mRNA_L-elsbetiae_contig16780.4564.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Match: D7FIS6_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS6_ECTSI) HSP 1 Score: 117 bits (293), Expect = 3.070e-30 Identity = 54/68 (79.41%), Postives = 61/68 (89.71%), Query Frame = 1 Query: 64 MQGDTFVHKDGKSAVVRQPVTEEEKRGAYRAMLACPTHSIRLETADPLARDALKDFPFPVDPDRLPGI 267 MQG+TF HK GKSAVVRQP TEEE+RGAYRAM ACPT SIR+E +DP+ARDALKDFPFPVD +RLPG+ Sbjct: 1 MQGETFAHKSGKSAVVRQPETEEERRGAYRAMHACPTSSIRVEASDPIARDALKDFPFPVDSERLPGV 68
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Match: A0A835Z392_9STRA (4Fe-4S single cluster domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z392_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.570e-26 Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 4 NCRRNLFVDETCIDCDTCRWMQGDTFVHKDGKSAVVRQPVTEEEKRGAYRAMLACPTHSIRLETADPLARDALKDFPFPVDPDRLPGI 267 N NLFVDE+CIDCDTCRWM + ++ +S V++QP E+E+R AYRAM++CPT SIRLE D L +DA DFPFPV+ LPG+ Sbjct: 57 NVEGNLFVDESCIDCDTCRWMAPGIYGRENSQSNVIKQPEGEQERREAYRAMVSCPTGSIRLEQPDALVKDARNDFPFPVE--GLPGV 142
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Match: A0A1Y1IAW0_KLENI (Metallo-beta-lactamase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAW0_KLENI) HSP 1 Score: 104 bits (260), Expect = 8.510e-25 Identity = 48/88 (54.55%), Postives = 60/88 (68.18%), Query Frame = 1 Query: 4 NCRRNLFVDETCIDCDTCRWMQGDTFVHKDGKSAVVRQPVTEEEKRGAYRAMLACPTHSIRLETADPLARDALKDFPFPVDPDRLPGI 267 N + FVD TCIDCDTCRWM +TF H +G+SAV RQP T +E+ A +A+LACPT SIR ET +DA FP +DP+ LPG+ Sbjct: 103 NVEGDFFVDHTCIDCDTCRWMAPETFSHLNGQSAVHRQPQTPDERTRALQALLACPTASIRTETPPKDIKDAQNTFPLAIDPETLPGV 190
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Match: A0A067JL29_JATCU (Lactamase_B domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JL29_JATCU) HSP 1 Score: 99.0 bits (245), Expect = 5.930e-23 Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 4 NCRRNLFVDETCIDCDTCRWMQGDTFVHKDGKSAVVRQPVTEEEKRGAYRAMLACPTHSIRLETADPLARDALKDFPFPVDPDRLPGI 267 N + FVD TCIDCDTCRWM F D KSAV +QP T EE+ A +A+L+CPT+SIR E P A K FP P+D ++PG+ Sbjct: 43 NVEGDFFVDHTCIDCDTCRWMAPQIFTRIDAKSAVFKQPSTNEERLVALQALLSCPTNSIRTEKPAPDVLQAQKTFPMPIDEQKIPGV 130
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Match: R0GJ75_9BRAS (Lactamase_B domain-containing protein n=5 Tax=Camelineae TaxID=980083 RepID=R0GJ75_9BRAS) HSP 1 Score: 99.0 bits (245), Expect = 8.450e-23 Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 4 NCRRNLFVDETCIDCDTCRWMQGDTFVHKDGKSAVVRQPVTEEEKRGAYRAMLACPTHSIRLETADPLARDALKDFPFPVDPDRLPGI 267 N ++FVD TCIDCDTCRWM + F KD SAV++QP +EE+ A +A+L+CPT SIR ET +A FP VD D LPG+ Sbjct: 61 NVEGDIFVDNTCIDCDTCRWMVPEVFTRKDNMSAVIKQPTCKEERLNALQALLSCPTGSIRTETPPTDIGEAQDSFPLAVDKDTLPGV 148
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Match: UPI00053C1A11 (uncharacterized protein LOC104807169 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1A11) HSP 1 Score: 97.4 bits (241), Expect = 2.930e-22 Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 16 NLFVDETCIDCDTCRWMQGDTFVHKDGKSAVVRQPVTEEEKRGAYRAMLACPTHSIRLETADPLARDALKDFPFPVDPDRLPGI 267 +LFVD +CIDCDTCRWM + F DG SAV++QP +EE+ A +A+++CPT SIR ET A FP PVD +RLPGI Sbjct: 67 DLFVDNSCIDCDTCRWMAPEVFTRVDGMSAVIKQPSCKEERLNALQALVSCPTGSIRTETPPTDILRAQDTFPVPVDEERLPGI 150
