mRNA_L-elsbetiae_contig1658.4454.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1658.4454.1
Unique NamemRNA_L-elsbetiae_contig1658.4454.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1658.4454.1 vs. uniprot
Match: D7FJQ6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ6_ECTSI)

HSP 1 Score: 561 bits (1447), Expect = 6.520e-190
Identity = 332/555 (59.82%), Postives = 398/555 (71.71%), Query Frame = 1
Query:    1 GGGIPLSLRSHRNFRRFVFTVPEHGAPIPPWRCKRSVAPALLLGYLDLLTDLGTILSYRRSGLFPFFAIGLAFIVGQALCAGAFVLRQEAPWWRGAAAAAQLGLLVEAAISIKEESYSHALVALRVLEPLFEAMPMLLLQAYVLLVNREFLALRVVSVVASTLSLATASTAIVAEHPLSQIRWARGVDYPTARLSLPSSLFFGTVPYVGSVFVRMGFRMHPQDFVWWFLAYQVMEIASRVLSLVVVALSLGYYTFILLAWLWLSRTYIARVSIIGPVVKERLMFRKLIRFSAAPIMDSAIDRVRAYKVCSFLTCLETVTFLAVGNSVVTPDAEDALVSDLARRMFSVVAILFMGGKITLATAIVVPFKEKIGEIVPPVKGELRAREESAAAAANRSAVPTAPTTNVRGAPGGFGDGSGGP--PFPLEKELSIEDIMAVVGPSQADAA--GASGSGRLSMTGGAIRSNDDDGDVKGEPFSRG-FALQTVEEGG-AGQQAGGSCGDDDAD--DEGRTTCTPPGCKEGKYEEDELQTSAECTSFSGGDVKSENLAPSH 1641
            GGGIPLSLR+HRNFRRFVF VPEHGAPIPPWR KRS+ PAL+LGYLDL TDL T+LSY RSGL  +FAIG+AFI G ALCAGA+VLR++    RG AAA QLGL+VE  IS+KEESYSHALVALRVLEPLF+++PMLLLQ +VLLV+ E LALRVVSV+ STLSLA AST IVAEHPLSQ+RW+RGV YPTA+L L SS+FFGTVP+ GSV VRMGF++HPQDFVWWFL YQ+MEI SRVLSL V+A+ LGYY F LLAWLWLSRT+IA VSI   VV+E+L FRKLIRF+AAPIMDS IDRV+AYKV  F TC+ET  FLAVGN++  P A++   SDL RR+FSV+++L MGGKI L TA+VVPFK KI E +PP KGELR        +++  ++        R  PGG GDG+ GP  P P   ++S+E IMA V  +   AA     GSG + +  G   S+       G     G  A+Q VEE      ++GG            G+ T   PGCKEG   ED+++ S   ++   GD K E +APSH
Sbjct:  263 GGGIPLSLRNHRNFRRFVFAVPEHGAPIPPWRSKRSLIPALVLGYLDLFTDLATVLSYWRSGLTLWFAIGVAFITGPALCAGAYVLREKTVG-RGIAAATQLGLIVEGLISVKEESYSHALVALRVLEPLFQSLPMLLLQTHVLLVSEECLALRVVSVMVSTLSLAVASTGIVAEHPLSQLRWSRGVKYPTAKLPLASSMFFGTVPFAGSVCVRMGFQLHPQDFVWWFLLYQLMEIISRVLSLGVIAMPLGYYFFCLLAWLWLSRTFIACVSIGDSVVREKLRFRKLIRFAAAPIMDSVIDRVKAYKVSCFFTCVETACFLAVGNAL--PHADETRASDLTRRVFSVISLLAMGGKIALGTALVVPFKAKISENLPPAKGELRPLPGPPGESSSDDSI-----RKSRRNPGGLGDGTTGPALPSPGTADISMESIMAAVDTAAVVAAVPAGDGSGPVDVETGGGGSSRGXXSAGGSGTIAGTLAVQAVEEARWPAYESGGXXXXXXXXXTSAGKDTAASPGCKEG---EDDVRRSWAASASEEGDEKQEGVAPSH 806          
BLAST of mRNA_L-elsbetiae_contig1658.4454.1 vs. uniprot
Match: A0A6H5JIQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ5_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 4.710e-54
Identity = 150/377 (39.79%), Postives = 214/377 (56.76%), Query Frame = 1
Query:    4 GGIPLSLRSHRNFR--RFVFTVPEHGAPIPPWRCKRSVAPALLLGYLDLLTDLGTILSYRRSGLFPFFAIGLAFIVGQALCAGAFVLRQEAPWWRGAAAAAQLGLLVEAAISIKEESYSHALVALRVLEPLFEAMPMLLLQAYVLLVNRE-----FLALRVVSVVASTLSLATASTAIVAEHPLSQIRWARGVDYPTARLSLPSSLFFGTVPYVGSVFVRMGFRMHPQDFVWWFLAYQVMEIASRVLSLVVVALSLGYYTFILLAWLWLSRTYIARVSIIGPVVKERLMFRKLIRFSAAPIMDSAIDRVRAYKVCSFLTCLETVTFLAVGNSVVTPDAEDALVSDLARRMFSVVAILFMGGKITLATAIVVPFKEKI 1113
            G +P SL  H N +   F F V E GAP+P ++  +SV   L+LGY D+ TD+  ++SY ++    +FA+G+ FI+G AL A   +LR+E  W R    A QLG+L  A +S    SYS  L +LRV+EPL+E++P L+LQ Y LL+  +     +L+ R++S++ S  SLA A+T +VAE  LS++  A   D  +A     + L FG VP   SV V    R + Q FVW FL YQV+EI ++ +SL ++AL    Y F+ L WLW SR Y+ R  I G   +  L  R   R    P MDS +D ++ Y V   LT +E V  L +GN   T D    L +D+ R +++ VA + M GK+ L   IV PFK  +
