mRNA_L-elsbetiae_contig16799.4568.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Match: D8LJL3_ECTSI (Alpha-dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL3_ECTSI) HSP 1 Score: 288 bits (737), Expect = 2.590e-95 Identity = 127/156 (81.41%), Postives = 140/156 (89.74%), Query Frame = 1 Query: 1 RWPCQCGLLPLFMRRDLLNKFNLLPVEEVTPPAVPPPPAGGVPVYHRTVTGHYNELGCPAAGAAGQSFGRNCPGYPPGARRESTPDPFLVAQKLLARRPSGPDNAYFKPAGDQLNILAAAWIQAMVHDWMDHTEGEPTELSGGKAHGCPMNSFKFK 468 +WPCQCGL+PL+MRR LNKFNLLPV+EV PP VPPPPAGGVPVYHRTVTGHYNEL CPAAG A ++ GRNCPGY PG+RRE+ PDPFLVAQKLLARRPSGP+ +FKPAG QLN+LAAAWIQAMVHDW+DHTE +PTELSGG AHGCPMN FKFK Sbjct: 50 KWPCQCGLVPLYMRRIFLNKFNLLPVDEVNPPVVPPPPAGGVPVYHRTVTGHYNELDCPAAGGANEALGRNCPGYAPGSRRENIPDPFLVAQKLLARRPSGPNKDFFKPAGAQLNVLAAAWIQAMVHDWVDHTEADPTELSGGAAHGCPMNKFKFK 205
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Match: A0A6H5KY43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY43_9PHAE) HSP 1 Score: 290 bits (741), Expect = 1.150e-92 Identity = 128/156 (82.05%), Postives = 140/156 (89.74%), Query Frame = 1 Query: 1 RWPCQCGLLPLFMRRDLLNKFNLLPVEEVTPPAVPPPPAGGVPVYHRTVTGHYNELGCPAAGAAGQSFGRNCPGYPPGARRESTPDPFLVAQKLLARRPSGPDNAYFKPAGDQLNILAAAWIQAMVHDWMDHTEGEPTELSGGKAHGCPMNSFKFK 468 +WPCQCGL+PL+MRR LNKFNLLPV+EV PP VPPPPAGGVPVYHRT+TGHYNEL CPAAG A ++ GRNCPGY PG+RRE+ PDPFLVAQKLLARRPSGP+ YFKPAG QLNILAAAWIQAMVHDW+DHTE +PTELSGG AHGCPMN FKFK Sbjct: 50 KWPCQCGLVPLYMRRIFLNKFNLLPVDEVNPPVVPPPPAGGVPVYHRTITGHYNELDCPAAGGANEALGRNCPGYAPGSRRENIPDPFLVAQKLLARRPSGPNKDYFKPAGAQLNILAAAWIQAMVHDWVDHTEADPTELSGGAAHGCPMNEFKFK 205
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Match: A0A7S2HGR1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGR1_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.250e-27 Identity = 72/164 (43.90%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 1 RW-PCQCGLLPLFMRRDLLNKFNLLPVEEVTP------PAVPPPPAGGVPVYHRTVTGHYNELGCPAAGAAGQSFGRNCPGYPPGARRESTPDPF-LVAQKLLARRPSGPDNAYFKPAGDQLNILAAAWIQAMVHDWMDHTEGEPTE-LSGGKAHGCPMNSFKF 465 RW P G +P+ + R++L++ NL P E P P VPP R G+ ++ P A G S GRNC P R S P LVAQ+LLAR F PAGDQLNI+AAAWIQAMVHDW+DH E E E L G+ GCPM FK Sbjct: 29 RWRPSVLGAIPILVHRNILDRENLYPAAEDPPRKGDTIPLVPP--------TGRPDDGYGTDVLHPTTAAEGSSIGRNCTAVPKSQRMPSADPPVQLVAQRLLARET-------FTPAGDQLNIIAAAWIQAMVHDWVDHYESEKEEVLDRGEEFGCPMKKFKI 177
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Match: A0A1X6NXY9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXY9_PORUM) HSP 1 Score: 108 bits (269), Expect = 2.200e-24 Identity = 71/151 (47.02%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 1 RWPCQCGLLPLFMRRDLLNKFNLLPV--EEVTPPAVPPPPAGGVPVYHRTVTGHYNELGCPAAGAAGQSFGRNCPGYPPGARRESTPDPFLVAQKLLARRPSGPDNAYFKPAGDQLNILAAAWIQAMVHDWMDHTE--GEPTELSGGKAHG 441 R P GL+ L RR +L LLPV E AVPPPPA V +RT N+ P AGA G GRN P P G RR P P +VA +LLARRPSG +K AGDQ N++AAAWIQ MVH W+ H G L G A G Sbjct: 72 RLPTLLGLVLLAARRVVLQHLALLPVGGEPAPAGAVPPPPAV---VPYRTPDASGNDREHPYAGAHGVYLGRNVPPVPVGERRLHEPPPQVVAARLLARRPSGAGGVAYKHAGDQFNVVAAAWIQFMVHSWLRHINEPGFGAGLPPGTADG 219
