mRNA_L-elsbetiae_contig16722.4537.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Match: A0A6H5K8V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V8_9PHAE) HSP 1 Score: 192 bits (487), Expect = 4.740e-58 Identity = 105/121 (86.78%), Postives = 108/121 (89.26%), Query Frame = 2 Query: 2 MSEIMKNAEAKGEEGDVDEAQELFEQAEALQQTKAGLEAKALQ---------SAPLHLNTSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESLLEER 337 MSEIMKNAEAKGEEGDVDEAQELFEQAE LQ+TKA LEAKALQ SAPLHL TSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLES+ +ER Sbjct: 146 MSEIMKNAEAKGEEGDVDEAQELFEQAEELQRTKAELEAKALQDSIMEARAQSAPLHLATSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESIHKER 266
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Match: A0A2G5CEI8_AQUCA (Uncharacterized protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CEI8_AQUCA) HSP 1 Score: 103 bits (258), Expect = 5.890e-24 Identity = 61/114 (53.51%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 2 MSEIMKNAEAKGEEGDVDEAQELFEQAEALQQTKAGLEAKALQSAPLHLNTSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESLLEEREA 343 ++E +K AE GE+G VDEAQ+ E+AEAL++ A EA L++S TA ++ T QKLRVCDICGA LS++DS+ RLA+HFGGKLH+G++ IR KL L EEREA Sbjct: 213 INEKLKKAEDLGEQGMVDEAQKALEEAEALKKLGARQEAV--------LDSSKYTAADV-RITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQEEREA 317
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Match: UPI001FB19E3D (luc7-like protein n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB19E3D) HSP 1 Score: 101 bits (252), Expect = 3.720e-23 Identity = 60/112 (53.57%), Postives = 79/112 (70.54%), Query Frame = 2 Query: 2 MSEIMKNAEAKGEEGDVDEAQELFEQAEALQQTKAGLEAKALQSAPLHLNTSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESLLEER 337 ++E +K AE GE+G VDEAQ+ E+AEAL++ A E P+H +TS TA ++ T QKLRVCDICGA LS++DS+ RLA+HFGGKLH+G++ IR KL L EER Sbjct: 208 INERLKKAEDLGEQGMVDEAQKALEEAEALKKLAARQE-------PVH-DTSKYTAVDV-RITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELKEER 310
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Match: A0A7S2V537_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V537_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.970e-23 Identity = 58/118 (49.15%), Postives = 72/118 (61.02%), Query Frame = 2 Query: 2 MSEIMKNAEAKGEEGDVDEAQELFEQAEALQQTKAGLEAKALQSAPLH--LNTSNPTAQEL-----GNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESLLEE 334 +S+ MK E GEEGDVD AQEL E+ E L+Q K + K ++ A L + L G QKLRVCD+CGA LSI+DS+ RLA+HFGGKLH+GFV IR KL + E Sbjct: 119 ISDAMKEVEQAGEEGDVDRAQELMEKVEELKQQKIEAQTKLMREASGQPSLGGGGEGGESLVDSLSGREVNQKLRVCDVCGAFLSIYDSDRRLADHFGGKLHMGFVQIRQKLAEIKVE 236
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Match: A0A2G9HVU1_9LAMI (Spliceosome subunit n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HVU1_9LAMI) HSP 1 Score: 100 bits (249), Expect = 1.020e-22 Identity = 58/113 (51.33%), Postives = 80/113 (70.80%), Query Frame = 2 Query: 2 MSEIMKNAEAKGEEGDVDEAQELFEQAEALQQTKAGLEAKALQSAPLHLNTSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESLLEERE 340 ++E +K AE GE+G +DEAQ+ E+AEAL++ A E P+ +++S TA ++ T QKLRVCDICGA LS++DS+ RLA+HFGGKLH+G++ IR KL L EERE Sbjct: 211 INEKLKKAEELGEQGKIDEAQKALEEAEALKKLPARQE-------PV-VDSSKYTAADV-RITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLADLQEERE 314
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Match: A0A2P2LVH4_RHIMU (Uncharacterized protein MANES_12G003500 n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LVH4_RHIMU) HSP 1 Score: 96.3 bits (238), Expect = 1.210e-22 Identity = 56/113 (49.56%), Postives = 77/113 (68.14%), Query Frame = 2 Query: 2 MSEIMKNAEAKGEEGDVDEAQELFEQAEALQQTKAGLEAKALQSAPLHLNTSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESLLEERE 340 ++E +K AE GE+G VDEAQ+ E+AEAL++ A E L++S TA ++ T QKLRVCDICGA LS++DS+ RLA+HFGGKLH+G++ IR KL L ++E Sbjct: 71 INEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPP--------LDSSKYTAADV-RITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLTELQVQKE 174
