mRNA_L-elsbetiae_contig167.4520.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig167.4520.1
Unique NamemRNA_L-elsbetiae_contig167.4520.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Match: D8LI71_ECTSI (ARL2, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI71_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 2.880e-122
Identity = 176/186 (94.62%), Postives = 181/186 (97.31%), Query Frame = 1 
Query:   25 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGFNIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLMVFANKQDLSGALGAAEIAETLGLESTQFANRHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS 582
            MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDI+AIEPTLGFNIKT+EYKGY+LNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASL+VFANKQDL GALGAAEIA+ LGLES QFANRHWSIV CSAVTGEGL QGVDWMVSDIGARIFMMS
Sbjct:    1 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLLVFANKQDLVGALGAAEIAQVLGLESKQFANRHWSIVACSAVTGEGLAQGVDWMVSDIGARIFMMS 186
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BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Match: A0A7S2CN96_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CN96_9STRA)

HSP 1 Score: 315 bits (807), Expect = 8.850e-106
Identity = 157/190 (82.63%), Postives = 172/190 (90.53%), Query Frame = 1 
Query:   16 RARMGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGFNIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLMVFANKQDLSGALGAAEIAETLGLESTQFAN-RHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS 582
            R  MGLLSILKKVKQKEKEVRLLILGLDNAGKTTI+KKFNG+DI  IEPTLGFNIKTLEYKG+KLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDS+DR R++DCKRELH+LL QEKLAGASL++FANKQDL+GAL A EIA+ L L S +FA+ RHWSI  CSAVTGEGL  GVDWMV+DI +RIFMMS
Sbjct:   11 RRTMGLLSILKKVKQKEKEVRLLILGLDNAGKTTILKKFNGEDISTIEPTLGFNIKTLEYKGFKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSSDRWRMEDCKRELHNLLDQEKLAGASLLIFANKQDLAGALTAEEIAQVLDLHSDRFASGRHWSIHACSAVTGEGLVDGVDWMVTDISSRIFMMS 200
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BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Match: A0A835YQ34_9STRA (ARL2, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ34_9STRA)

HSP 1 Score: 300 bits (768), Expect = 4.940e-100
Identity = 149/188 (79.26%), Postives = 166/188 (88.30%), Query Frame = 1 
Query:   25 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGFNIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLMVFANKQ--DLSGALGAAEIAETLGLESTQFANRHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS 582
            MGLLSILKKVK+KE+EVRLLILGLDNAGKTTIVKKFNG+DI  I PTLGFNI TLE+KG+KLNVWDVGGQQTIRSYWRNYFEQTDG+IWVVDSADR RLQDC+RELH LL QEKLAGASL+VFANKQ  DL+GA+ +AEIAE L L S +F+ RHW+I  CSAVTG GL  GVDW+V DI +RIFMM+
Sbjct:    1 MGLLSILKKVKEKEREVRLLILGLDNAGKTTIVKKFNGEDITTISPTLGFNINTLEHKGFKLNVWDVGGQQTIRSYWRNYFEQTDGIIWVVDSADRARLQDCRRELHALLDQEKLAGASLLVFANKQAIDLAGAVQSAEIAELLDLGSERFSTRHWAIRACSAVTGAGLADGVDWVVDDIASRIFMMA 188
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BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Match: H3GA42_PHYRM (Uncharacterized protein n=30 Tax=Oomycota TaxID=4762 RepID=H3GA42_PHYRM)