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Match: H2KX21_ORYSJ (Alpha-dioxygenase, putative, expressed n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=H2KX21_ORYSJ) HSP 1 Score: 100 bits (249), Expect = 2.130e-22 Identity = 71/161 (44.10%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 7 PCQCGLLPLFMRRDLLNKFNLLPVEEVTPPAVPPPPAGGVPVYHRTVTGHYNELGCPAAGAAGQSFGRNCPGYPPGARRE-STPDPFLVAQKLLARRPSGPDNAYFKPAGDQLNILAAAWIQAMVHDWMDHTEGE-------PTELSGGKAHGCPMNSFKF 465 P GLL L RR LL K+NLL V + A+ P +RT G YN+ AG+ FGRN P + E +PDPF+VA KLLARR +K G Q NILAAAWIQ MVHDWMDH E P E+ A+ CP+ SFKF Sbjct: 45 PVPIGLLYLNTRRTLLEKYNLLAVGRSSHGALFDPKE----FLYRTEDGKYNDPHNAEAGSQNTFFGRNM--EPVDQQDELMSPDPFVVATKLLARRE-------YKDTGKQFNILAAAWIQFMVHDWMDHMEDTGQIGITAPKEV----ANECPLKSFKF 188
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Match: A0A833V9T6_9POAL (Fatty acid alpha-dioxygenase n=2 Tax=Carex littledalei TaxID=544730 RepID=A0A833V9T6_9POAL) HSP 1 Score: 101 bits (251), Expect = 5.630e-22 Identity = 70/159 (44.03%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 1 RWPCQCGLLPLFMRRDLLNKFNLLPVEEVTPPAVPPPPAGGVPVYHRTVTGHYNELGCPAAGAAGQSFGRNCPGYPPGARRE-STPDPFLVAQKLLARRPSGPDNAYFKPAGDQLNILAAAWIQAMVHDWMDHTEG-EPTELSGGK--AHGCPMNSFKF 465 + P GLL L RR LL K+NLLPV P +RT G YN+ AG+ G FGRN P + E +PDP +VA KLLARR +K G Q NILAAAWIQ MVHDWMDH E + E+ + A CP+ SFKF Sbjct: 44 KMPVLIGLLYLNTRRTLLEKYNLLPVGNSNGTQFNPDN-----FRYRTGDGKYNDPDNAEAGSQGTFFGRNMD--PVDQKNELMSPDPMVVATKLLARRE-------YKDTGKQFNILAAAWIQFMVHDWMDHLEDTQQIEIIAPEEVASQCPLKSFKF 188
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Match: H2KX20_ORYSJ (Alpha-dioxygenase, putative, expressed n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=H2KX20_ORYSJ) HSP 1 Score: 100 bits (249), Expect = 7.470e-22 Identity = 71/161 (44.10%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 7 PCQCGLLPLFMRRDLLNKFNLLPVEEVTPPAVPPPPAGGVPVYHRTVTGHYNELGCPAAGAAGQSFGRNCPGYPPGARRE-STPDPFLVAQKLLARRPSGPDNAYFKPAGDQLNILAAAWIQAMVHDWMDHTEGE-------PTELSGGKAHGCPMNSFKF 465 P GLL L RR LL K+NLL V + A+ P +RT G YN+ AG+ FGRN P + E +PDPF+VA KLLARR +K G Q NILAAAWIQ MVHDWMDH E P E+ A+ CP+ SFKF Sbjct: 45 PVPIGLLYLNTRRTLLEKYNLLAVGRSSHGALFDPKE----FLYRTEDGKYNDPHNAEAGSQNTFFGRNM--EPVDQQDELMSPDPFVVATKLLARRE-------YKDTGKQFNILAAAWIQFMVHDWMDHMEDTGQIGITAPKEV----ANECPLKSFKF 188
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Match: PIOX_ORYSJ (Alpha-dioxygenase PIOX n=48 Tax=Poaceae TaxID=4479 RepID=PIOX_ORYSJ) HSP 1 Score: 100 bits (249), Expect = 1.050e-21 Identity = 71/161 (44.10%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 7 PCQCGLLPLFMRRDLLNKFNLLPVEEVTPPAVPPPPAGGVPVYHRTVTGHYNELGCPAAGAAGQSFGRNCPGYPPGARRE-STPDPFLVAQKLLARRPSGPDNAYFKPAGDQLNILAAAWIQAMVHDWMDHTEGE-------PTELSGGKAHGCPMNSFKF 465 P GLL L RR LL K+NLL V + A+ P +RT G YN+ AG+ FGRN P + E +PDPF+VA KLLARR +K G Q NILAAAWIQ MVHDWMDH E P E+ A+ CP+ SFKF Sbjct: 45 PVPIGLLYLNTRRTLLEKYNLLAVGRSSHGALFDPKE----FLYRTEDGKYNDPHNAEAGSQNTFFGRNM--EPVDQQDELMSPDPFVVATKLLARRE-------YKDTGKQFNILAAAWIQFMVHDWMDHMEDTGQIGITAPKEV----ANECPLKSFKF 188
