mRNA_L-elsbetiae_contig16533.4427.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Match: A0A6H5JQQ6_9PHAE (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ6_9PHAE) HSP 1 Score: 164 bits (415), Expect = 1.970e-46 Identity = 83/106 (78.30%), Postives = 91/106 (85.85%), Query Frame = 1 Query: 199 AKTTPAVSPEALGLQKQLRKLCADKSEPDREARIEQLAEELNGLNPTKDPAFSPLLAGRWRMIYSTVPGPSSGRLGPFVGDVLQDIRPDEKKIDNILELGPSWALR 516 A+ AV A LQ +LR+LCA KSEP REARIE++A+ELN LNPTKDPA SPLLAGRWRM+YSTVPGPSSGRLGPFVGDV QDIRPDEK+I NILELGPSWALR Sbjct: 71 AEAALAVPEVASVLQDELRRLCATKSEPGREARIEEVAKELNALNPTKDPARSPLLAGRWRMLYSTVPGPSSGRLGPFVGDVFQDIRPDEKRIINILELGPSWALR 176
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Match: A0A7S2XYV4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYV4_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 7.920e-20 Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 235 GLQKQLRKLCADK-----SEPDREARIEQLAEELNGLNPTKDPAFSPLLAGRWRMIYSTVPGPSSGRLGPFVGDVLQDIRPDEKKIDNILELGPSWALR 516 GL+ +L+++CA + + I +A+ELN LN K PA S +L G+WR++YS VPGPSSG++GP DV QD+ + ++ NILELGP WALR Sbjct: 46 GLKTELKQICASTPNGVGASKQAKQTINSIAQELNKLNKIKTPAKSKILRGKWRLLYSDVPGPSSGKIGPVQADVFQDLDLENMRVKNILELGPDWALR 144
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Match: D8LLB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB5_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 8.200e-19 Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 1 Query: 382 MIYSTVPGPSSGRLGPFVGDVLQDIRPDEKKIDNILELGPSWALR 516 M+YSTVPGPSSGRLGPFVGDV QDIRPDEK+I NILELGPSWALR Sbjct: 1 MLYSTVPGPSSGRLGPFVGDVFQDIRPDEKRIINILELGPSWALR 45
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Match: L1J7Z3_GUITC (PAP_fibrillin domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J7Z3_GUITC) HSP 1 Score: 81.6 bits (200), Expect = 2.700e-15 Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 1 Query: 298 IEQLAEELNGLNPTKDPAFSPLLAGRWRMIYSTVPGPSSGRLGPFVGDVLQDIRPDEKKIDNILELG 498 +++ A EL LNPT+ A SP+L G+WR+++ST GPSSG LGPFVGDV QDI +++K NILELG Sbjct: 28 VKEKATELAKLNPTQRQATSPMLDGKWRLVFSTTKGPSSGMLGPFVGDVFQDIVLEQEKYFNILELG 94
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Match: A0A7S0NAH0_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0NAH0_9CHLO) HSP 1 Score: 82.4 bits (202), Expect = 3.590e-15 Identity = 42/100 (42.00%), Postives = 66/100 (66.00%), Query Frame = 1 Query: 208 TPAVSPEALGLQKQLRKLCADK--SEPDREARIEQLAEELNGLNPTKDPAFSPLLAGRWRMIYSTV-PGPSSGRLGPFVGDVLQDIRPDEKKIDNILELG 498 T + + + L ++L K+ + + PD ++RI ++ + NPT+ PA SPL+ G WRM+Y+ + P PSSG+LGPFVGDV QD+RP+ I N+L++G Sbjct: 56 TTNIESQKVALYEELEKVAPNGLIATPDDKSRIAEIVSAIEQSNPTEAPAQSPLMPGFWRMLYTDMEPAPSSGKLGPFVGDVFQDLRPENSLILNLLKVG 155
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Match: A0A7S4PIN3_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PIN3_GUITH) HSP 1 Score: 81.6 bits (200), Expect = 6.790e-15 Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 1 Query: 298 IEQLAEELNGLNPTKDPAFSPLLAGRWRMIYSTVPGPSSGRLGPFVGDVLQDIRPDEKKIDNILELG 498 +++ A EL LNPT+ A SP+L G+WR+++ST GPSSG LGPFVGDV QDI +++K NILELG Sbjct: 78 VKEKATELAKLNPTQRQATSPMLDGKWRLVFSTTKGPSSGMLGPFVGDVFQDIVLEQEKYFNILELG 144