HSP 1 Score: 299 bits (766), Expect = 9.270e-100
Identity = 142/186 (76.34%), Postives = 164/186 (88.17%), Query Frame = 1 
Query:   25 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGFNIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLMVFANKQDLSGALGAAEIAETLGLESTQFANRHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS 582
            MGLLSILKKVK+KEKE+R+L+LGLDNAGKTTI+KKF G DI  I PTLGF+I+TLEYK +KLNVWDVGGQQTIRSYWRNYFEQTDGL+WVVDSADR RL+DCKREL  LL QEKLAGA+L++FANKQDL GAL +AEIA+ LGL S QF+ RHWSIV CSAVTG+GL  G+DW+V D+ +RIF+M 
Sbjct:    1 MGLLSILKKVKEKEKEIRVLMLGLDNAGKTTILKKFMGQDITEISPTLGFDIQTLEYKDFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLEDCKRELSSLLTQEKLAGATLLIFANKQDLPGALSSAEIADALGLRSAQFSTRHWSIVSCSAVTGDGLVDGIDWLVGDVASRIFLME 186
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BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Match: W7T532_9STRA (Adp-ribosylation factor-like protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T532_9STRA)

HSP 1 Score: 297 bits (760), Expect = 7.830e-99
Identity = 148/187 (79.14%), Postives = 165/187 (88.24%), Query Frame = 1 
Query:   25 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGFNIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLMVFANKQDLSGALGAAEIAETLGLESTQFAN-RHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS 582
            MGLLSILKKVK+KEKE+RLLILGLDNAGKTTI+KKFNG++I  IEPTLGFNIKTLEY+GY LNVWDVGGQQTIRSYWRNYFE TDGLIWVVDSADR RL+ C++ELH LL QEKLAGASL+VFANKQDL GAL   EIA TLGLE   FA  RHW+IVGCSA+TG+GL+ GV WMV DI +RIFM++
Sbjct:    1 MGLLSILKKVKRKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLEYQGYLLNVWDVGGQQTIRSYWRNYFEATDGLIWVVDSADRRRLEVCRQELHALLQQEKLAGASLLVFANKQDLQGALPPGEIALTLGLEDEAFAKGRHWTIVGCSAMTGDGLEHGVGWMVRDIASRIFMLN 187
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BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Match: K3X431_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X431_GLOUD)

HSP 1 Score: 295 bits (755), Expect = 4.350e-98
Identity = 142/186 (76.34%), Postives = 163/186 (87.63%), Query Frame = 1 
Query:   25 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGFNIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLMVFANKQDLSGALGAAEIAETLGLESTQFANRHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS 582
            MGLLSILKKVK+KEKE+R+L+LGLDNAGKTTI+KKF G DI  I PTLGF+I+TLEYK +KLNVWDVGGQQTIRSYWRNYFEQTDGL+WVVDSADR RL DCKREL  LL QEKLAGA+L++FANKQDL GAL A+EIA+ L L S QF NRHW+IV CSAVTG GL +G+DW+V+DI +RIF+M 
Sbjct:    1 MGLLSILKKVKEKEKEIRVLMLGLDNAGKTTILKKFMGQDITEISPTLGFDIQTLEYKNFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLDDCKRELKQLLTQEKLAGATLLIFANKQDLPGALTASEIADYLELRSEQFVNRHWNIVACSAVTGAGLLEGIDWLVADIASRIFLME 186
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BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Match: A0A5D6XTH0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTH0_9STRA)

HSP 1 Score: 295 bits (754), Expect = 6.170e-98
Identity = 142/186 (76.34%), Postives = 163/186 (87.63%), Query Frame = 1 
Query:   25 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGFNIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLMVFANKQDLSGALGAAEIAETLGLESTQFANRHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS 582