Sbjct:   29 GEVPKSLLDHPNRKGGAFQFHVTEDGAPVPGYKSWKSVGIQLVLGYADVGTDVDAVVSYYQADHMWWFALGMIFIIGPALFAAIVLLRRE-HWLRRVLVALQLGMLFGALVSWGTSSYSPVLASLRVMEPLYESVPQLMLQLYGLLLEWDNDGTMWLSRRLLSILFSCFSLAYATTGLVAEQALSRL--APTADAASASCPGLTGLVFGAVPANSSVAVYRS-RWNSQKFVWAFLFYQVLEIGAKFISLGLLALVWRAYFFLALFWLWGSRAYVLRRLIAG---EHSLRVRSQFRLVGMPFMDSVMDVLQTYDVGCALTTVEFVFCLTIGNMFYT-DEGGQLPTDVGR-VWTYVAAVCMVGKLCLGYLIVRPFKRVV 396          
BLAST of mRNA_L-elsbetiae_contig1658.4454.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 2.180e-34
Identity = 129/382 (33.77%), Postives = 189/382 (49.48%), Query Frame = 1
Query:    4 GGIPLSLRSHRNFRRFVFTVPEHGAPIP----PWRCKRSVAPALLLGYLDLLTDLGTILSYRRSGLFPFFAIGLAFIVGQALCAGAFVLRQEAPWWRGAAAAAQLGLLVEAAISIKEESYSHALVALRVLEPLFEAMPMLLLQAYVLL-------VNREFLALRVVSVVASTLSLATASTAIVAEHPLSQIRWARGVDYPTARLS--LPS--SLFFGTVPYVGSVFVRMGFRMHPQDFVWWFLAYQVMEIASRVLSLVVVALSLGYYTFILLAWLWLSRTYIARVSIIGPVVKERLMFRKLIRFSAAPIMDSAIDRVRAYKVCSFLTCLETVTFLAVGNSVVTPDAEDALVSDLARRMFSVVAILFMGGKITLATAIVVPFK 1104
            G IPL ++    F +F+  +  +G P+P    P    + +   +LLGY DL +DL T +SY  +  F +F +GL F +G A+    F L     W+R    AAQL LL EA I++ +  YS  L  +RV+EPLFE++P LLLQ + +L            LA RVVSV  S  SLA A+T + +   LS      G D    RL    PS   L F  VP  G+  +R    +HP+  VW  L Y V+EI +R + L ++ L +  + F +L +LW+SR  +  ++      +E L FR  +R  A P +DS +D   A+ +   LT +E +  + V +     D         AR +   VA   M GK+ LA   + P K
Sbjct:  374 GPIPLEVQKLPRFGKFITGIALNGPPLPAVRGPLHAFKVLIVPVLLGYADLASDLYTAVSYYEARHFVWFGLGLVFALGPAVIMSLFCL-SGIGWFRRFLVAAQLSLLAEALITLTKADYSPVLALVRVIEPLFESVPQLLLQLHAMLWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDG--GKDGERFRLCPCFPSLTGLVFSRVPAQGTSSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLLLVVRGWFFFVLVYLWVSRALMVWMA-----AREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLGLTLVEFIVCMVVYHVYKHDDLPSR-----ARLVLVTVASCCMVGKMCLALVAISPLK 742          
BLAST of mRNA_L-elsbetiae_contig1658.4454.1 vs. uniprot
Match: A0A6H5JJ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 4.640e-34
Identity = 126/382 (32.98%), Postives = 191/382 (50.00%), Query Frame = 1
Query:    4 GGIPLSLRSHRNFRRFVFTVPEHGAPIP----PWRCKRSVAPALLLGYLDLLTDLGTILSYRRSGLFPFFAIGLAFIVGQALCAGAFVLRQEAPWWRGAAAAAQLGLLVEAAISIKEESYSHALVALRVLEPLFEAMPMLLLQAYVLL---VNREF----LALRVVSVVASTLSLATASTAIVAEHPLSQIRWARGVDYPTARLS--LPS--SLFFGTVPYVGSVFVRMGFRMHPQDFVWWFLAYQVMEIASRVLSLVVVALSLGYYTFILLAWLWLSRTYIARVSIIGPVVKERLMFRKLIRFSAAPIMDSAIDRVRAYKVCSFLTCLETVTFLAVGNSVVTPDAEDALVSDLARRMFSVVAILFMGGKITLATAIVVPFK 1104
            G IPL L+   +F +F+  +  +G P+P    P    + +   ++LGY DL +DL T +SY  +  F +F +GL F +G A+   AF L     W+R    A QL LL EA I++++  YS  L  +RV+ PLFE++P LLLQ + +L       F    LA RVVSV  S  SLA A+T + +   LS      G+D    RL    PS   + F  VP  G+  +R    +HP+  VW  L Y V+EI +R + L ++   +  + F +L +LW+ R  I  ++      +E L FR  +R  A P +DS +D   A+ +   LT +E +  + + +  +  D         AR +   VA   M GK+ LA   + P K
Sbjct:   27 GPIPLELQKLPHFGKFITGIALNGPPLPAVRDPLHAFKILIVPVILGYADLASDLYTAVSYYEAKHFVWFGLGLFFALGPAVIMSAFCL-SGVGWFRRFLVATQLSLLAEALITLQKADYSPVLALVRVIGPLFESVPQLLLQLHAMLWLWTETSFASSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDG--GMDGERFRLCPCFPSLTGVVFSRVPAEGTSSLRGVGDVHPRSHVWLCLVYHVLEIFARFVPLAMLVQVVRGWFFFVLVYLWVGRGLIVWMT-----AREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLVLTLVEFIVCMVIYHVYMNDDLPSR-----ARLVLVTVASCCMVGKMCLAWVAISPLK 395          