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Match: A0A0B0MSE8_GOSAR (Putative RNA-binding protein Luc7-like 1 n=1 Tax=Gossypium arboreum TaxID=29729 RepID=A0A0B0MSE8_GOSAR) HSP 1 Score: 98.6 bits (244), Expect = 1.240e-22 Identity = 59/112 (52.68%), Postives = 79/112 (70.54%), Query Frame = 2 Query: 2 MSEIMKNAEAKGEEGDVDEAQELFEQAEALQQTKAGLEAKALQSAPLHLNTSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESLLEER 337 ++E +K AE GE+G VDEAQ+ E+AEAL++ A E P+ L++S TA ++ T QKLRVCDICGA LS++DS+ RLA+HFGGKLH+G++ IR KL L EER Sbjct: 75 INEKLKKAEDLGEKGMVDEAQKALEEAEALKKLPARQE-------PV-LDSSKYTAADV-RITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLAELQEER 177
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Match: A0A6I9TKA9_SESIN (putative RNA-binding protein Luc7-like 1 isoform X1 n=3 Tax=Lamiales TaxID=4143 RepID=A0A6I9TKA9_SESIN) HSP 1 Score: 99.8 bits (247), Expect = 2.080e-22 Identity = 59/113 (52.21%), Postives = 80/113 (70.80%), Query Frame = 2 Query: 2 MSEIMKNAEAKGEEGDVDEAQELFEQAEALQQTKAGLEAKALQSAPLHLNTSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESLLEERE 340 ++E +K AE GE+G VDEAQ+ E+AEAL++ A E P+ L++S TA ++ T QKLRVCDICGA LS++DS+ RLA+HFGGKLH+G++ IR KL L EER+ Sbjct: 211 INEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQE-------PV-LDSSKYTAADV-RITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQEERD 314
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Match: A0A830C1Q3_9LAMI (Luc7-like protein n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830C1Q3_9LAMI) HSP 1 Score: 98.6 bits (244), Expect = 2.250e-22 Identity = 58/113 (51.33%), Postives = 80/113 (70.80%), Query Frame = 2 Query: 2 MSEIMKNAEAKGEEGDVDEAQELFEQAEALQQTKAGLEAKALQSAPLHLNTSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESLLEERE 340 ++E +K AE GE+G VDEAQ+ E+AEAL++ A E P+ L++S TA ++ T QKLRVCDICGA LS++DS+ RLA+HFGGKLH+G++ IR KL L EE++ Sbjct: 207 INEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQE-------PV-LDSSKYTAADV-RITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQEEKD 310
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Match: A0A2P2LVD9_RHIMU (Uncharacterized protein MANES_13G003600 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LVD9_RHIMU) HSP 1 Score: 95.9 bits (237), Expect = 2.370e-22 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 2 MSEIMKNAEAKGEEGDVDEAQELFEQAEALQQTKAGLEAKALQSAPLHLNTSNPTAQELGNATQQKLRVCDICGALLSIFDSNDRLAEHFGGKLHIGFVDIRTKLESLLEER 337 ++E +K AE GE+G VDEAQ+ E+AEAL++ A E L++S TA ++ T QKLRVCDICGA LS++DS+ RLA+HFGGKLH+G++ IR KL L + R Sbjct: 2 INEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPARQEPP--------LDSSKYTAADV-RITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIRDKLTELQDAR 104 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16722.4537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16722.4537.1 >prot_L-elsbetiae_contig16722.4537.1 ID=prot_L-elsbetiae_contig16722.4537.1|Name=mRNA_L-elsbetiae_contig16722.4537.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp DERDHEERRGQRGGGGRGRGPGAVRAGGSAAADQGGAGGQGAAVGPSPPQback to top mRNA from alignment at L-elsbetiae_contig16722:1685..3425- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16722.4537.1 ID=mRNA_L-elsbetiae_contig16722.4537.1|Name=mRNA_L-elsbetiae_contig16722.4537.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1741bp|location=Sequence derived from alignment at L-elsbetiae_contig16722:1685..3425- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16722:1685..3425- >mRNA_L-elsbetiae_contig16722.4537.1 ID=mRNA_L-elsbetiae_contig16722.4537.1|Name=mRNA_L-elsbetiae_contig16722.4537.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=690bp|location=Sequence derived from alignment at L-elsbetiae_contig16722:1685..3425- (Laminarionema elsbetiae ELsaHSoW15)back to top |