            MGLLSILKKVK+KEKE+R+L+LGLDNAGKTTI+KKF G DI  I PTLGF+I+TLEYK +KLNVWDVGGQQTIR+YWRNYFEQTDGL+WVVDSADR RL+DCKREL  LL QEKLAGA+L++FANKQDL GA+ AAEIA+ L L S QFANRHW+IV CSA TG+GL  GVDW+V DI +RIF+M 
Sbjct:    1 MGLLSILKKVKEKEKEIRVLMLGLDNAGKTTILKKFLGQDISEISPTLGFDIQTLEYKDFKLNVWDVGGQQTIRAYWRNYFEQTDGLVWVVDSADRRRLEDCKRELQKLLTQEKLAGATLLIFANKQDLPGAVAAAEIADILELRSEQFANRHWNIVSCSAFTGDGLVAGVDWLVRDIASRIFLME 186
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BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Match: A0A812ZH54_SYMMI (ARL2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZH54_SYMMI)

HSP 1 Score: 291 bits (745), Expect = 1.440e-96
Identity = 133/186 (71.51%), Postives = 164/186 (88.17%), Query Frame = 1 
Query:   25 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGFNIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLMVFANKQDLSGALGAAEIAETLGLESTQFANRHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS 582
            MGLL+ILKKVKQKE+E+R+LILGLDNAGKTTI+KKFNG+D+H I PT+GFNIK+LEY+GY LN+WDVGGQ+TIR+YWRNYFEQTDG+IWVVDSADR RL++C+ +L +LL QEKLAGASL++FANKQDL GAL   +I+E L L     + RHW+I GCSA+TGEGL+ GVDW+V+DI +RIF+MS
Sbjct:    1 MGLLTILKKVKQKEQELRILILGLDNAGKTTILKKFNGEDVHEISPTVGFNIKSLEYRGYTLNMWDVGGQKTIRAYWRNYFEQTDGIIWVVDSADRWRLEECRNQLRELLSQEKLAGASLLIFANKQDLGGALSVGDISEVLQLSGDDISGRHWTIFGCSAMTGEGLESGVDWIVNDIASRIFLMS 186
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BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Match: W4H472_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4H472_9STRA)

HSP 1 Score: 288 bits (737), Expect = 2.360e-95
Identity = 139/186 (74.73%), Postives = 159/186 (85.48%), Query Frame = 1 
Query:   25 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGFNIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLMVFANKQDLSGALGAAEIAETLGLESTQFANRHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS 582
            MGLL+ILKKVK+KEKE+R+L+LGLDNAGKTTI+KKF G DI +I PTLGF+I+TLEYK YKLNVWDVGGQQTIRSYWRNYFEQTDGL+WVVDSADR RL+DCKREL  LL QEKLAGA+L++FANKQDL GAL   +I   LGL  +QFANRHW I  CSA TG+GL  G+DWMVSDI  RI+M+ 
Sbjct:    1 MGLLTILKKVKRKEKELRILMLGLDNAGKTTILKKFMGQDISSISPTLGFDIQTLEYKQYKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLEDCKRELVALLTQEKLAGATLLIFANKQDLPGALSPEDIVLALGLHESQFANRHWKIHSCSAFTGDGLADGIDWMVSDISNRIYMLE 186
[Close]
BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Match: A0A7S3PUZ8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUZ8_9STRA)

HSP 1 Score: 287 bits (734), Expect = 1.820e-94
Identity = 137/187 (73.26%), Postives = 164/187 (87.70%), Query Frame = 1 
Query:   25 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGFNIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLMVFANKQDLSGALGAAEIAETLGLESTQ-FANRHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS 582
            MGLLSILKKVK+KE+EVRLLILGLDNAGKTTI++KF+G+DI  IEPTLGFNIK+LE++ +KLNVWDVGGQ+TIR+YWRNYFEQTDGLIWVVDS+DR RL+ C+ EL  LLGQEKLAGASL++FANKQD++GAL + EIAE L L++   F+ RHWSI GCSAVTG GL  G+DWM  D+ +RIFM+S
Sbjct:   29 MGLLSILKKVKEKEREVRLLILGLDNAGKTTILRKFSGEDIDKIEPTLGFNIKSLEHRSFKLNVWDVGGQRTIRAYWRNYFEQTDGLIWVVDSSDRARLETCRDELFSLLGQEKLAGASLLIFANKQDIAGALSSDEIAEVLQLKTNPIFSKRHWSIFGCSAVTGNGLVNGIDWMTDDVASRIFMLS 215