BLAST of mRNA_L-elsbetiae_contig1658.4454.1 vs. uniprot
Match: D8LFI4_ECTSI (Leucine Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.040e-33
Identity = 131/389 (33.68%), Postives = 193/389 (49.61%), Query Frame = 1
Query:    1 GGGIPLSLRSHRNFRRFVFTVPEHGAPIPPWRCKRSVAPALL----LGYLDLLTDLGTILSYRRSGLFPFFAIGLAFIVGQALCAGAFVLRQEAPWWRGAAAAAQLGLLVEAAISIKEESYSHALVALRVLEPLFEAMPMLLLQAYVLLV-------NREFLALRVVSVVASTLSLATASTAIVAEHPLSQIRWARGVDYPTARL--SLPS--SLFFGTVPYVG--SVFVRMGFRMHPQDFVWWFLAYQVMEIASRVLSLVVVALSLGYYTFILLAWLWLSRTYIARVSIIGPVVKERLMFRKLIRFSAAPIMDSAIDRVRAYKVCSFLTCLE----TVTFLAVGNSVVTPDAEDALVSDLARRMFSVVAILFMGGKITLATAIVVPFK 1104
            GG IP  L  H  F++F+      G P+P           L+    LGYLDL +DL T +SY  SG   +F + +AF +G A+   AF L  E    R    A QL LL+EA  S    +YS  L  +RV+EPLFE++P LLLQ Y +L+       +   L  RV+SV  ST+SLA A+T + +   L   R +        R+    PS  +L F  VP  G   +  RMG+ +HP+  VW+   Y V+EI SR + L ++AL L  + F++L +LW+SR  +   +      +  + FR  +R  A P +DS +D  RA+     LT +E     VT+    +  + P A         R   ++++I  M GK+ LA   ++P K
Sbjct:  157 GGEIPKRLAEHPRFKKFIVGRAMDGPPLPHVNDAGHAVKILIVPVALGYLDLASDLYTAVSYYNSGHLFWFVLVVAFALGPAVIVSAFFL-PEFTCGRRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERFRMCPDCPSVTALVFSRVPEKGVSRLAGRMGW-VHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYSG--EATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVEFVACIVTYHLFSSDHLPPHA---------RWTLTIISICCMVGKMRLALLAIIPLK 532          
BLAST of mRNA_L-elsbetiae_contig1658.4454.1 vs. uniprot
Match: A0A6H5K7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q2_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.070e-25
Identity = 118/391 (30.18%), Postives = 181/391 (46.29%), Query Frame = 1
Query:    1 GGGIPLSLRSHRNFRRFVFTVPEHGAPIPPWRCKRSVAPALL----LGYLDLLTDLGTILSYRRSGLFPFFAIGLAFIVGQALCAGAFVLRQEAPWWRGAAAAAQLGLLVEAAISIKEESYSHALVALRVLEPLFEAMPMLLLQAYVLLV-------NREFLALRVVSVVASTLSLATASTAIVAEHPLSQIRWARGVDYPTARLS----LPSSLFFGTVPYVG--SVFVRMGFRMHPQDFVWWFLAYQVMEIASRVLSLVVVALSLGYYTFILLAWLWLSRTYIARVSIIGPVVKERLMFRKLIRFSAAPIMDSAIDRVRAY------KVCSFLTCLETVTFLAVGNSVVTPDAEDALVSDLARRMFSVVAILFMGGKITLATAIVVPFK 1104
            GG IP  L  H  F++F+      G P+P           L+    LGYLDL +DL T  + + +  +  F  G  F+V                       A QL LL+EA  S    +YS  L  +RV+EPLFE++P LLLQ Y +L+       +   L  RV+SV  ST+SLA A+T + +   L   R +       +R+       + L F  VP  G   +  RMG+ +HP+  VW+   Y V+EI SR + L ++AL L  + F++L +LW+SR  +   +      +  + FR  +R  A P +DS +D  RA+       +  F+ C+ T    + G+           +   AR   +++AI  M GK+ LA   ++P K
Sbjct:   86 GGEIPKRLAEHPRFKKFIVGRAMDGPPLPHINDTGHAVKILIVPVALGYLDLTSDLYTPTTIQAT--YFEFTCGRRFLV-----------------------ATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERSRMCPDCPFITGLVFSRVPEKGVSRLAGRMGW-VHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYWG--EATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVKFVACIVTYHLFSSGH-----------LPPHARWTLTIIAICCMVGKMRLALLAILPLK 437          
BLAST of mRNA_L-elsbetiae_contig1658.4454.1 vs. uniprot
