mRNA_L-elsbetiae_contig1677.4561.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1677.4561.1 vs. uniprot
Match: D7G754_ECTSI (Protein kinase domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G754_ECTSI) HSP 1 Score: 155 bits (393), Expect = 5.390e-42 Identity = 82/147 (55.78%), Postives = 104/147 (70.75%), Query Frame = 1 Query: 10 PSLTGKVLKGTWRLGELVGTGACADVYE-VTGVSDGVGTQAGKFVAKIAPLPADSPPQS----KKKHNEEKRNANMLFYERTLYQGYLRPLRDPGCVQIPDQGYGEDQDLRYLVMTRLGPDVLAAKTESEPWPVSRTAGYAQQMLQI 435 PSLTG VLK W+LG LVG+G CA+VYE + ++ G G FVAKIAPLP PP K+K EE+++A+M++YE TLY+G+L G V+IP GYGEDQ+LRYLVM+RLGPDV AA +SE W V+R AGYA+QML + Sbjct: 3 PSLTGTVLKNKWKLGALVGSGGCAEVYEAIDARAESAGASDGPFVAKIAPLPVGLPPAMTKGRKRKKTEEEKHADMIYYEYTLYKGFL--AEHGGVVEIPPGGYGEDQNLRYLVMSRLGPDVEAALKKSEGWSVARKAGYARQMLAL 147
BLAST of mRNA_L-elsbetiae_contig1677.4561.1 vs. uniprot
Match: D7FQK2_ECTSI (Protein kinase domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK2_ECTSI) HSP 1 Score: 129 bits (324), Expect = 2.410e-33 Identity = 72/146 (49.32%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 16 LTGKVLKGTWRLGELVGTGACADVYEVTGVSDGVGTQAGKFVAKIAPLPADSPPQSKK------KHNEEKRNANMLFYERTLYQGYLRPLRDPGCVQIPDQGYGEDQDLRYLVMTRLGPDVLAAKTESEPWPVSRTAGYAQQMLQI 435 LTG VL W+LG LVG+G CA+VYE + G FVAKIAP+P P +KK + EE+++A+M+ YE LY L + G V+IP GYGEDQ+LRYLVMTRLG DV AA S+ W V+R GYA+QML + Sbjct: 5 LTGTVLNKKWKLGALVGSGGCAEVYEAEATGSRGQSADGPFVAKIAPVPVALPLAAKKGRYAYKRKTEEEKHADMIHYEHVLYTASL--AKHVGVVEIPRNGYGEDQNLRYLVMTRLGLDVEAALKTSKGWSVARKTGYARQMLAL 148
BLAST of mRNA_L-elsbetiae_contig1677.4561.1 vs. uniprot
Match: W7TN39_9STRA (Casein kinase n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN39_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 5.230e-15 Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = 1 Query: 22 GKVLKGTWRLGELVGTGACADVYEVTGVSDGVGTQAGKFVAKIAPLPADSPPQSKKKHNEE----KRNANMLFYERTLYQGYLRPLRDPGCVQIPDQ-GYGEDQDLRYLVMTRLGPDVLAA-KTESEPWPVSRTAGYAQQML 429 G +L+G W+LG L+G GAC V+ V V+ Q ++V K+APLP + +K N++ KRNA+ L+ E+ +Y+ YL + P +P YGED+ R+LVM RLG D+ +++ + + A Y +QML Sbjct: 25 GLILRGRWKLGRLLGEGACGQVFAVEDVTGAQNEQ--EWVIKLAPLPPPAAAGVARKKNKKDESLKRNADTLYMEQLVYKNYLMGV--PHVPALPALLSYGEDKGFRFLVMQRLGQDLSQLFESQGRYFSPATLADYGKQML 162
BLAST of mRNA_L-elsbetiae_contig1677.4561.1 vs. uniprot
Match: A0A7S3JYC0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYC0_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 9.960e-9 Identity = 45/141 (31.91%), Postives = 64/141 (45.39%), Query Frame = 1 Query: 7 LPSLTGKVLKGTWRLGELVGTGACADVYEVTGVSDGVGTQAGKFVAKIAPLPADSPPQSKKKHNEEKRNANMLFYERTLYQGYLRPLRDPGCVQIPDQGYGEDQDLRYLVMTRLGPDVLAAKTESEPWPVSRTAGYAQQML 429 + SL G VL G WR+G L+G GACA VY + D FV K + L ++ E+KR A+ LF E +Y + YGE++ RYLVM RLG + +E E + V++ M+ Sbjct: 1 MSSLEGSVLDGKWRVGHLLGVGACAQVYAASACDDEKSNDV--FVIKASKL---------SRNKEQKRLADTLFQEHLVYDQICNRYSRYFAHKYK---YGEEKGWRYLVMERLGHQI----SECEKYSVAQICSIGYDMV 123
BLAST of mRNA_L-elsbetiae_contig1677.4561.1 vs. uniprot
Match: A0A448YXH9_9STRA (Protein kinase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXH9_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.470e-8 Identity = 37/131 (28.24%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 34 KGTWRLGELVGTGACADVYEVTGVSDGVGTQAGKFVAKIAPLPADSPPQSKKKHNEEKRNANMLFYERTLYQGYLRPLRDPGCVQIPDQG-------YGEDQDLRYLVMTRLG-------PDVLAAKTESE 384 K W++GE++G GACA V + + +G T+ F K+APLP ++KK ++ ++ NA +L+YE+ +Y R L+ +P+ YG++ R+ + R+ P +L +K+ S+ Sbjct: 14 KRKWKVGEILGHGACATVCSLGKIENGTCTET-NFAVKLAPLPVK---KTKKGNSPQEMNAKLLYYEQMIYTTQFRGLQGKLIPNVPNLSNSRDPPIYGDESGYRFFTLERMDTTISAVVPSLLMSKSSSK 140 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1677.4561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1677.4561.1 >prot_L-elsbetiae_contig1677.4561.1 ID=prot_L-elsbetiae_contig1677.4561.1|Name=mRNA_L-elsbetiae_contig1677.4561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp MPLPSLTGKVLKGTWRLGELVGTGACADVYEVTGVSDGVGTQAGKFVAKIback to top mRNA from alignment at L-elsbetiae_contig1677:15829..17046+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1677.4561.1 ID=mRNA_L-elsbetiae_contig1677.4561.1|Name=mRNA_L-elsbetiae_contig1677.4561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1218bp|location=Sequence derived from alignment at L-elsbetiae_contig1677:15829..17046+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1677:15829..17046+ >mRNA_L-elsbetiae_contig1677.4561.1 ID=mRNA_L-elsbetiae_contig1677.4561.1|Name=mRNA_L-elsbetiae_contig1677.4561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=870bp|location=Sequence derived from alignment at L-elsbetiae_contig1677:15829..17046+ (Laminarionema elsbetiae ELsaHSoW15)back to top |