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig167.4520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI71_ECTSI2.880e-12294.62ARL2, ARF-like Ras superfamily GTPase n=2 Tax=Ecto... [more]
A0A7S2CN96_9STRA8.850e-10682.63Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835YQ34_9STRA4.940e-10079.26ARL2, ARF-like ras superfamily GTPase n=1 Tax=Trib... [more]
H3GA42_PHYRM9.270e-10076.34Uncharacterized protein n=30 Tax=Oomycota TaxID=47... [more]
W7T532_9STRA7.830e-9979.14Adp-ribosylation factor-like protein 2 n=2 Tax=Mon... [more]
K3X431_GLOUD4.350e-9876.34Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XTH0_9STRA6.170e-9876.34Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A812ZH54_SYMMI1.440e-9671.51ARL2 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
W4H472_9STRA2.360e-9574.73Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A7S3PUZ8_9STRA1.820e-9473.26Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig167contigL-elsbetiae_contig167:49224..52100 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score357.8
Seed ortholog evalue3e-96
Seed eggNOG ortholog2880.D8LI71
Preferred nameARL2
KEGG koko:K07943,ko:K21596
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000132,GO:0000166,GO:0000226,GO:0000278,GO:0000281,GO:0000910,GO:0001505,GO:0001882,GO:0001883,GO:0002090,GO:0002791,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0004857,GO:0005095,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005759,GO:0005794,GO:0005813,GO:0005815,GO:0005818,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0005912,GO:0005924,GO:0005925,GO:0006457,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006897,GO:0006996,GO:0007010,GO:0007017,GO:0007021,GO:0007043,GO:0007049,GO:0007098,GO:0007154,GO:0007163,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007399,GO:0007405,GO:0007548,GO:0008064,GO:0008104,GO:0008150,GO:0008283,GO:0008356,GO:0009790,GO:0009792,GO:0009914,GO:0009987,GO:0010638,GO:0010646,GO:0010648,GO:0010810,GO:0010811,GO:0010817,GO:0012505,GO:0015630,GO:0015695,GO:0015696,GO:0015870,GO:0015893,GO:0016020,GO:0016043,GO:0016192,GO:0016328,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0017145,GO:0019001,GO:0019003,GO:0019222,GO:0022008,GO:0022402,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0023061,GO:0030010,GO:0030030,GO:0030054,GO:0030055,GO:0030100,GO:0030154,GO:0030155,GO:0030234,GO:0030540,GO:0030695,GO:0030832,GO:0030833,GO:0030865,GO:0031023,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031122,GO:0031323,GO:0031334,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032271,GO:0032273,GO:0032501,GO:0032502,GO:0032507,GO:0032535,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0032886,GO:0032940,GO:0032956,GO:0032970,GO:0033036,GO:0033043,GO:0033365,GO:0034260,GO:0034315,GO:0034329,GO:0034330,GO:0034332,GO:0034333,GO:0034504,GO:0034613,GO:0034622,GO:0035639,GO:0036094,GO:0036445,GO:0036465,GO:0040001,GO:0042221,GO:0042493,GO:0043086,GO:0043087,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043297,GO:0