Match: A0A6H5KD04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD04_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 9.740e-21
Identity = 114/386 (29.53%), Postives = 184/386 (47.67%), Query Frame = 1
Query:    4 GGIPLSLRSHRNFRRFVFTVPEHGAPIPPWRCKRSVAPALLLGYLDLLTDLGTILSYRRSGLFPFFAIGLAFIVGQALCAGAF-----VLRQEAPWWRGAAAAAQLGLLVEAAISIKEESYSHALVALRVLEPLFEAMPMLLLQAYVLLV---NREFLALRVVSVVASTLSLATASTAIVAEHPLSQIRWA-RGVDYPTARLSLPSSLFFGTVPYVGSVFVRMGFRMHPQDFVWWFLAYQVMEIASRVLSLVVVALSLGYYTFILLAWLWLSRTYIARVSIIGPVVKER----------LMFRKLIRFSAAPIMDSAIDRVRAYKVCSFLTCLETVTFLAVGNSVVTPDAEDALVSDLARRMFSVVAILFMGGKITLATAIVVPFK 1104
            G IP  + + R F +F   V +  +   P     +V   +  GYLDL++DL T +SY  SG   +F + LAF +G  + A  F     ++R   PW R    A QL LLVEA  ++ +  ++  L  +R++E LFE++P LLLQ Y  L+   + E   LR+ SV  S  SLA  +T + +   L +      G   P    S  + L F  VP  GS  +     +HP+  VW  L Y ++EI SR + L ++AL +  + F++L +LW SR  + + +        R          +  R  ++  A P +DS +D   A+ +   +T +E +  + + +        D L ++L   ++ VVA   M GK+ LA   + P +
Sbjct:   34 GPIPTEVVNLRYFDKFNTGVLDAESSRLP---TGTVMLQVFFGYLDLVSDLYTAVSYYESGDSFWFTLVLAFALGPGIIASVFFLTPTIVRVRVPWVRRVLVATQLSLLVEAWRNVAKRRFTPILEVVRLIEALFESVPQLLLQLYAALLLWSSPERNVLRLGSVCISAGSLAYNATDLFSAKRLERCSDPLEGGICPCC--SWLTGLPFSRVPEKGSSRLNGWGDVHPRTHVWLCLLYHILEIVSRFVPLAMLALVMRKWFFLVLPYLWWSRYAVRKKAAAWTRKSTRETDKARPRKSVTERVRVKLVAMPFLDSVMDGSAAFGLGLVVTLVEFIVCVVIYHLY----NHDDLPTNLRLGLY-VVASSCMVGKLLLAALAIFPLR 409          
BLAST of mRNA_L-elsbetiae_contig1658.4454.1 vs. uniprot
Match: A0A6H5JL60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL60_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.030e-19
Identity = 100/309 (32.36%), Postives = 148/309 (47.90%), Query Frame = 1
Query:  211 LAFIVGQALCAGAFVLRQEAPWWRGAAAAAQLGLLVEAAISIKEESYSHALVALRVLEPLFEAMPMLLLQAYVLL-------VNREFLALRVVSVVASTLSLATASTAIVAEHPLSQIRWARGVDYPTARL----SLPSSLFFGTVPYVGSVFVRMGFRMHPQDFVWWFLAYQVMEIASRVLSLVVVALSLGYYTFILLAWLWLSRTYIARVSIIGPVVKERLMFRKLIRFSAAPIMDSAIDRVRAYKVCSFLTCLETVTFLAVGNSVVTPDAEDALVSDLARRMFSVVAILFMGGKITLATAIVVPFK 1104
            L F +G A+    FVL    P+ R    A QL LL EA  ++  + YS  L  +RV+EPLFE++P LLLQ Y +L        +   LA R VSV  S  SLA A+T + +   L  +    G D    RL    S  + L F  VP  G+  ++    +HP+  VW    Y V+EI +R + L ++ L +  +  ++L +LW+SR  + RV+      +E L FR  +R  A P +DS +D   A+     LT +E +  + + +     D         AR +   VA   M GK+ LA   + P K
Sbjct:   13 LFFALGPAVIVALFVLSGVGPF-RRFLVATQLSLLAEAWNTVGGQVYSPVLALVRVVEPLFESVPQLLLQLYAMLRLWPETSSSSSRLAWREVSVCISVASLAYAATDVSSVERL--LTCGGGSDCERFRLGPCCSSLTGLVFSRVPAQGTSSLKGVGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVRGWFLLVLVYLWVSRVLMVRVT------REGLDFRFGVRLVAMPFLDSIMDETTAFGTGLVLTLVEFILCVVIYHVYKHDDLPSG-----ARLVLVTVASCCMVGKMCLAWVTISPLK 307          
BLAST of mRNA_L-elsbetiae_contig1658.4454.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 7.670e-11
Identity = 95/342 (27.78%), Postives = 145/342 (42.40%), Query Frame = 1
Query:   73 GAPIPPWR----CKRSVAPALLLGYLDLLTDLGTILSYRRSGLFPFFAIGLAFIVGQALCAGAFVLRQEAPWWRGAAAAAQLGLLVEAAISIKEESYSHALVALRVLEPLFEAMPMLLLQAYVLLVNREFLALRVVSVVASTLSLATASTAIVAEHPLSQIRWARGVDYPTARLSLPSSLFFGTVPYVGSVFVRMGFRMHPQDFVWW--FLAYQVMEIASRVLSLVVVALSLGYYTFILLAWLWLSRTYIARVSIIGPVVKERLMFRKLIRFSAAPIMDSAIDRVRAYKVCSFLTCLETVTFLAVGNSVVTPDAEDALVSDLARRMFSVVAILFMGGKITLA 1080
