mRNA_L-elsbetiae_contig16523.4422.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16523.4422.1
Unique NamemRNA_L-elsbetiae_contig16523.4422.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 426 bits (1096), Expect = 2.930e-144
Identity = 206/341 (60.41%), Postives = 246/341 (72.14%), Query Frame = 1
Query:  253 RRSYDRPDYWGSVWGGWLRRLEELEAGEGGLDPSCREAVQFKGAFRVPYSLFLMIMESVSSIFPDVSRDVAGRECPPVELKVLGTLKVLASGCCFQDVATCTLMSRTTAENSFHNFCEKFSEGLWDKWVKLPTGDDLLKVEEAYRKCGYPGAVGSLDCTHFAW-TCPFSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKSVWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHKIPLLVPPFKNPLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKIDNAWFTACILHNMLHALDGLGDLEEDAD 1272
            R + +RPDY  S WG  L  LE L    G L PS REA  F+  FRVP+  F   ++ V ++FP  +RDVAGR+C P+ELKVLG L+VL  G CF DVA  +LMSR TAE SFH FC+ FS GLW +WV LP G+ L KV   Y   G PGAV S+DCTH +W  CPFSE N HKGKEG+TT+V EA CDHSGRI+++TK +PGAENDKTVVKRD SV R+R+EEPW S KF L+      TEH G WLIVDGGYH++P L+ PFK   +  + +WS+R ESIRKDIEC FGR+KGR+R FK  ILF +REKIDNAWFTACI+HNMLH  DGL +LE+D D
Sbjct:   33 RETRERPDYSSSAWGVRLANLESLRIA-GRLVPSSREAKAFRSDFRVPHEFFRHFVDLVRTVFPTATRDVAGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVD 372          
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 1.340e-141
Identity = 223/419 (53.22%), Postives = 266/419 (63.48%), Query Frame = 1
Query:   37 HTPHXXXIDMGESAMAMDMDDEAVMAAGAAAVATLQNMQSIMLGVATDGDD------VAQELAFEEDTGAEEEKPKRIRRSYDRPDYWGSVWGGWLRRLEELEAGEGGLDPSCREAVQFKGAFRVPYSLFLMIMESVSSIFPDVSRDVAGRECPPVELKVLGTLKVLASGCCFQDVATCTLMSRTTAENSFHNFCEKFSEGLWDKWVKLPTGDDLLKVEEAYRKCGYPGAVGSLDCTHFAWT-CPFSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKSVWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHKIPLLVPPFKNPLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKIDNAWFTACILHNMLHALDGLGDLEEDAD 1272
            HTP    +      M  D+D+ AV AA  A+V +L  M   +  +  DG +               D  AE     R R S  RPDY  S WG  L ++E L      L    REA  F+  FRVPY  FL  +E V  +FP    DV GR C P+ELKVLG L+VL  G CF DVA  +LMSRTTAE SFH FC  F+ GLW  W++LP G+ L +VE  YR  GYPGAVGS+DCTH  W  C FSE   HKGKEG+TTVV EA+CDH+GRI+A+TK YPGAENDKTVV+RD SV R+  EEPW S K+++Y      TEH G WLI DGGYH++PLL+ PFK   N+ E +WS+RLES+RKDIEC FGR+KGR+R FK  ILF  R KID+AWFTACI+HNML A DGL  LE D D
Sbjct:   56 HTPQKHNLRQPPHIMDDDLDEAAVTAAACASVHSLHTMSMQLNDLFEDGLEEQXXXXXXXXXXXXXDWSAE---AIRTRESRPRPDYNKSAWGLRLAQMESLRCSHN-LAQHSREARAFRADFRVPYEFFLEFVEMVRPVFPAREHDVCGRLCVPLELKVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMD 470          
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 9.240e-118
Identity = 158/235 (67.23%), Postives = 190/235 (80.85%), Query Frame = 1
Query:  562 MSRTTAENSFHNFCEKFSEGLWDKWVKLPTGDDLLKVEEAYRKCGYPGAVGSLDCTHFAWTC-PFSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKSVWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHKIPLLVPPFKNPLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKIDNAWFTACILHNMLHALDGLGDLEE 1263
            MS  TAE SFH+FCEKFS  LWD WVKLP GD+L +VE  +RK GYPGA+ S DCTHF W   P SE  ++ GKEG+ TVVVEA CDH+GRIIAATKSYPG+ENDKT+++RDKS+WRIRDEEPW SLK+KLY ++ +ETE++GAWL+VDGGY KIPLL+PP K+   +EE  WS+RLES+RKDIECC+GRVKGR+R FK  IL+ +R+ IDN WFTACILHNMLH  D L  + E
Sbjct:    1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKLDVMTE 235          
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.520e-110
Identity = 153/238 (64.29%), Postives = 181/238 (76.05%), Query Frame = 1
Query:  562 MSRTTAENSFHNFCEKFSEGLWDKWVKLPTGDDLLKVEEAYRKCGYPGAVGSLDCTHFAWT-CPFSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKSVWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHKIPLLVPPFKNPLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKIDNAWFTACILHNMLHALDGLGDLEEDAD 1272
            MSRTTAE SFH FC  F+ GLW  W++LP G+DL +VE  YR  GYPGAVGS+DCTH  W  C FSE   HKGKEG+TTVV EA+CDH+GRI+A+TK YPGAENDKTVV+RD SV R+  EEPW S K+++Y      TEH G WLI +GGYH++PLL+ PFK   N+ E +WS+RLES+RKDIEC FGR+KGR+R FK  ILF  R KID+AWFTACI+HNML A DGL  LE D D
