mRNA_L-elsbetiae_contig1690.4627.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Match: A0A6H5JPU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU5_9PHAE) HSP 1 Score: 266 bits (679), Expect = 1.980e-80 Identity = 144/197 (73.10%), Postives = 159/197 (80.71%), Query Frame = 1 Query: 226 EVQYDSRSGGGGGHYEREAISTRRAFLSKVA---ALMGAAAGVLPAAVGAGEVRSAGEVKKGIEADFLSRRYYVTGELTPSLYRPDCLFTDPTTRVASVDRYTAAVKLLFDPENAQVDLLSLEVKDDNHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSEGFITRHEETWSITALDAARATITPTAGPQAAATAS 807 + + + GG G H S+RRAFL+ VA A+ AAAG + GA R EVKKGIEADFLSRRYYVTG+LTPSLYRPDCLFTDPTTRV SV+RYTAAVKLLFDP+NAQVDLLSL +KDD HIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDS G I+ HEETWSI+AL+AARATITPTAGPQAA +S Sbjct: 75 DASHSDKYGGNGSHV----TSSRRAFLNHVAGAAAVTTAAAGGTLPSFGA-TARGVEEVKKGIEADFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVIKDDTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSNGLISLHEETWSISALEAARATITPTAGPQAAMESS 266
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Match: D7G4G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G9_ECTSI) HSP 1 Score: 232 bits (592), Expect = 1.010e-68 Identity = 110/121 (90.91%), Postives = 118/121 (97.52%), Query Frame = 1 Query: 427 RYYVTGELTPSLYRPDCLFTDPTTRVASVDRYTAAVKLLFDPENAQVDLLSLEVKDDNHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSEGFITRHEETWSITALDAARATITPTAGPQ 789 RYYVTG+LTPSLYRPDCLFTDPTTRV SV+RYTAAVKLLFDP+NAQVDLLSL VKDDNHIFAEW+LQGYLKFPWHPYVKPYTGTTLYTLDS+G I+RHEETWSI+AL+AARATITPTAGPQ Sbjct: 66 RYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLAVKDDNHIFAEWQLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITPTAGPQ 186
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Match: A0A0G4EPM9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EPM9_VITBC) HSP 1 Score: 152 bits (384), Expect = 1.090e-38 Identity = 76/135 (56.30%), Postives = 89/135 (65.93%), Query Frame = 1 Query: 370 EVRSAGEVKKGIEADFLSRRYYVTGELTPSLYRPDCLFTDPTTRVASVDRYTAAVKLLFDPENAQVDLLSLEVKDDNHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSEGFITRHEETWSITALDAARATITP 774 +VR+ E + DFL +YYVTG+LTPS+Y DC+F DPT V VD Y AV+ LFDP +Q DLL LEV DD+HI EWRL G LK PW P VKPYTG TLYTL+ G I RHEE W I+A A +T P Sbjct: 81 DVRTVAET---VRRDFLQGQYYVTGDLTPSIYAKDCIFIDPTVTVQGVDTYVRAVRNLFDPATSQADLLGLEVLDDSHIRVEWRLGGSLKLPWKPVVKPYTGRTLYTLNDRGLIVRHEEEWDISAAQAFLSTFIP 212
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Match: A0A2K1L393_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L393_PHYPA) HSP 1 Score: 142 bits (357), Expect = 1.330e-34 Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 388 EVKKGIEADFLSRRYYVTGELTPSLYRPDCLFTDPTTRVASVDRYTAAVKLLFDPENAQVDLLSLEVKDDNHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSEGFITRHEETWSITALDAARATITPTAGP 786 +VK+ IE D +YYVTG LTPS+YR +C FTDPTT V V++Y AAV+LLFDP+ +Q +LLS++V I WRL GYLK PW P++ PY G+T YTL +G I H+ETW+I+ L A T T GP Sbjct: 111 QVKEIIENDIRKGQYYVTGNLTPSIYRDNCKFTDPTTVVTGVNKYVAAVRLLFDPDLSQQELLSIDVTGPRTIEVNWRLGGYLKLPWKPHITPYEGSTRYTLGDDGLIESHDETWNISLLTALLELFTSTWGP 243