            G P+P        K+ +   + LGY DL++D+ T + Y R     +  +GLAF +G AL    F L     W+R    A  L L+ EA  ++ +E YS  L  +RV+EPLFE++P LLLQ Y +L+                       T  +  H     R                         VGSV + +    +    V    FLA Q  E+ S  +SL +    +  ++ ++L +LW+SR  I  +       K  L FR  +R  A P  DS +D    ++     T LE +  LA+ ++     A+D L S  ARR  ++V    M G  T++
Sbjct:   47 GPPLPQVEDDDHAKKILVLPVSLGYPDLVSDIFTAVFYFRGDHPVWGGLGLAFALGPALITSIFFL-SGFQWYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLILW---------------------TETMLSHGRLVWRXXXXXXXXXXXXXXXXXXXXXXXXXVGSVCISVASLAYAATDVSSVEFLATQTGEV-SYFVSLAMFFTVIRKWSSLVLLYLWMSRGVIVXIW----ASKTSLDFRFRVRLVAMPFTDSIVDGAVVFRGALVWTLLEFMLCLALYHAY----AQDDL-SASARRALTIVVCSCMVGLQTIS 356          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1658.4454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FJQ6_ECTSI6.520e-19059.82Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A6H5JIQ5_9PHAE4.710e-5439.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBY3_ECTSI2.180e-3433.77Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JJ93_9PHAE4.640e-3432.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFI4_ECTSI1.040e-3333.68Leucine Rich Repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5K7Q2_9PHAE2.070e-2530.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD04_9PHAE9.740e-2129.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL60_9PHAE1.030e-1932.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6W6_9PHAE7.670e-1127.78HTH psq-type domain-containing protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1658contigL-elsbetiae_contig1658:20827..24116 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score567.8
Seed ortholog evalue5.6e-159
Seed eggNOG ortholog2880.D7FJQ6
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.regulation of response to stimulus
EggNOG OGs2R960@2759,COG4886@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-06_010590.1
Exons5
Model size1653
Cds size1653
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1658.4454.1prot_L-elsbetiae_contig1658.4454.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1658 20827..24116 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815687.890336-CDS-L-elsbetiae_contig1658:20826..211401622815687.890336-CDS-L-elsbetiae_contig1658:20826..21140Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1658 20827..21140 -
1691683038.6015823-CDS-L-elsbetiae_contig1658:20826..211401691683038.6015823-CDS-L-elsbetiae_contig1658:20826..21140Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1658 20827..21140 -
1622815687.901281-CDS-L-elsbetiae_contig1658:21257..215581622815687.901281-CDS-L-elsbetiae_contig1658:21257..21558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1658 21258..21558 -
1691683038.613335-CDS-L-elsbetiae_contig1658:21257..215581691683038.613335-CDS-L-elsbetiae_contig1658:21257..21558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1658 21258..21558 -
1622815687.9131334-CDS-L-elsbetiae_contig1658:21980..223221622815687.9131334-CDS-L-elsbetiae_contig1658:21980..22322Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1658 21981..22322 -