Sbjct:    1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMD 238          
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 1.610e-109
Identity = 160/225 (71.11%), Postives = 178/225 (79.11%), Query Frame = 1
Query:  601 CEKFSEGLWDKWVKLPTGDDLLKVEEAYRKCGYPGAVGSLDCTHFAWT-CPFSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKSVWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHKIPLLVPPFKNPLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKIDNAWFTACILHNMLHALDGLGDLEEDAD 1272
            CEKFSEGLWD WVKLP GD+L KVEE YRKCGYPGA GS DCTHF W  CPFSEKN H GKEG+T++VVE  CDHSGRIIAATK+ PGAENDKTV+ RDKS+WRIRDEEPWKS     YT          AW+IVDGGY KIPLL+PP K    +EE  WS+RLES+RKDIECCFGRVKGRWR F G ILF +R+K DNA FTACILHNMLH+ + L ++EEDAD
Sbjct:   90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY----YTR---------AWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRLDEMEEDAD 301          
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 2.040e-101
Identity = 160/284 (56.34%), Postives = 185/284 (65.14%), Query Frame = 1
Query:  499 LGTLKVLASGCCFQDVATCTLMSRTTAENSFHNFCEKFSEGLWDKWVKLPTGDDLLKVEEAYRKCGYPGAVGSLDCTHFAWTCPFSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKSVWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHK----------------------------IPLLVPPFKNPLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKIDNAWFTACILHNMLHALDGLGDLEED 1266
            +GTLKVLASGCCFQDVA+ +LMSRTTAE SFH+FCEKFSEGLWD WVKLP GD+                                +KN H GKEG+T++VVE  CDHSGRIIAATK+YPGAENDKTV+ RDKS+WRIRDEEPWKS     YT          AW+IVDGGY K                            IPLL+PP K    +EE  WS+RLES+RKDIECCFGRVKGRWR F G +LF +R+K+DNAWFTACILHNMLH+ + L ++EED
Sbjct:    1 MGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEF-------------------------------KKNTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSY----YTR---------AWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNMLHSFNRLDEMEED 240          
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 3.560e-100
Identity = 145/248 (58.47%), Postives = 175/248 (70.56%), Query Frame = 1
Query:  490 LKVLGTLKVLASGCCFQDVATCTLMSRTTAENSFHNFCEKFSEGLWDKWVKLPTGDDLLKVEEAYRKCGYPGAVGSLDCTHFAWT-CPFSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKSVWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHKIPLLVPPFKNPLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKIDNAWFTACILHNML 1230
            L+VLG L+ L  G CF DVA  +LMSRTTAE SFH FC  F+ GLW  W++LP G+DL +VE  YR  GYPGAVGS+DCTH  W  C FSE   HKGKEG+TTVV EA+CDH+GRI+A+TK YPGAENDKTVV                  K+++Y      T+H G WLI DGGYH++PLL+ PFK   N+ E +WS+RLES+RKD+EC FGR+KGR+R FK  ILF  R KID+A FTACI+H ML
Sbjct:    4 LQVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTML 235          
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 1.100e-99
Identity = 174/398 (43.72%), Postives = 245/398 (61.56%), Query Frame = 1
Query:   91 MDDEAVMAAGAAAVATLQNMQ---SIMLGVATDGDDVAQELAFEEDTGAEEEKPKRIRRSYDRPDYWGSVWGGWLRRLEELEAGEGGLDPSCREAVQFKGAFRVPYSLFLMIMESVSSI--FPDVSRDVAGRECPPVELKVLGTLKVLASGCCFQDVATCTLMSRTTAENSFHNFCEKFSEGLWDKWVKLPTGDDLLKVEEAYRKCGYPGAVGSLDCTHFAW-TCPFSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKSVWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHKIPLLVPPFKNPLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKIDNAWFTACILHNMLHALDGLGDLEED 1266
            +D  A  A  A A A+LQ +Q   ++   +  D +D   EL  E+D  + E K +R+   Y R DY  S W  W   +E  E GE   D + REA +F+  FRVPY  F+ ++E V     FP    DV GR+  PVELKVL  L++L+ G  F D+   + +S  T  ++FH FC+ F+  L+D++V LPTG+DL KV E Y + G+PGAVGS D TH  W  CP+++  I+ GKEG  TV  +   DHSGR++A T+ + GA NDKT+++ DK+V RIR +  +   K+KLY  +  + E +G +L+VD GYHK   L+PP K P++  ++ +S+RLES RKD+EC FG +KGR+R  K  I F  +E IDN +FT CILHNMLH+ D  GD+ E+
Sbjct:   43 IDVPAAFATTAVATASLQQLQRSVAVWDVIMEDFEDDL-ELDTEDDEASREVKRRRV---YVRKDYTKSGW--WQELMELRETGE--TDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEE 432          
