mRNA_L-elsbetiae_contig16921.4641.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 145 bits (367), Expect = 2.740e-33 Identity = 117/305 (38.36%), Postives = 142/305 (46.56%), Query Frame = 1 Query: 769 DGSTALHYPAEDTSEVVSLLCLEGAAIDAADDQGCTPLHNAAKEGCAASVRALLTAGADVSLRCD-IGLSALDRAAASADANIDVVMAIIEHGADVNAPAAASGHIALHLAAMYNRAAAIEALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGASEVVALLLRRGADEKAIDNDGETPADAVGSNVEEQSSLAEDVERVRILLVKAPADRAWRRRGFLVLCRAHYPSGRVQLEQGSSHTRDTGMLKRARSLAGMSRTEAEWAGVASMLMGVG 1680 DG TALH+ A + GCTPLH A G AA+ +ALL AGADV+LR + +GLS+ HG DVNA +G AL +A+ +++A AI+ L G +E+V LLLRRGADE A+ +G T AD V EE SLAEDV+RVR LL +APADRAWRRRGFL+L RAHYP GRVQ +S G+ KR RS SR E +WAGV SMLMG G Sbjct: 473 DGKTALHH----------------AVAAGKVEMGCTPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXX--XXXXXXXXXXXXXXHGGDVNAKVN-NGITALRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSP--GTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAGVVSMLMGDG 756
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 112 bits (280), Expect = 5.870e-23 Identity = 106/293 (36.18%), Postives = 136/293 (46.42%), Query Frame = 1 Query: 760 AGTDGSTALHYPAEDTSEV-VSLLCLEGAAIDAADDQGCTPLHNAAKEGCAASVRALLTAGADVSLRCDI---GLSALDRAAASADANIDVVMAIIEHGADVNAPAAASGHIALHLAAMYNRAAAIEALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGASEVVALLLRRGADEKAIDNDGETPADAVGSNVEEQSSLA--EDVERVRILLVKAPADRAWRRRGFLVLCRAHYPSGRVQLEQGSSHTRDTGMLKRARSLA 1620 A D S LH A E V+ L GA + D QG TPLH A + G ++V+ALL A D S+R I S LD AA DA V+ AI++HG DVN G+ +LH+AA+ NR AAI+ L+ G + +V +LLR GADE A++ DG T A+ VG ++E + +DVERVR LL AP DRAWRRRGFLVLCRA + R +L SS+ G R RSL+ Sbjct: 34 ASVDSSDQLHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDAC--VLRAILQHGVDVNRRT--DGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQ-GVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKAR-RLRAASSNASSNG--PRVRSLS 318
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.070e-22 Identity = 102/281 (36.30%), Postives = 131/281 (46.62%), Query Frame = 1 Query: 769 DGSTALHYPAEDTSEV-VSLLCLEGAAIDAADDQGCTPLHNAAKEGCAASVRALLTAGADVSLRCDI---GLSALDRAAASADANIDVVMAIIEHGADVNAPAAASGHIALHLAAMYNRAAAIEALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGASEVVALLLRRGADEKAIDNDGETPADAVGSNVEEQSSLA--EDVERVRILLVKAPADRAWRRRGFLVLCRAHYPSGRVQLEQGSSHTRDTG 1593 D S LH A EV V+ L EGA + D QG TPLH A + G ++V+ALL A D S+ I S LD AA DA V+ AI++HG DVN G+ +LH+AA+ NR AAI+ L+ G + +V +LLR GADE A++ DG T A+ VG ++E + +D+ERVR LL APADRAWRRRG LVLCRA + R +L SS R G Sbjct: 86 DSSDQLHVSASQGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDAC--VLRAILQHGVDVNRRT--DGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQ-GVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSR-RLRAASSSARGIG 360
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 3.230e-16 Identity = 54/104 (51.92%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 1321 GASEVVALLLRRGADEKAIDNDGETPADAVGSNVEEQSSLAEDVERVRILLVKAPADRAWRRRGFLVLCRAHYPSGRVQLEQGSSHTRDTGMLKRARSLAGMSR 1632 GA+EVV LLR GADE + G D +G +VEE+ L EDVERVR LL APADRAWRRRG+L++CRA RV + +S T T + +R RS A M+R Sbjct: 258 GAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQ--PDRVPERRMTSGTHYTNVARRTRSRAKMAR 359
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 1.710e-13 Identity = 56/112 (50.00%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 1321 GASEVVALLLRRGADEKAIDNDGETPADAVGSNVE-EQSSLAEDVERVRILLVKAPADRAWRRRGFLVLCRAHYPSGRVQLEQGSSHTRDTGMLKRARSLAGMSRTEAEWAG 1653 G++E+V LLLRRGADE D +G+ PAD VG +E L +V V LL APADRAWRRRG LVLCRA R++ E G TR G+ +R RS A ++R++A AG Sbjct: 276 GSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGD-TRG-GLSRRTRSRAKLARSDAVGAG 385