1691683038.6219568-CDS-L-elsbetiae_contig1658:21980..223221691683038.6219568-CDS-L-elsbetiae_contig1658:21980..22322Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1658 21981..22322 -
1622815687.9284675-CDS-L-elsbetiae_contig1658:22787..229381622815687.9284675-CDS-L-elsbetiae_contig1658:22787..22938Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1658 22788..22938 -
1691683038.6304383-CDS-L-elsbetiae_contig1658:22787..229381691683038.6304383-CDS-L-elsbetiae_contig1658:22787..22938Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1658 22788..22938 -
1622815687.940458-CDS-L-elsbetiae_contig1658:23571..241161622815687.940458-CDS-L-elsbetiae_contig1658:23571..24116Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1658 23572..24116 -
1691683038.6384807-CDS-L-elsbetiae_contig1658:23571..241161691683038.6384807-CDS-L-elsbetiae_contig1658:23571..24116Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1658 23572..24116 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1658.4454.1

>prot_L-elsbetiae_contig1658.4454.1 ID=prot_L-elsbetiae_contig1658.4454.1|Name=mRNA_L-elsbetiae_contig1658.4454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=551bp
GGGIPLSLRSHRNFRRFVFTVPEHGAPIPPWRCKRSVAPALLLGYLDLLT
DLGTILSYRRSGLFPFFAIGLAFIVGQALCAGAFVLRQEAPWWRGAAAAA
QLGLLVEAAISIKEESYSHALVALRVLEPLFEAMPMLLLQAYVLLVNREF
LALRVVSVVASTLSLATASTAIVAEHPLSQIRWARGVDYPTARLSLPSSL
FFGTVPYVGSVFVRMGFRMHPQDFVWWFLAYQVMEIASRVLSLVVVALSL
GYYTFILLAWLWLSRTYIARVSIIGPVVKERLMFRKLIRFSAAPIMDSAI
DRVRAYKVCSFLTCLETVTFLAVGNSVVTPDAEDALVSDLARRMFSVVAI
LFMGGKITLATAIVVPFKEKIGEIVPPVKGELRAREESAAAAANRSAVPT
APTTNVRGAPGGFGDGSGGPPFPLEKELSIEDIMAVVGPSQADAAGASGS
GRLSMTGGAIRSNDDDGDVKGEPFSRGFALQTVEEGGAGQQAGGSCGDDD
ADDEGRTTCTPPGCKEGKYEEDELQTSAECTSFSGGDVKSENLAPSHGGL
*
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mRNA from alignment at L-elsbetiae_contig1658:20827..24116-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1658.4454.1 ID=mRNA_L-elsbetiae_contig1658.4454.1|Name=mRNA_L-elsbetiae_contig1658.4454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3290bp|location=Sequence derived from alignment at L-elsbetiae_contig1658:20827..24116- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGAGGCATCCCCCTGTCCCTGCGGAGCCACCGCAACTTCCGCCGCTT CGTCTTTACGGTGCCAGAGCACGGGGCCCCCATCCCCCCCTGGAGGTGCA AGCGCTCCGTCGCCCCCGCCCTGCTGCTGGGGTACCTGGACCTCCTGACG GACCTCGGGACCATCCTTTCCTACCGGAGGTCTGGCCTGTTCCCGTTCTT CGCGATCGGTCTGGCGTTCATCGTCGGGCAGGCTCTGTGCGCCGGCGCGT TCGTGCTGCGGCAGGAGGCCCCGTGGTGGAGGGGCGCCGCGGCGGCCGCC CAGCTGGGACTGCTCGTCGAGGCGGCCATCTCCATCAAGGAGGAGTCGTA CTCGCACGCCCTCGTGGCGCTGAGGGTGCTGGAGCCGCTCTTTGAGGCGA TGCCGATGCTGCTGCTGCAGGCGTACGTCCTTCTGGTGAACCGGGAGTTC TTGGCCCTGAGAGTCGTGTCGGTGGTGGCGTCCACGCTGTCGCTGGCGAC GGCCAGCACGGCGATCGTGGCGGAGCACCCGCTTTCGCAGATTCGGTGAG GGTGTGCTGCCGCCTTTTTGTATTTTATGTCGTGTGCGCATGGAGTTGTG CGGTGAGCGGTGTGCGGTGCCATTCCGTGCGACTGCGACTTGACGTTGGG TTGCGACTGACTTAATGTTGTGATGTAATGTCGTGCCCGTGTGTGTGTGT GTTGAGCTGCTGTTGGTGTATGGTGGAACATGGCGTGGTGGGGTGCAATG TATAAGTATGTGTCCCTTTCGCAGCAGAGATTACGGACGCAGCAAGAACC TTACAGAGAGACCGCGTTTCACGTGGGGGTTGTAGCGGCTCCGTGGAGAA