mRNA_L-elsbetiae_contig1663.4480.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 229 bits (583), Expect = 1.900e-63 Identity = 153/299 (51.17%), Postives = 189/299 (63.21%), Query Frame = 3 Query: 1002 NPNSQIS-GDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQ-QGGNPASVGGYVNAQDSFGAAPLKHAVGGCSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKK--VREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEEKRKDKITSESLWMALPIL--RRKARRRGVVLAPLLRFSSR 1880 N NS+ S G TPLY AA +G VDA R+LL AKADPLL SG T LPLDAAA GH VV EL++Q+G++ CGG SGGV AL AA+ ++++ M +L AGVVDTG AL AA +GGE P+KFLLEQ + YVN +D G PL + PRV VR L++A ADTTS V + GG D TPL TMN +R K V A+ EQL+ E IRRLLL+VEAVHA+SWLW S + T AA + D+ T+ S + LP+L RR+AR R V LA LLR+SS+ Sbjct: 140 NLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRPRV--VRLLVEAGADTTSPVAVRNQLGGD-DVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAA-RGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 214 bits (546), Expect = 2.720e-57 Identity = 140/299 (46.82%), Postives = 180/299 (60.20%), Query Frame = 3 Query: 1002 NPNSQI-SGDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQG--GNPASVGGYVNAQDSFGAAPLKHAVGGC-SPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVRE-KDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEEKRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSRS 1883 NP+ Q+ G T L+ AA G V +R LLR A+PLL + T++PLD AA GH VV EL+Q+LG+E C S G AL +AA +H+D MA+L AGVVDTG AL AA G EA VKFLL + G G Y+NA+D G PL GC S R+VR L+DA ADTTS VQ + GG V F TPLA+T LR+K V + K AT+E L E I RLLL+V+AVHA+SWLW S P A E + + + L + LPIL+R+ +RR ++A LLR+S ++ Sbjct: 232 NPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVV-FNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPA--LKLMLPILKRRTKRRCGLVATLLRYSVKT 527
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 195 bits (496), Expect = 4.300e-51 Identity = 136/290 (46.90%), Postives = 172/290 (59.31%), Query Frame = 3 Query: 1023 GDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASV-GGYVNAQDSFGAAPLKHAVGGCSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEE---KRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSR 1880 G TPLY AA G V AV +LL AKADPLL E LPLD AA GH VV EL++Q+G++ CGG SGG +AL AA +D MA+L AGVVDTG AL AA +GGEAP+KFLLEQ G ++ Y+N + G L + C PRV V+ L++A ADTTS V + G+ DF TPL TM L + K T E+ N E IRRLLL+ EAVHA+SWLW S P T+A + + T+ + ++ L I RR R+G+ LA LLR+SS+ Sbjct: 148 GATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRPRV--VQLLVEAGADTTSPVLICN-QPGEDDFHITPLGLTMCLLGGRSA--KPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGL-LAALLRYSSK 431
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 194 bits (492), Expect = 7.990e-51 Identity = 132/297 (44.44%), Postives = 174/297 (58.59%), Query Frame = 3 Query: 1017 ISGDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLKHAVGGC-----SPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPP----TTNAAEEKRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSR 1880 + G+TPL+RA + G ++A R LLRA A+PL+ + T LPLD+AA G++ V+ EL+Q++G+E CGG S G AL A G V MA+L AGVVDTG AL +A G EA VK+LL+ + G YVN +D G PL ++ C S RV R L++A ADTT+ ++ T+ S G V F TPL T++ L+ KKV ++++L EGIRRLLLQVEAVHA SWLW S+ NAAE + L LPILRR+ARR GVV L R + Sbjct: 132 VDGETPLFRAMTEGQLEATRELLRANANPLITRAPLP---TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGP-GAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTN-SMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRK 423
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 175 bits (444), Expect = 2.450e-44 Identity = 121/259 (46.72%), Postives = 143/259 (55.21%), Query Frame = 3 Query: 1092 KADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVN-AQDSFGAAPLKHAVGGC-SPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTT---NAAEEKRKDKITSESLWMALPILRRKARRRGVVL 1853 KA+ LL SG T +PLD A GH VV EL QLGV CGGVSGGV++L A + VD M +L GVVDTG AL AA E VKFLL+ Q G A YVN D FG PL + C S R+ R LIDAEADT S V T SG TPL + +SLRQ KV K+ATEEQL + + I RLL QV+AVHA+SWLW S+ + AA + K I L +LR +RGVV+ Sbjct: 155 KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAW---YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTK-SGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVV 409
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 174 bits (440), Expect = 1.130e-43 Identity = 117/264 (44.32%), Postives = 145/264 (54.92%), Query Frame = 3 Query: 1101 PLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLKHAV--GGCSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHS-AVPPTTNAAEEKRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSRS 1883 PLL ++ SG T +PLD AA GH+ V ELVQ+ G+ C G S GVDALG AA +H+D MA+L AGVVDTG AL G E +KFLLEQ+G A +D G PL AV G CSPRV VR L+DA AD T AV+ D G + TPL L +K V E AT +QL N RRLLLQVE VHA SWLW A P + + + + L LPI+ R++ RRG L + R + ++ Sbjct: 170 PLLPTRMS-SGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTTGPCSPRV--VRLLVDAGADATLAVRVPDGFGRSTKY--TPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKKA 428