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Match: A0A7S4G2T5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G2T5_9EUGL) HSP 1 Score: 80.9 bits (198), Expect = 4.870e-14 Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 280 PDREARIEQLAEELNGLNPTKDPAFSPLLAGRWRMIYSTV-PGPSSGRLGPFVGDVLQDIRPDEKKIDNILEL 495 P + RI L ++ LNPT P+ SPL+AG WRM+Y+ + P PSSG+LGPFVGDV QD++P++ +I N+L++ Sbjct: 202 PAEQRRIADLVAQIEALNPTPKPSRSPLMAGFWRMLYTDMEPAPSSGKLGPFVGDVFQDLQPEKDRIVNLLKV 274
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Match: A0A7S4DWF7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DWF7_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 7.350e-10 Identity = 30/72 (41.67%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 280 PDREARIEQLAEELNGLNPTKDPAFSPLLAGRWRMIYSTVPGPSSGRLGPFVGDVLQDIRPDEKKIDNILEL 495 P R I +L +EL NPT+ SPL++G W+++Y+T G S+G++GPFVGDV+Q++ + + NI+ L Sbjct: 99 PARREEIAELLQELEAANPTRKLTSSPLISGSWKLLYTTNDGSSAGKIGPFVGDVVQNVELQDGEYVNIVSL 170
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Match: A0A0G4E8H9_VITBC (PAP_fibrillin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4E8H9_VITBC) HSP 1 Score: 67.0 bits (162), Expect = 1.330e-9 Identity = 52/184 (28.26%), Postives = 82/184 (44.57%), Query Frame = 1 Query: 1 RHVCVRLCHLPFLAPKRMKCVGAVGVSLGAVFTLLNSGTLAFSTSTAFSSCRSVVGCKGARWGMPFAKTTPAVSPEALGLQKQLRKLCADKSE-----PDREARIEQLAEELNGLNPTKDPAFSPLLAGRWRMIYSTVPGPSSGRLGPFVGDVLQDIRPDEKKIDNILELGPSWALRVRAFSLL 537 +H+ LCH+ P + ++L AV S S+S S R + R S +A L++++ ++ K P +I L ++L +P K A S L G WR++Y+T PG S+G+LGPFVGDV Q I D N +++GP A ++ +L Sbjct: 2 KHLFADLCHMLIFLP-------LISLALSAVCDAFRSPASPLSSSPTLS--RPLSRRTARRLSPQMLTNIFKPSVDAASLKREIGRIAKGKDNGIKVTPAEREKILSLVKQLESSSPIKAAAQSKRLNGLWRLVYTTTPGSSAGKLGPFVGDVTQMIDMDSDVYINYVDIGPVQAFLEASWDVL 176
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Match: A0A7S1IL70_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IL70_9EUGL) HSP 1 Score: 63.5 bits (153), Expect = 5.930e-9 Identity = 29/69 (42.03%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 292 ARIEQLAEELNGLNPTKDPAFSPLLAGRWRMIYSTVPGPSSGRLGPFVGDVLQDIRPDEKKIDNILELG 498 A I L +L LNP + A S + G W+++Y++ G S+G+LGPFVGDV Q++R + K +N++ LG Sbjct: 12 AAIADLVAKLEALNPEANIATSTGMTGDWKLVYTSNQGSSAGKLGPFVGDVFQNVRYENGKYENVVRLG 80 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16533.4427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16533.4427.1 >prot_L-elsbetiae_contig16533.4427.1 ID=prot_L-elsbetiae_contig16533.4427.1|Name=mRNA_L-elsbetiae_contig16533.4427.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp MKCVGAVGVSLGAVFTLLNSGTLAFSTSTAFSSCRSVVGCKGARWGMPFAback to top mRNA from alignment at L-elsbetiae_contig16533:1603..3657+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16533.4427.1 ID=mRNA_L-elsbetiae_contig16533.4427.1|Name=mRNA_L-elsbetiae_contig16533.4427.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2055bp|location=Sequence derived from alignment at L-elsbetiae_contig16533:1603..3657+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16533:1603..3657+ >mRNA_L-elsbetiae_contig16533.4427.1 ID=mRNA_L-elsbetiae_contig16533.4427.1|Name=mRNA_L-elsbetiae_contig16533.4427.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1068bp|location=Sequence derived from alignment at L-elsbetiae_contig16533:1603..3657+ (Laminarionema elsbetiae ELsaHSoW15)back to top |