AAGGGAGGGGGGCAGTTCCTCACTTGGGCTCTTTAGTTCAGGGCAATGTG TTTAGAAGCATATTTTAAACTCACTGCCAGTTCATTTTTATATTTTTATC TCACCAATCGAGATAGGCCGCCGCCGCCATCAGTGCTCGCAAGACTTTTC CCGTCCCGATTGGTCGTTTTCTCCTGCTCAACGTCTCACAAGCTCCCCCT ACAATACGGACCTCTGTTCCTGCTTGACGCCTCACTAAACCCGCGCTCCT CCTTGACCTCGAACCCCCACACCACTCGACCACACCATCAACCACGCCGA ACGAAATCCGAACTGACGAAAATACAAGGTGGGCGAGGGGGGTCGACTAC CCCACCGCGAGGCTCTCGCTGCCCTCGTCTCTCTTCTTCGGAACGGTTCC CTACGTCGGCAGCGTGTTCGTCCGCATGGGGTTCCGCATGCACCCGCAGG ACTTCGTGTGGTGGTTTCTGGCCTACCAGGTGGGGGGTTCACCCGTCGTC CCTCTGGATGAAGAAGGCGCACAAACGAACGGCGTTGGTGTAGGTAGTTG TCGTATCTACATGAATCTCTTTGTCATTCATGTTGAGACTCTTATGTATT TTGATCGGTCATGGGACCCTGCGAGAGGAGGCCCTGCGTGATGTGGTCAT AGTAGGTCCTGCACGTTCGAAGTTCAGAACCAGATAAAACCCGGCTTTTC GGTCGTCTCACCACAGGGTACCGTACACCGCCGTGTTTTCTCACCAACGC TGCTGCCCCTTTGTCATGAATAATCTTGAACAAGGAAAAGAGAGCCACAA GCGGGCAGCAGGGGAAAACGGTCTTCTACTTACTTTTCGAATCCACCGGT TTTTGATCTCTCAAGTAGAAAAGGGGCAATCTATGTACACAGATGAAACG TATCTATCCCCCGATCGCCGTAACCCACCCCCCGCGGGCGCTAGGTGATG GAGATCGCTAGCAGAGTATTGTCCCTTGTGGTGGTCGCTCTCTCCCTGGG CTACTACACCTTCATCCTCCTGGCGTGGCTGTGGCTCTCCAGGACGTATA TCGCCCGCGTGTCCATCATCGGGCCCGTCGTGAAGGAGAGGCTGATGTTT CGGAAGCTGATTCGCTTCTCGGCCGCCCCGATCATGGACTCCGCTATCGA CCGGGTCAGGGCGTACAAGGTGTGCAGCTTCCTCACCTGCCTGGAGACGG TGACATTTCTGGCTGTGGGGAACTCGGTGGTGACGCCCGACGCCGAGGAT GCGCTCGTTTCCGATCTGGCGCGGCGGATGTTTTCGGTGAGATGCGAGAG AGAGAGAGAGAGAGAGAGAGAGAGATAATGGAATGCACGTTTTGCGTTAG AATATTCGTGGAACGTGTGTTGTGAGAGACCTGTATAGATAGGCTATGCA TGCGCTTGTCGCTGTGTTGATAATTTTGTTGTTGCTCTGTGTTTTTTTTT CTTCGTTTTTTTTGTCGACGAGAACCACTAGCCAACTTCGAAGACATGTG CGTGCGACGAAGCCATGTTTTGTTTTTGCTCGCTTTACTTTTCCGTATGT TGACTTTGCCCTCTTTCCGTGTACTTGGATGGTGCGTTTTCAGGCCATGC ATGTCTCGGCGCGGTGTGTCTTTACCGCTCCGTGTACATGGATAGCTTGT CTGATCCGACCCTGAAGTGTGTGTCGCCTCTGTGTGCCCCCCTTTGCCGC CTTGCCAGGTGGTGGCCATCCTCTTCATGGGTGGCAAAATCACCCTGGCC ACCGCGATCGTGGTCCCCTTCAAGGAAAAAATCGGCGAGATCGTGCCCCC CGTGAAGGGCGAGCTCAGGGCACGAGAAGAATCTGCCGCCGCCGCCGCCA ACCGTAGCGCCGTCCCCACCGCTCCCACGACAAATGTTCGCGGCGCCCCC GGCGGTTTCGGCGACGGGAGCGGCGGGCCCCCCTTCCCTCTGGAGAAGGA GCTCAGCATCGAAGATATCATGGCTGTTGTCGGCCCTAGTCAAGCGGACG CTGCTGGCGGTGGCGGCGACGGCGGGACCGACCTGGAAAGCGGATGCGAG GCGCGCGCCGCCCCCCGGAGCAAAACCGGGGGGCCCGCAGATTCGCAGGA GGGCGAAGAGGGCGCGGCGCGGCGAGCCAGCGGGAGCGGAAGGCTCTCGA TGACCGGCGGCGCCATCCGCAGCAACGACGACGACGGCGACGTCAAAGGA GAGCCCTTTTCGAGGGGGTTCGCTCTGCAGACAGTCGAGGAGGGGGGGGC GGGGCAGCAGGCCGGAGGTTCGTGTGGCGATGATGATGCTGATGATGAAG GTCGAACTACATGTACCCCCCCCGGCTGCAAAGAGGGCAAGTACGAGGAG GACGAGCTGCAGACTTCCGCCGAGTGTACTTCCTTCTCGGGGGGCGACGT GAAATCGGAGAATTTGGCGCCGTCTCACGGAGGGTTGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1658:20827..24116-

>mRNA_L-elsbetiae_contig1658.4454.1 ID=mRNA_L-elsbetiae_contig1658.4454.1|Name=mRNA_L-elsbetiae_contig1658.4454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3306bp|location=Sequence derived from alignment at L-elsbetiae_contig1658:20827..24116- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGAGGCATCCCCCTGTCCCTGCGGAGCCACCGCAACTTCCGCCGCTT
CGTCTTTACGGTGCCAGAGCACGGGGCCCCCATCCCCCCCTGGAGGTGCA
AGCGCTCCGTCGCCCCCGCCCTGCTGCTGGGGTACCTGGACCTCCTGACG
GACCTCGGGACCATCCTTTCCTACCGGAGGTCTGGCCTGTTCCCGTTCTT
CGCGATCGGTCTGGCGTTCATCGTCGGGCAGGCTCTGTGCGCCGGCGCGT
TCGTGCTGCGGCAGGAGGCCCCGTGGTGGAGGGGCGCCGCGGCGGCCGCC