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Match: A0A176WGH4_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WGH4_MARPO) HSP 1 Score: 141 bits (355), Expect = 2.770e-34 Identity = 77/173 (44.51%), Postives = 110/173 (63.58%), Query Frame = 1 Query: 277 EAISTRRAFLSKVA-ALMGAAAGVL--PAAVGAGEVRSAG----EVKKGIEADFLSRRYYVTGELTPSLYRPDCLFTDPTTRVASVDRYTAAVKLLFDPENAQVDLLSLEVKDDNHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSEGFITRHEETWSITALDAARATITP 774 E ++ R L+ V A G+A L PA VGA EV+ E+KK IE D++SR Y VTG +T S+Y+ DC F DPTT V + +Y+ A+K+LFDP +++ +LL +EV + +WRL G+L FPWHPY+KPYTG++ YT+D +G I + E W I+ L+A +TP Sbjct: 68 EGLTRRETILAGVVTAWAGSAVSSLAFPAGVGAAEVKQTNLPIEEIKKVIEDDYVSRNYLVTGNMTKSVYKDDCRFHDPTTDVTGLQKYSDALKVLFDP-SSKSELLRIEVSGPRTVDVKWRLSGFLNFPWHPYIKPYTGSSRYTVDEDGLIESYSEEWDISVLEAFAQFLTP 239
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Match: A9RQK3_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RQK3_PHYPA) HSP 1 Score: 142 bits (357), Expect = 9.740e-34 Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 388 EVKKGIEADFLSRRYYVTGELTPSLYRPDCLFTDPTTRVASVDRYTAAVKLLFDPENAQVDLLSLEVKDDNHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSEGFITRHEETWSITALDAARATITPTAGP 786 +VK+ IE D +YYVTG LTPS+YR +C FTDPTT V V++Y AAV+LLFDP+ +Q +LLS++V I WRL GYLK PW P++ PY G+T YTL +G I H+ETW+I+ L A T T GP Sbjct: 191 QVKEIIENDIRKGQYYVTGNLTPSIYRDNCKFTDPTTVVTGVNKYVAAVRLLFDPDLSQQELLSIDVTGPRTIEVNWRLGGYLKLPWKPHITPYEGSTRYTLGDDGLIESHDETWNISLLTALLELFTSTWGP 323
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Match: D8RZI8_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RZI8_SELML) HSP 1 Score: 134 bits (338), Expect = 6.520e-33 Identity = 75/165 (45.45%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 283 ISTRRAFLSKVAALMGAAAGVLPAAVGAGEVRSA-GEVKKGIEADFLSRRYYVTGELTPSLYRPDCLFTDPTTRVASVDRYTAAVKLLFDPENAQVDLLSLEVKDDNHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSEGFITRHEETWSITALDAARATITP 774 ++ RR + L+G A VL A+ G + A E+++ I D R+YYVTG+LT S+Y DC F DPTT V VD Y AAVK LFDP +++ +LL + V I A+WRLQG LK PW P++ Y GTT YTL+ +GF+ H+ETW I+ L A +TP Sbjct: 3 LTGRRQLVFSPIVLLGFAPPVLLASEGDRQRHFAVDEIEQIIRQDIEDRQYYVTGDLTRSIYSDDCRFIDPTTNVQGVDSYVAAVKSLFDPSDSKHELLEIRVTSPTTIEAKWRLQGSLKLPWKPHIAAYEGTTTYTLNDDGFVASHKETWDISLLTAFIEFLTP 167
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Match: A0A7S0HE91_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HE91_9CRYP) HSP 1 Score: 133 bits (334), Expect = 3.490e-31 Identity = 64/117 (54.70%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 403 IEADFLSRRYYVTGELTPSLYRPDCLFTDPTTRVASVDRYTAAVKLLFDPENAQVDLLSLEVKDDNHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSEGFITRHEETWSITALDA 753 IE D +Y+VTG LT S+YR DC F DPTT V + RY AV+ LFDP++++V L S+ +DN I A+W LQG LK PW PY++PY GTT Y +D EG I H+ETWSITA +A Sbjct: 142 IERDLSMSQYFVTGNLTRSIYRDDCRFKDPTTDVRGLKRYILAVQNLFDPKDSKVILRSISSIEDNKILAKWSLQGSLKLPWKPYIQPYEGTTTYWIDPEGLIEFHDETWSITATEA 258