043622,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045165,GO:0045185,GO:0045196,GO:0045216,GO:0045785,GO:0046660,GO:0046883,GO:0046903,GO:0048103,GO:0048167,GO:0048259,GO:0048488,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048699,GO:0048731,GO:0048806,GO:0048856,GO:0048869,GO:0050708,GO:0050789,GO:0050790,GO:0050794,GO:0050796,GO:0050804,GO:0050805,GO:0050808,GO:0050896,GO:0051046,GO:0051049,GO:0051125,GO:0051128,GO:0051130,GO:0051179,GO:0051223,GO:0051234,GO:0051235,GO:0051293,GO:0051294,GO:0051301,GO:0051336,GO:0051346,GO:0051457,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051649,GO:0051651,GO:0051653,GO:0051656,GO:0055057,GO:0055059,GO:0060255,GO:0060292,GO:0060589,GO:0060627,GO:0061351,GO:0061458,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070161,GO:0070201,GO:0070507,GO:0070727,GO:0070830,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072089,GO:0072595,GO:0090066,GO:0090087,GO:0090276,GO:0097061,GO:0097159,GO:0097367,GO:0097435,GO:0098657,GO:0098722,GO:0098772,GO:0098916,GO:0099003,GO:0099080,GO:0099173,GO:0099177,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0106027,GO:0110053,GO:0120036,GO:1901265,GO:1901363,GO:1901374,GO:1902850,GO:1902903,GO:1902905,GO:1903047,GO:1903530
EggNOG free text desc.GTP binding
EggNOG OGsKOG0073@1,KOG0073@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000,ko03036,ko04031
Ec32 ortholog descriptionARL2, ARF-like Ras superfamily GTPase
Ec32 orthologEc-14_003390.1
Exons4
Model size896
Cds size561
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig167.4520.1prot_L-elsbetiae_contig167.4520.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig167 49535..52076 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815694.1985526-UTR-L-elsbetiae_contig167:49223..495341622815694.1985526-UTR-L-elsbetiae_contig167:49223..49534Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig167 49224..49534 -
1691683042.6752462-UTR-L-elsbetiae_contig167:49223..495341691683042.6752462-UTR-L-elsbetiae_contig167:49223..49534Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig167 49224..49534 -
1622815694.2682998-UTR-L-elsbetiae_contig167:52076..521001622815694.2682998-UTR-L-elsbetiae_contig167:52076..52100Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig167 52077..52100 -
1691683042.7463067-UTR-L-elsbetiae_contig167:52076..521001691683042.7463067-UTR-L-elsbetiae_contig167:52076..52100Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig167 52077..52100 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815694.211678-CDS-L-elsbetiae_contig167:49534..497561622815694.211678-CDS-L-elsbetiae_contig167:49534..49756Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig167 49535..49756 -
1691683042.6861546-CDS-L-elsbetiae_contig167:49534..497561691683042.6861546-CDS-L-elsbetiae_contig167:49534..49756Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig167 49535..49756 -
1622815694.2233782-CDS-L-elsbetiae_contig167:50208..502981622815694.2233782-CDS-L-elsbetiae_contig167:50208..50298Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig167 50209..50298 -