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 162 bits (410), Expect = 1.380e-40 Identity = 128/307 (41.69%), Postives = 165/307 (53.75%), Query Frame = 3 Query: 1002 NPNSQ-ISGDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLKH---------AVGGCSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEEKRKDKITSESLWMALPIL----RRKARRRGVVLAPLLRFSSR 1880 N NS+ G TPL+ AA G VDAVR+LL AK DPLL + S SLPLD AA GH+ VV EL++Q+G+ CGG SGGV AL AAR +H+D + VL AGVVDTG A + ++G SVG ++ +H A R RVVR L++A ADTTS V G D I TP+ TM L + + TEEQLN E I RLLL+VEA+HA+SWLW S + T + + D+ TS+S +L R +++ R V LA LLR+SS+ Sbjct: 42 NLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLARGR------------RIWRRGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTVPIDGLPG--TDNI-TPMGLTMLLLHD--LGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGT-DRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSK 330
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 162 bits (410), Expect = 1.540e-39 Identity = 111/246 (45.12%), Postives = 134/246 (54.47%), Query Frame = 3 Query: 1170 GHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVN-AQDSFGAAPLKHAVGGC-SPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPP---TTNAAEEKRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSRSAGG 1892 GH VV EL+QQLGV CGGVS GV++L AA ++VD M +L GVVDTG AL AA + E VKFLL+ Q G YVN D FG PL + C S R+ R LID ADT S V T SG TPL + SLRQ KV K+ATEEQL + + I RLL Q+EAVHA+SWLW S+ P AA + K +L +LR +RGVVL + R + G Sbjct: 191 GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTW---YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTR-SGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEELVRG 432
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 165 bits (417), Expect = 4.810e-39 Identity = 111/268 (41.42%), Postives = 155/268 (57.84%), Query Frame = 3 Query: 1101 PLLGKK-VQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLKHAVGGC--SPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHS-AVPPTTNAAEEKR---KDKITSES-LWMALPILRRKARRRGVVLAPLLRFSSR 1880 PLLG+ G LPLDAA H VV +L+QQLG++ CGG S G DA WA + + D + +LA G +DTG L AA FG EA VK LL+QQ G YVN + G P+ +G S RV+R +DA ADT S V+ T+ G ++ F GTPLAYT LR ++ R D+T+ + + E +RR+LLQ+EA+ A+SW W S A+ A ++ R K ++T ++ L + LP RRKAR R V++ + R+S + Sbjct: 333 PLLGRMDTYLRGRIILPLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDTYVNKKQPDGRTPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQL-FRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLP-RRRKARARRVLVMAMSRYSRK 598
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 159 bits (402), Expect = 9.210e-39 Identity = 116/274 (42.34%), Postives = 151/274 (55.11%), Query Frame = 3 Query: 1083 LRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVD-TGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVN-AQDSFGAAPLKHAVGG-----CSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEEKRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSRS 1883 L AKA+PLL + SG + +PL+ AA G VV EL+++ G+ CGG SGG+DAL AA VD M++L AGVVD G AL A G EA V FLL QQ + YVN A+D G L + G C+PR+ RRL+DA ADTTSAVQ + TPL Y + ++ + AT+EQL E RR+LL+V AVHA+SW+W S P A R K + L LP+LRR+A RR ++ L R+S +S Sbjct: 138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQT--SYVNIARDDDGLTALLWSFRGNKNKPCNPRI--TRRLVDAGADTTSAVQLR-AKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKKS 406 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1663.4480.1 >prot_L-elsbetiae_contig1663.4480.1 ID=prot_L-elsbetiae_contig1663.4480.1|Name=mRNA_L-elsbetiae_contig1663.4480.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=503bp MEAGADLEAADPEGVTPLYLAAQAGHSAVTIEAALSKGGTPLQLAAHNGHback to top mRNA from alignment at L-elsbetiae_contig1663:11338..14244- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1663.4480.1 ID=mRNA_L-elsbetiae_contig1663.4480.1|Name=mRNA_L-elsbetiae_contig1663.4480.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2907bp|location=Sequence derived from alignment at L-elsbetiae_contig1663:11338..14244- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1663:11338..14244- >mRNA_L-elsbetiae_contig1663.4480.1 ID=mRNA_L-elsbetiae_contig1663.4480.1|Name=mRNA_L-elsbetiae_contig1663.4480.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3018bp|location=Sequence derived from alignment at L-elsbetiae_contig1663:11338..14244- (Laminarionema elsbetiae ELsaHSoW15)back to top |