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Match: A0A7J7Q3V0_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q3V0_9CHLO) HSP 1 Score: 128 bits (321), Expect = 3.290e-30 Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1 Query: 388 EVKKGIEADFLSRRYYVTGELTPSLYRPDCLFTDPTTRVASVDRYTAAVKLLFDPENAQVDLLSLEVKDDNHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDS-EGFITRHEETWSITALDAARATITP 774 ++++ IE DF +YYVTG LT SLY P+C F DPTT V V +YTAAV LFDP ++ DL+S V N I WRL+G LK P +KPYTG+T+YT+D G ITRH+E W I+A+DA +T+ P Sbjct: 60 DIRQAIERDFSDGQYYVTGNLTSSLYDPNCTFKDPTTNVKGVQKYTAAVAALFDPAVSRADLVSSSVAGPNSISLRWRLEGRLKIGNLP-IKPYTGSTVYTVDEGSGLITRHDEAWDISAVDAFVSTLFP 188
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Match: A0A835SMB7_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SMB7_CHLIN) HSP 1 Score: 126 bits (316), Expect = 1.480e-29 Identity = 75/179 (41.90%), Postives = 101/179 (56.42%), Query Frame = 1 Query: 292 RRAFLSKVAALMGA----AAGVLPAAVGAGEVRSAGEVKKGIEA----DFLSR-----RYYVTGELTPSLYRPDCLFTDPTTRVASVDRYTAAVKLLFDPENAQVDLLSLEVKDDNHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSEGFITRHEETWSITALDAARATITPTAGPQ 789 RRA L+ AL A AAG LP R G+ + G+ A D L R +Y+VTG+LT ++ DC F DPT V + +Y A+K+LFDP ++V LLS+ + A+WRL GYL FPW+P V+P+ G T YTL EG I +TW +A +A R + TPTAGP+ Sbjct: 17 RRALLAGAVALAAAPLAGAAGALPLGPLGPVKRVGGDKRTGLTAEEVADVLRRDLEVGQYFVTGDLTREVFADDCRFVDPTNDVTGLSKYLTALKVLFDPTYSKVQLLSISATGPRTVEADWRLGGYLVFPWNPRVEPFKGHTAYTLSDEGLIVEQRQTWEKSAAEALRESFTPTAGPR 195 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1690.4627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1690.4627.1 >prot_L-elsbetiae_contig1690.4627.1 ID=prot_L-elsbetiae_contig1690.4627.1|Name=mRNA_L-elsbetiae_contig1690.4627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp MMHSALLFLLVVNTTSALGTRPQGSAASSACQRQTFRASTAVASASRSGAback to top mRNA from alignment at L-elsbetiae_contig1690:17456..21543+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1690.4627.1 ID=mRNA_L-elsbetiae_contig1690.4627.1|Name=mRNA_L-elsbetiae_contig1690.4627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4088bp|location=Sequence derived from alignment at L-elsbetiae_contig1690:17456..21543+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1690:17456..21543+ >mRNA_L-elsbetiae_contig1690.4627.1 ID=mRNA_L-elsbetiae_contig1690.4627.1|Name=mRNA_L-elsbetiae_contig1690.4627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1518bp|location=Sequence derived from alignment at L-elsbetiae_contig1690:17456..21543+ (Laminarionema elsbetiae ELsaHSoW15)back to top |