mRNA_L-elsbetiae_contig16857.4605.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 2.890e-21 Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 1 QSCALECEGYAFFGTQYGMECWCGGDETDHVQHGESELCDFECAGDASQICGGYWSMNVYQY 186 + C EC G +FG QYG EC+CGG+ TD +QHGES CD+EC GD+ Q+CGG+++M+VY Y Sbjct: 217 EMCEAECSGNTYFGMQYGTECFCGGESTDLLQHGESTACDYECPGDSEQVCGGFYAMSVYSY 278
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Match: D8LF45_ECTSI (Beta-xylosidase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF45_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 2.170e-19 Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 1 QSCALECEGYAFFGTQYGMECWCGGDETDHVQHGESELCDFECAGDASQICGGYWSMNVY 180 ++C CEGYAF+G QYG +C+CG + D +HGES+ C C GD ICGG W+MNVY Sbjct: 28 ETCKAACEGYAFYGLQYGKQCFCGASDEDFTRHGESQECLLRCTGDRKSICGGVWAMNVY 87
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Match: D7G4P0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P0_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 6.700e-16 Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 7 CALECEGYAFFGTQYGMECWCGGDETDHVQHGESELCDFECAGDASQICGGYWSMNVYQ 183 C+ C Y ++GTQY ECWCG ET + +G SE C CAGDAS+ICGG +SM+VYQ Sbjct: 101 CSGHCSAYPYYGTQYSTECWCGDGETAYDTNGASEECVMPCAGDASEICGGPYSMSVYQ 159
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Match: D8LDH2_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH2_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 8.250e-16 Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 1 QSCALECEGYAFFGTQYGMECWCGG----DETDHVQHGESELCDFECAGDASQICGGYWSMNVYQY 186 + CA CEG FFG QYG ECWCG D+ D +HG S C++ CAGD Q CGGYW++++Y+Y Sbjct: 416 EMCATYCEGDDFFGMQYGSECWCGSTDEKDDEDLFRHG-STTCEYPCAGDEEQTCGGYWAISLYEY 480
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Match: A0A6H5KL84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL84_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 3.690e-15 Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 7 CALECEGYAFFGTQYGMECWCGGDETDHVQHGESELCDFECAGDASQICGGYWSMNVYQ 183 C+ C Y ++GTQY +ECWCG + D+ +G S C CAGDAS+ CGG +SM+VYQ Sbjct: 41 CSDHCSAYPYYGTQYSVECWCGDENADYDANGASNECVMPCAGDASETCGGSYSMSVYQ 99
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Match: A0A6H5KTL8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL8_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 4.260e-15 Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 7 CALECEGYAFFGTQYGMECWCGGDETDHVQHGESELCDFECAGDASQICGGYWSMNVYQ 183 C+ C Y ++GTQY ECWCG + D+ +G S C CAGDAS++CGG +SM+VYQ Sbjct: 96 CSDHCSAYPYYGTQYSTECWCGDENADYGANGASNECVVPCAGDASEMCGGSYSMSVYQ 154
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 7.410e-15 Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 1 QSCALECEGYAFFGTQYGMECWCGGDETDHVQHGESELCDFECAGDASQICGGYWSMNVY 180 +SC C GYA++G QYG +C+CG + D+ +GES+ C C GDAS CGG W+M+VY Sbjct: 181 ESCKASCVGYAYYGLQYGEQCFCGTADEDYTVYGESDNCVLSCTGDASSTCGGSWAMDVY 240
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Match: D7FLI7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI7_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 3.520e-14 Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 1 QSCALECEGYAFFGTQYGMECWCGGDETDHVQHGESELCDFECAGDASQICGGYWSMNVY 180 Q+C C GYA+FG QYG +C+CG + D+ +GES+ C + C GD+ CGG W+M+++ Sbjct: 4 QTCKATCVGYAYFGLQYGKQCFCGTADEDYTVYGESDDCTYSCTGDSESTCGGRWAMDIF 63
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Match: D7G4N8_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N8_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 1.040e-13 Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 7 CALECEGYAFFGTQYGMECWCGGDETDHVQHGESELCDFECAGDASQICGGYWSMNVYQ 183 CA C G A++GTQY ECWCG D D+ +G S +CD C+G++ ++CGG ++M+VYQ Sbjct: 6 CATLCTGSAYYGTQYSQECWCG-DNVDYDANGFS-VCDMPCSGNSDEMCGGAYTMSVYQ 62
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Match: A0A6H5K223_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K223_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.490e-13 Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 1 QSCALECEGYAFFGTQYGMECWCGGDETDHVQHGESELCDFECAGDASQICGGYWSMNVY 180 Q CA C YA++GTQYG ECWCG D + GES C F C+GDA + CGG+ +M+VY Sbjct: 2 QFCADFCAEYAYYGTQYGEECWCGNSGYDTL--GESTDCSFGCSGDAGETCGGFNAMSVY 59 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16857.4605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16857.4605.1 >prot_L-elsbetiae_contig16857.4605.1 ID=prot_L-elsbetiae_contig16857.4605.1|Name=mRNA_L-elsbetiae_contig16857.4605.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=62bp QSCALECEGYAFFGTQYGMECWCGGDETDHVQHGESELCDFECAGDASQIback to top mRNA from alignment at L-elsbetiae_contig16857:2640..2825- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16857.4605.1 ID=mRNA_L-elsbetiae_contig16857.4605.1|Name=mRNA_L-elsbetiae_contig16857.4605.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=186bp|location=Sequence derived from alignment at L-elsbetiae_contig16857:2640..2825- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16857:2640..2825- >mRNA_L-elsbetiae_contig16857.4605.1 ID=mRNA_L-elsbetiae_contig16857.4605.1|Name=mRNA_L-elsbetiae_contig16857.4605.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=372bp|location=Sequence derived from alignment at L-elsbetiae_contig16857:2640..2825- (Laminarionema elsbetiae ELsaHSoW15)back to top |