1691683042.7015662-CDS-L-elsbetiae_contig167:50208..502981691683042.7015662-CDS-L-elsbetiae_contig167:50208..50298Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig167 50209..50298 -
1622815694.2385838-CDS-L-elsbetiae_contig167:51034..512181622815694.2385838-CDS-L-elsbetiae_contig167:51034..51218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig167 51035..51218 -
1691683042.7182927-CDS-L-elsbetiae_contig167:51034..512181691683042.7182927-CDS-L-elsbetiae_contig167:51034..51218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig167 51035..51218 -
1622815694.2566285-CDS-L-elsbetiae_contig167:52011..520761622815694.2566285-CDS-L-elsbetiae_contig167:52011..52076Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig167 52012..52076 -
1691683042.7338965-CDS-L-elsbetiae_contig167:52011..520761691683042.7338965-CDS-L-elsbetiae_contig167:52011..52076Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig167 52012..52076 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig167.4520.1

>prot_L-elsbetiae_contig167.4520.1 ID=prot_L-elsbetiae_contig167.4520.1|Name=mRNA_L-elsbetiae_contig167.4520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=187bp
MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDIHAIEPTLGF
NIKTLEYKGYKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQ
DCKRELHDLLGQEKLAGASLMVFANKQDLSGALGAAEIAETLGLESTQFA
NRHWSIVGCSAVTGEGLKQGVDWMVSDIGARIFMMS*
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mRNA from alignment at L-elsbetiae_contig167:49224..52100-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig167.4520.1 ID=mRNA_L-elsbetiae_contig167.4520.1|Name=mRNA_L-elsbetiae_contig167.4520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2877bp|location=Sequence derived from alignment at L-elsbetiae_contig167:49224..52100- (Laminarionema elsbetiae ELsaHSoW15)
CCAAGGAGCGAGGAAAGAGCGAGAATGGGGCTGCTTAGTATACTCAAGAA
AGTTAAGCAGAAGGAGAAGGAGGTTCGCCTCCTCATCTTGTGAGTAGACT
TGTTTTACAATACGCGGTTTTGCGACGCGCCGACACTCAGAGAGGGATCC
TCCTCGTTTGAATAGGCCGCCCCACCTACCAGAGCACCCTACTACTATGT
AGCTACTTGTACACCATTTTTTTTTGTTTACCCAATGGCACTCTGTGACG
GTCCGTTATGGTTGTACACGCCCCACGCGAACTTGATGCTTCCTTGGATT
AGTTCATCGGGCGATACAGGATGAATAGTTTGGAACGGATGCAGCGTATC
TTTGTAGATTATGTACAGGACTGCCATGTAGGAGTGTTTTGACCTGTGAT
TCGTGCAGACGTCGTATGTACATATCTCTGCTACATAGATAGCGAACATG
GACTAGTACACGTACCTACTACCATAGATCAGTGACCATCATTTTAAAAC
TCCTTGCCAAGAAGATTTCGATTGAACTAGACTATATAGCTTTGACTAAC
GCCGTGGTTGTGCAGGCTACAGCGAAGCACTTACGAAAGGTACCTTATAG
TTAAAATCGGAGTAGATGTACTGCTACTGCACTTTTTTAGGAGACCTTGT
GAGCTATCATACAGCACAGACAGATGTGGGCATCTACTGCTGTAGACTAT
AGTGCCTACAGCAGTAGTCTAAGATCTGGTATTGCGAGAATCCAACACAA
CAACGAATAAGTGACGCTCTCTCGCCGCCCCCGCCCAAGGTGGGCGTCCT
TTTTATGTAGCATCGTTGTTGCTCTGTTTCTCCGTTTGTGTGTTCATTCA
ACCCCCCTTTCCCTCTCCCCGCTTCGTTCCAGGGGTCTCGACAACGCTGG
CAAGACCACCATCGTCAAGAAGTTCAACGGGGACGATATCCATGCCATCG
AGCCCACTCTTGGTTTCAACATCAAGACGCTGGAGTACAAGGGCTACAAG
CTCAACGTCTGGGACGTGGGGGGGCAGCAGACCATCCGTTCCTACTGGAG
AAATTATTTTGAGCAGGTCTGTTGGCGTGTTTGCGTAAACGCTGTACATA
CTTCGCAGAACCTTGCCGGTGTTAGATGTAGGTTTATCAAACTTGAGAGG
AGAACGATCGTCTCCCGCAGGTGATACTGAGACGTTGGTAACTGCTTCAT
CGCCGCCATCTCAATAGCGCCATATACCTGGTGCACGCCACGCCCCTGCG
TTTCATACAGCCACAAAAACAGCACCATATATACTTCTACGAAGCACATC
ACCGCTAGTCTTCAGCTGTCATATTTGAAGCACTTCTGCGATCTTTTGTG