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Match: A0A0D3A277_BRAOL (Lactamase_B domain-containing protein n=8 Tax=Brassiceae TaxID=981071 RepID=A0A0D3A277_BRAOL) HSP 1 Score: 97.4 bits (241), Expect = 3.080e-22 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 4 NCRRNLFVDETCIDCDTCRWMQGDTFVHKDGKSAVVRQPVTEEEKRGAYRAMLACPTHSIRLETADPLARDALKDFPFPVDPDRLPGI 267 N +++VD TCIDCDTCRWM + F D SAVV+QP +EE+ A +A+L+CPT SIR ET R+A + FP +D D+LPG+ Sbjct: 58 NVEGDIYVDSTCIDCDTCRWMVPEVFNRVDNMSAVVKQPTCKEERLNALQALLSCPTGSIRTETPPTDIREAQETFPLTLDQDKLPGV 145
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Match: A0A5J4ZJ65_9ASTE (Lactamase_B domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J4ZJ65_9ASTE) HSP 1 Score: 97.1 bits (240), Expect = 3.850e-22 Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 16 NLFVDETCIDCDTCRWMQGDTFVHKDGKSAVVRQPVTEEEKRGAYRAMLACPTHSIRLETADPLARDALKDFPFPVDPDRLPGI 267 +LFVD TCIDCDTCRWM +TF DG SAV +QP EEE+ A +A+L+CPT+SI E D K FP P++ R+PG+ Sbjct: 66 DLFVDHTCIDCDTCRWMAPETFTKVDGMSAVFKQPNYEEERLKALQALLSCPTNSIHTEKPPDGILDVQKTFPIPINEQRIPGV 149
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Match: A0A1R3GLX0_COCAP (CASP-like protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3GLX0_COCAP) HSP 1 Score: 97.4 bits (241), Expect = 8.640e-22 Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 16 NLFVDETCIDCDTCRWMQGDTFVHKDGKSAVVRQPVTEEEKRGAYRAMLACPTHSIRLETADPLARDALKDFPFPVDPDRLPGI 267 ++FVD TCIDCDTCRWM F DG SAV +QP EE++ A +A+L+CPT SIR E DA K FP P+D +LPG+ Sbjct: 72 DIFVDHTCIDCDTCRWMAPQVFTRVDGMSAVSKQPTCEEDRLKALQALLSCPTGSIRTEEPPADILDAQKTFPIPIDEKKLPGV 155
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Match: A0A1R3GM35_COCAP (Beta-lactamase-like protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3GM35_COCAP) HSP 1 Score: 96.3 bits (238), Expect = 9.020e-22 Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 16 NLFVDETCIDCDTCRWMQGDTFVHKDGKSAVVRQPVTEEEKRGAYRAMLACPTHSIRLETADPLARDALKDFPFPVDPDRLPGI 267 + FVD TCIDCDTCRWM F DG SAV +QP +E++ A +A+L+CPT SIR E P + K FP P+D +LPG+ Sbjct: 69 DFFVDHTCIDCDTCRWMAPQVFTRVDGMSAVYKQPTCKEDRLKALQALLSCPTSSIRTEVPPPDILETQKTFPIPIDEKKLPGV 152 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16780.4564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16780.4564.1 >prot_L-elsbetiae_contig16780.4564.1 ID=prot_L-elsbetiae_contig16780.4564.1|Name=mRNA_L-elsbetiae_contig16780.4564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp MNCRRNLFVDETCIDCDTCRWMQGDTFVHKDGKSAVVRQPVTEEEKRGAYback to top mRNA from alignment at L-elsbetiae_contig16780:344..860- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16780.4564.1 ID=mRNA_L-elsbetiae_contig16780.4564.1|Name=mRNA_L-elsbetiae_contig16780.4564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=517bp|location=Sequence derived from alignment at L-elsbetiae_contig16780:344..860- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16780:344..860- >mRNA_L-elsbetiae_contig16780.4564.1 ID=mRNA_L-elsbetiae_contig16780.4564.1|Name=mRNA_L-elsbetiae_contig16780.4564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=534bp|location=Sequence derived from alignment at L-elsbetiae_contig16780:344..860- (Laminarionema elsbetiae ELsaHSoW15)back to top |