contig16951.4664.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1572bp|location=Sequence derived from alignment at L-elsbetiae_contig16951:455..2835+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCAAGGCGTAAGCCCCCGGACACTGAGTCCGACCAAGTAGATCCAGT
GGTGGACTACGAAAAGGAGGGCAGCGACAACCAGAACGCAAACGAAGACG
AGGAGTCGTCTAGTGACGGGGAAAGCAGCGACGAAGACCCGTCACTTGCT
GCTGACGGCCGTGCTGCCAGCCCTCCCCGTACCCCCGCTTCCGACAGCCG
TGCTGTCAACGCGTCGTCCGATGAGCTGCTGACCCCGATGTCTGAAGAAG
ATCTCGAAGCCCTCCTCTACAAGGAGGAGTTGCAGCAGCACATCGTGGCA
GCACGAGAGGGTCGTACACCCATCCCCTTCAGCCGCAGCTCGTTGGCGCG
GGCGGATGCAGCAGCGGCCAAACGTGAACTTGCCCTCCAAACTATGCCAA
GGCGTAAGCCCCCGGACACTGAGTCCGACCAAGTAGATCCAGTGGTGGAC
TACGAAAAGGAGGGCAGCGACAACCAGAACGCAAACGAAGACGAGGAGTC
GTCTAGTGACGGGGAAAGCAGCGACGAAGACCCGTCACTTGCTGCTGACG
GCCGTGCTGCCAGCCCTCCCCGTACCCCCGCTTCCGACAGCCGTGCTGTC
AACGCGTCGTCCGATGAGCTGCTGACCCCGATGTCTGAAGAAGATCTCGA
AGCCCTCCTCTACAAGGAGGAGTTGCAGCAGCACATCGTGGCAGCACGAG
AGGGTCGTACACCCATCCCCTTCAGCCGCAGCTCGTTGGCGCGGGCGGAT
GCAGCAGCGGCCAAACGTGAACTTGCCCTCCAAACTGCCCATGATGAGGC
ACAGCACAAGGCTGCCAACCGCCCCTCCACTCGTGTCGTGGTGGCGTCCA
GCGCGAGCAGAGGAAACAACAACCCTAACGCTCGCACGTCTGGCGGTAGC
AACACCAACGCCCGTGGCAATGGTGGCCGCAACGCCTACGCCCGTGGCGA
TGGAGGCGGCAGCAGCAGCACCGGCACCCGTGGTGGCGGTAGCACCAACA
ACACCCGCGCCCGTGGCGGGGGAAACAACAATCGTAACCGCGACGGCGAG
CGTTCGTCGCGCGGCAGCGGAGCCGGTCGGTACTCGCACAGGGAGGACCC
GGACCGCGACGACTGCACATACCGTAGGTGTGAGTCTCGCCGCTCCCACG
ACATTCACCGTTGCTGCTGTTCACCGTGAGCCCATGATGAGGCACAGCAC
AAGGCTGCCAACCGCCCCTCCACTCGTGTCGTGGTGGCGTCCAGCGCGAG
CAGAGGAAACAACAACCCTAACGCTCGCACGTCTGGCGGTAGCAACACCA
ACGCCCGTGGCAATGGTGGCCGCAACGCCTACGCCCGTGGCGATGGAGGC
GGCAGCAGCAGCACCGGCACCCGTGGTGGCGGTAGCACCAACAACACCCG
CGCCCGTGGCGGGGGAAACAACAATCGTAACCGCGACGGCGAGCGTTCGT
CGCGCGGCAGCGGAGCCGGTCGGTACTCGCACAGGGAGGACCCGGACCGC
GACGACTGCACATACCGTAGGTGTGAGTCTCGCCGCTCCCACGACATTCA
CCGTTGCTGCTGTTCACCGTGA back to top
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