TTTCCCATAGTTCTTACCAGCACAATAACATAAGACTCAAATTTTGACGG
GCATCCCAGACGAGGGAAAGCGACGGCTGAACCCTTCTCGCGACAAAAAT
ATTAGGCGGGCACCGCAGAAAAGGGTAGTGGGGGCCTTGGGGGAAAGAAA
CCCTTCTTTGTGACCACGGTTCAGTACTCTGGCAAGATGCTCTCGTGGCA
AGGATCCCATCGAGCACTGGAAATATATGTGAAGAAGAAAAAACACAATC
CCACGAAGAGGCACAGACAACGGAACCACCGGTGAGGTGTCCCCTGAAGT
GCTAGGTACTTCTGAACTCTTCTACAGGTCCTTTCATAGGTGCCGGGAGA
ATTTCGACCAGGATTGCTTCAAACCAATACCTGCATACCACAGCAGCTTT
ATAAGCAACAATCGAGATTGACTTTTTTGCGCTTTTTTGTTTTTCGTGGC
AGACCGACGGGCTGATTTGGGTGGTAGACAGCGCGGACAGGGGTCGATTA
CAGGACTGCAAGCGGGAGCTGCACGACTTGCTCGGACAAGAGGTAAAACG
CGCTTGTCCATGTATTCGTTCATGTTTTACAGAAATTGGTGTAGTGTGGA
ACCGTGGTTTCCTAGAACAAATGCAGCCATGCAGGCATCAGCTCATCAAC
CGACGCAAGGTTATTGTCGGGGGTGGGGTTGTTGAGCTGGCCCCCTTTCT
GCCAGCCCCCCTACAGAGGGGGCATAAGCGATTGCGTAGGTACTCGCTTC
TTAGAGGTGACACCCACGCGCGCTCCAGGCCAGGACCTAAAATTCAGGAT
TGGCACAGCACCATGTTTTTGTAGTCACGCGTCCATCTTGTAACAGCGTC
TTCATGACAGTCCTGGGGGCAGGAGTATCTCGTGTTTGGGACTACGGCGC
CCCGCGTGTCGCCCTCCCTCATCTCGCGCAAAATAACCACACCCGCAACT
TCGGGGATTGCTGTCGTCATACACACACACATACACGCCCGCAGAAACTG
GCAGGAGCATCCTTGATGGTTTTCGCTAACAAGCAAGACCTCTCCGGGGC
GCTCGGAGCAGCGGAGATCGCCGAGACCCTCGGCCTCGAATCTACGCAGT
TCGCCAACCGCCACTGGAGCATCGTCGGGTGCAGCGCGGTTACCGGGGAA
GGGCTGAAGCAGGGGGTGGATTGGATGGTCAGCGATATCGGAGCCCGAAT
TTTCATGATGTCGTGAAGGCGCTTCCGAGAGCACGACGTACTGTTGTACC
AGAACAAAAGATGGGGGTGCCTGGACGCGGAGCCTTTGGTGGCCATCGGG
CGAAAGGATAAAACACAAGGCGGGGAGGCAGCTCAACAAAGGTCGGGACC
CTACGTGCGTCGTGGCGGACTGCCACTGTTATGGTTCTTTATCGTCGAGC
TCGACTTGGAGGGCGTGACTTCAGTAGTGGAAAGCACGTATGGGGGGAGG
TGTGGCCGGAATACCTTTGGCGGTAACGTCTGAACCAAACTTCCTGTAGT
GGGCTCGATCAGATCGATCGATCAATC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig167:49224..52100-

>mRNA_L-elsbetiae_contig167.4520.1 ID=mRNA_L-elsbetiae_contig167.4520.1|Name=mRNA_L-elsbetiae_contig167.4520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1122bp|location=Sequence derived from alignment at L-elsbetiae_contig167:49224..52100- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGCTGCTTAGTATACTCAAGAAAGTTAAGCAGAAGGAGAAGGAGGT
TCGCCTCCTCATCTTATGGGGCTGCTTAGTATACTCAAGAAAGTTAAGCA
GAAGGAGAAGGAGGTTCGCCTCCTCATCTTGGGTCTCGACAACGCTGGCA
AGACCACCATCGTCAAGAAGTTCAACGGGGACGATATCCATGCCATCGAG
CCCACTCTTGGTTTCAACATCAAGACGCTGGAGTACAAGGGCTACAAGCT
CAACGTCTGGGACGTGGGGGGGCAGCAGACCATCCGTTCCTACTGGAGAA
ATTATTTTGAGCAGGGGTCTCGACAACGCTGGCAAGACCACCATCGTCAA
GAAGTTCAACGGGGACGATATCCATGCCATCGAGCCCACTCTTGGTTTCA
ACATCAAGACGCTGGAGTACAAGGGCTACAAGCTCAACGTCTGGGACGTG
GGGGGGCAGCAGACCATCCGTTCCTACTGGAGAAATTATTTTGAGCAGAC
CGACGGGCTGATTTGGGTGGTAGACAGCGCGGACAGGGGTCGATTACAGG
ACTGCAAGCGGGAGCTGCACGACTTGCTCGGACAAGAGACCGACGGGCTG
ATTTGGGTGGTAGACAGCGCGGACAGGGGTCGATTACAGGACTGCAAGCG
GGAGCTGCACGACTTGCTCGGACAAGAGAAACTGGCAGGAGCATCCTTGA
TGGTTTTCGCTAACAAGCAAGACCTCTCCGGGGCGCTCGGAGCAGCGGAG
ATCGCCGAGACCCTCGGCCTCGAATCTACGCAGTTCGCCAACCGCCACTG
GAGCATCGTCGGGTGCAGCGCGGTTACCGGGGAAGGGCTGAAGCAGGGGG
TGGATTGGATGGTCAGCGATATCGGAGCCCGAATTTTCATGATGTCGTGA
AAACTGGCAGGAGCATCCTTGATGGTTTTCGCTAACAAGCAAGACCTCTC
CGGGGCGCTCGGAGCAGCGGAGATCGCCGAGACCCTCGGCCTCGAATCTA
CGCAGTTCGCCAACCGCCACTGGAGCATCGTCGGGTGCAGCGCGGTTACC
GGGGAAGGGCTGAAGCAGGGGGTGGATTGGATGGTCAGCGATATCGGAGC
CCGAATTTTCATGATGTCGTGA
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