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Match: A0A804UA66_MAIZE (Uncharacterized protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A804UA66_MAIZE) HSP 1 Score: 99.0 bits (245), Expect = 2.530e-21 Identity = 69/159 (43.40%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 1 RWPCQCGLLPLFMRRDLLNKFNLLPVEEVTPPAVPPPPAGGVPVYHRTVTGHYNELGCPAAGAAGQSFGRNCPGYPPGARRE-STPDPFLVAQKLLARRPSGPDNAYFKPAGDQLNILAAAWIQAMVHDWMDHTEG-EPTELSGGK--AHGCPMNSFKF 465 + P GLL L RR LL K+NLL V + P +RT G YN+ AG+ FGRN P E +PDPF+VA KLLARR +K G Q NILAAAWIQ MVHDWMDH E + E++ A+ CP+ SFKF Sbjct: 43 KMPVLIGLLYLNTRRTLLEKYNLLAVGSSHGALIDPKDQ----FMYRTGDGKYNDPDNAEAGSQYTFFGRNM--KPVDQEYELMSPDPFVVATKLLARRE-------YKDTGKQFNILAAAWIQFMVHDWMDHMEDTKQIEITAPNEVANKCPLKSFKF 188
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Match: A0A8B7BJY7_PHODC (alpha-dioxygenase 1-like n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7BJY7_PHODC) HSP 1 Score: 99.0 bits (245), Expect = 3.660e-21 Identity = 65/161 (40.37%), Postives = 87/161 (54.04%), Query Frame = 1 Query: 7 PCQCGLLPLFMRRDLLNKFNLLPVEEVTPPAVPPPPAGGVPVY-----HRTVTGHYNELGCPAAGAAGQSFGRNCPGYPPGARRESTPDPFLVAQKLLARRPSGPDNAYFKPAGDQLNILAAAWIQAMVHDWMDHTEG-EPTELSGGK--AHGCPMNSFKF 465 P GL+ L RR L +K+NLL V ++ G+P +RT+ G YN+ G+ FGRN PP ++ ++PDP +VA KLLARR +K G Q N++AAAWIQ MVHDWMDH E + EL+ A+ CP+ SFKF Sbjct: 45 PVLLGLVYLERRRALHDKYNLLNVGKID----------GIPFNPDDYPYRTMNGEYNDPENNKVGSQLTFFGRN---MPPMEQKLTSPDPVVVATKLLARRT-------YKDTGKQFNLIAAAWIQFMVHDWMDHLEDTQQVELTAPPEVANECPLKSFKF 185 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16799.4568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16799.4568.1 >prot_L-elsbetiae_contig16799.4568.1 ID=prot_L-elsbetiae_contig16799.4568.1|Name=mRNA_L-elsbetiae_contig16799.4568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp RWPCQCGLLPLFMRRDLLNKFNLLPVEEVTPPAVPPPPAGGVPVYHRTVTback to top mRNA from alignment at L-elsbetiae_contig16799:1443..3546+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16799.4568.1 ID=mRNA_L-elsbetiae_contig16799.4568.1|Name=mRNA_L-elsbetiae_contig16799.4568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2104bp|location=Sequence derived from alignment at L-elsbetiae_contig16799:1443..3546+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16799:1443..3546+ >mRNA_L-elsbetiae_contig16799.4568.1 ID=mRNA_L-elsbetiae_contig16799.4568.1|Name=mRNA_L-elsbetiae_contig16799.4568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=936bp|location=Sequence derived from alignment at L-elsbetiae_contig16799:1443..3546+ (Laminarionema elsbetiae ELsaHSoW15)back to top |