CAGCTGGGACTGCTCGTCGAGGCGGCCATCTCCATCAAGGAGGAGTCGTA
CTCGCACGCCCTCGTGGCGCTGAGGGTGCTGGAGCCGCTCTTTGAGGCGA
TGCCGATGCTGCTGCTGCAGGCGTACGTCCTTCTGGTGAACCGGGAGTTC
TTGGCCCTGAGAGTCGTGTCGGTGGTGGCGTCCACGCTGTCGCTGGCGAC
GGCCAGCACGGCGATCGTGGCGGAGCACCCGCTTTCGCAGATTCGGGCGG
AGGCATCCCCCTGTCCCTGCGGAGCCACCGCAACTTCCGCCGCTTCGTCT
TTACGGTGCCAGAGCACGGGGCCCCCATCCCCCCCTGGAGGTGCAAGCGC
TCCGTCGCCCCCGCCCTGCTGCTGGGGTACCTGGACCTCCTGACGGACCT
CGGGACCATCCTTTCCTACCGGAGGTCTGGCCTGTTCCCGTTCTTCGCGA
TCGGTCTGGCGTTCATCGTCGGGCAGGCTCTGTGCGCCGGCGCGTTCGTG
CTGCGGCAGGAGGCCCCGTGGTGGAGGGGCGCCGCGGCGGCCGCCCAGCT
GGGACTGCTCGTCGAGGCGGCCATCTCCATCAAGGAGGAGTCGTACTCGC
ACGCCCTCGTGGCGCTGAGGGTGCTGGAGCCGCTCTTTGAGGCGATGCCG
ATGCTGCTGCTGCAGGCGTACGTCCTTCTGGTGAACCGGGAGTTCTTGGC
CCTGAGAGTCGTGTCGGTGGTGGCGTCCACGCTGTCGCTGGCGACGGCCA
GCACGGCGATCGTGGCGGAGCACCCGCTTTCGCAGATTCGGTGGGCGAGG
GGGGTCGACTACCCCACCGCGAGGCTCTCGCTGCCCTCGTCTCTCTTCTT
CGGAACGGTTCCCTACGTCGGCAGCGTGTTCGTCCGCATGGGGTTCCGCA
TGCACCCGCAGGACTTCGTGTGGTGGTTTCTGGCCTACCAGGTGGGCGAG
GGGGGTCGACTACCCCACCGCGAGGCTCTCGCTGCCCTCGTCTCTCTTCT
TCGGAACGGTTCCCTACGTCGGCAGCGTGTTCGTCCGCATGGGGTTCCGC
ATGCACCCGCAGGACTTCGTGTGGTGGTTTCTGGCCTACCAGGTGATGGA
GATCGCTAGCAGAGTATTGTCCCTTGTGGTGGTCGCTCTCTCCCTGGGCT
ACTACACCTTCATCCTCCTGGCGTGGCTGTGGCTCTCCAGGACGTATATC
GCCCGCGTGTCCATCATCGGGCCCGTCGTGAAGGAGAGGCTGATGTTTCG
GAAGCTGATTCGCTTCTCGGCCGCCCCGATCATGGACTCCGCTATCGACC
GGGTCAGGGCGTACAAGGTGTGCAGCTTCCTCACCTGCCTGGAGACGGTG
ACATTTCTGGCTGTGGGGAACTCGGTGGTGACGCCCGACGCCGAGGATGC
GCTCGTTTCCGATCTGGCGCGGCGGATGTTTTCGGTGATGGAGATCGCTA
GCAGAGTATTGTCCCTTGTGGTGGTCGCTCTCTCCCTGGGCTACTACACC
TTCATCCTCCTGGCGTGGCTGTGGCTCTCCAGGACGTATATCGCCCGCGT
GTCCATCATCGGGCCCGTCGTGAAGGAGAGGCTGATGTTTCGGAAGCTGA
TTCGCTTCTCGGCCGCCCCGATCATGGACTCCGCTATCGACCGGGTCAGG
GCGTACAAGGTGTGCAGCTTCCTCACCTGCCTGGAGACGGTGACATTTCT
GGCTGTGGGGAACTCGGTGGTGACGCCCGACGCCGAGGATGCGCTCGTTT
CCGATCTGGCGCGGCGGATGTTTTCGGTGGTGGCCATCCTCTTCATGGGT
GGCAAAATCACCCTGGCCACCGCGATCGTGGTCCCCTTCAAGGAAAAAAT
CGGCGAGATCGTGCCCCCCGTGAAGGGCGAGCTCAGGGCACGAGAAGAAT
CTGCCGCCGCCGCCGCCAACCGTAGCGCCGTCCCCACCGCTCCCACGACA
AATGTTCGCGGCGCCCCCGGCGGTTTCGGCGACGGGAGCGGCGGGCCCCC
CTTCCCTCTGGAGAAGGAGCTCAGCATCGAAGATATCATGGCTGTTGTCG
GCCCTAGTCAAGCGGACGCTGCTGGCGGTGGTGGCCATCCTCTTCATGGG
TGGCAAAATCACCCTGGCCACCGCGATCGTGGTCCCCTTCAAGGAAAAAA
TCGGCGAGATCGTGCCCCCCGTGAAGGGCGAGCTCAGGGCACGAGAAGAA
TCTGCCGCCGCCGCCGCCAACCGTAGCGCCGTCCCCACCGCTCCCACGAC
AAATGTTCGCGGCGCCCCCGGCGGTTTCGGCGACGGGAGCGGCGGGCCCC
CCTTCCCTCTGGAGAAGGAGCTCAGCATCGAAGATATCATGGCTGTTGTC
GGCCCTAGTCAAGCGGACGCTGCTGGCGCCAGCGGGAGCGGAAGGCTCTC
GATGACCGGCGGCGCCATCCGCAGCAACGACGACGACGGCGACGTCAAAG
GAGAGCCCTTTTCGAGGGGGTTCGCTCTGCAGACAGTCGAGGAGGGGGGG
GCGGGGCAGCAGGCCGGAGGTTCGTGTGGCGATGATGATGCTGATGATGA
AGGTCGAACTACATGTACCCCCCCCGGCTGCAAAGAGGGCAAGTACGAGG
AGGACGAGCTGCAGACTTCCGCCGAGTGTACTTCCTTCTCGGGGGGCGAC
GTGAAATCGGAGAATTTGGCGCCGTCTCACGGAGGGTTGTAGCCAGCGGG
AGCGGAAGGCTCTCGATGACCGGCGGCGCCATCCGCAGCAACGACGACGA
CGGCGACGTCAAAGGAGAGCCCTTTTCGAGGGGGTTCGCTCTGCAGACAG
TCGAGGAGGGGGGGGCGGGGCAGCAGGCCGGAGGTTCGTGTGGCGATGAT
GATGCTGATGATGAAGGTCGAACTACATGTACCCCCCCCGGCTGCAAAGA
GGGCAAGTACGAGGAGGACGAGCTGCAGACTTCCGCCGAGTGTACTTCCT
TCTCGGGGGGCGACGTGAAATCGGAGAATTTGGCGCCGTCTCACGGAGGG
TTGTAG
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