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 6.260e-12 Identity = 50/98 (51.02%), Postives = 61/98 (62.24%), Query Frame = 1 Query: 1321 GASEVVALLLRRGADEKAIDNDGETPADAVGSNVEEQSSLAEDVERVRILLVKAPADRAWRRRGFLVLCRAHYPSGRVQLEQGSSHTRDTGMLKRARS 1614 GA EVV LLLR ADE D G TP + VG E S+ +V+RV LL AP DRAWRRRG LVLCRAH R+ L Q +SH +++ +L+ RS Sbjct: 254 GAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAH--PERLGLRQNASHVQESTVLRVTRS 349
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 1.880e-11 Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 1 Query: 1321 GASEVVALLLRRGADEKAIDNDGETPADAVGSNVEEQSSLAEDVERVRILLVKAPADRAWRRRGFLVLCRAH 1536 G+++VV LLLR GADE + GET AD++G+ ++ ED ER R LL +APADRAWRRRG LVLCRAH Sbjct: 288 GSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTD-PEDDERARSLLARAPADRAWRRRGLLVLCRAH 358
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 7.760e-11 Identity = 107/200 (53.50%), Postives = 129/200 (64.50%), Query Frame = 1 Query: 961 DIGLSALDRAAASADANIDVVMAIIEHGADVNAPAAASGHIALHLAAMYNRAAAIEALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGASEVVALLLRRGADEKAIDNDGETPADAVGSNVEEQSSLAEDVERVRILLVKAPADRAWRRRGFLVLCRAHYPSGRVQL 1560 + +S LD AA+S D ++++ +I+HG +VN AAA G ALH AA NRA AI+ L+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+ +VV LLLR GADE + G+T AD +G+ + +D ER R LL +APADRAWRRRG LVLC A YP R+QL Sbjct: 168 EFDMSFLDFAASSQD--VEILRMLIDHGMEVNL-AAAFG-TALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDD-ERARSLLTRAPADRAWRRRGLLVLCHA-YPD-RLQL 360
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 8.010e-11 Identity = 87/300 (29.00%), Postives = 124/300 (41.33%), Query Frame = 1 Query: 772 GSTALHYPAED-TSEVVSLLCLEGAA-IDAADDQGCTPLHNAAKEGCAASVRALLTAGADVSLR----CDIGLSALDRAAASADANIDVVMAIIEHGADVNAPAAASGHIALHLAAMYNRAAAIEALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-GASEVVALLLRRGADEKAIDNDGETPAD----------------------AVGSNVEEQSSLAEDVERVRILLVKAPADRAWRRRGFLVLCRAHYPSGRVQLEQGSSHTR 1584 G T LH A + VVS L +DA D +G +PL A++ G ++V ALL AGAD++LR +G++A+D A + ++ V+ AI+E+G +V A G ALH A A A++ LL G +V LLLR GA E A++ +G TP+D VG + SL ++++R R+LL +APADR WRRR +LV+ RA GR GS R Sbjct: 172 GRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKG--HVGVIEAIVENGGNVRATDT-YGLTALHHA---RGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDR 465
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 1.000e-9 Identity = 41/71 (57.75%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 1321 GASEVVALLLRRGADEKAIDNDGETPADAVGSNVEEQSSLAEDVERVRILLVKAPADRAWRRRGFLVLCRA 1533 G EVV LLLR GADE + +G ADA+G V E+ + E+ E VR LL APADRAWRRR LVLCRA Sbjct: 277 GIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRA 347 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16921.4641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16921.4641.1 >prot_L-elsbetiae_contig16921.4641.1 ID=prot_L-elsbetiae_contig16921.4641.1|Name=mRNA_L-elsbetiae_contig16921.4641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=560bp RTGRAGSAPSYTSLSKDMDNANAAELTQQQQQLPFTVGSRQMFMEAVRLAback to top mRNA from alignment at L-elsbetiae_contig16921:382..2062+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16921.4641.1 ID=mRNA_L-elsbetiae_contig16921.4641.1|Name=mRNA_L-elsbetiae_contig16921.4641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1681bp|location=Sequence derived from alignment at L-elsbetiae_contig16921:382..2062+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16921:382..2062+ >mRNA_L-elsbetiae_contig16921.4641.1 ID=mRNA_L-elsbetiae_contig16921.4641.1|Name=mRNA_L-elsbetiae_contig16921.4641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3360bp|location=Sequence derived from alignment at L-elsbetiae_contig16921:382..2062+ (Laminarionema elsbetiae ELsaHSoW15)back to top |