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 8.750e-99
Identity = 155/251 (61.75%), Postives = 179/251 (71.31%), Query Frame = 1
Query:  562 MSRTTAENSFHNFCEKFSEGLWDKWVKLPTGDD---LLKVEEAYRKCG--------YPGAVGS---LDCTHFAWTCPFSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKSVWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHKIPLLVPPFKNPLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKIDNAWFTACILHNMLHALDGLGDLEEDAD 1272
            MSRTTAE SFH+FCEKFSEGLWD W    TG +    L VE  +   G        YPGA      +    F W     E+    GKEG+T++VVE  CDHSGRIIAATK+YPGAENDKTV+ R K +WRIRDEEPWKS KFKLY ++ TETE  GAW+IVDGGY KIPLL+PP K    +EE  WS+RLES+RKDIECCFGRVKG WR F G ILF +R K+DNAWFTACILHNMLH+ + L ++EEDAD
Sbjct:    1 MSRTTAETSFHHFCEKFSEGLWDTW-NTHTGKEGYTSLVVECTWGHSGRIIAATKTYPGAENDKTVIARDKFIWRIR-DEEPWKXGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARGKFIWRIRDEEPWKSYKFKLYNADGTETECTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHGWSRRLESMRKDIECCFGRVKGLWRLFGGDILFSTRPKVDNAWFTACILHNMLHSFNRLDEMEEDAD 249          
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Match: A0A6H5K4F4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F4_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 5.320e-90
Identity = 131/222 (59.01%), Postives = 155/222 (69.82%), Query Frame = 1
Query:  583 NSFHNFCEKFSEGLWDKWVKLPTGDDLLKVEEAYRKCGYPGA-------------------VGSLDCTHFAWTCPFSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKSVWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHKIPLLVPPFKNPLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKID 1191
            +SFH+FCEKFSEGLWD WVKLP GD+  KVEE YRKCGYPGA                                     N H GKEG+T++VVE  CDHSGRIIAATK+YPGAENDK V+ RDKS+WR+RDE+PWKS KFKLY ++ TETE+ GAW+IVDGGY KIPLL+PP K    +EE  WS+RLES+RKDIECCFGRVKGRW  F G I F+  ++++
Sbjct:   19 DSFHHFCEKFSEGLWDTWVKLPGGDEFKKVEEIYRKCGYPGARKVXTTAETSXXXXXXXXXXXXXXXXXXXXXXXXXXXNTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKKVIARDKSIWRVRDEDPWKSYKFKLYNADGTETEYTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHNWSRRLESMRKDIECCFGRVKGRWMLFSGDIFFNRLDEME 240          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16523.4422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV45_9PHAE2.930e-14460.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0H2_9PHAE1.340e-14153.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K604_9PHAE9.240e-11867.23Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRU1_9PHAE1.520e-11064.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K7N8_9PHAE1.610e-10971.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVL5_9PHAE2.040e-10156.34DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JY35_9PHAE3.560e-10058.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.100e-9943.72Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU81_9PHAE8.750e-9961.75DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K4F4_9PHAE5.320e-9059.01DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16523contigL-elsbetiae_contig16523:577..3090 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score199.9
Seed ortholog evalue2.4e-48
Seed eggNOG ortholog159749.K0T1Y8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1274
Cds size1272
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16523.4422.1prot_L-elsbetiae_contig16523.4422.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16523 577..3090 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815684.7779922-CDS-L-elsbetiae_contig16523:576..10711622815684.7779922-CDS-L-elsbetiae_contig16523:576..1071Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16523 577..1071 +
1691683036.6457183-CDS-L-elsbetiae_contig16523:576..10711691683036.6457183-CDS-L-elsbetiae_contig16523:576..1071Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16523 577..1071 +
1622815684.7926514-CDS-L-elsbetiae_contig16523:1674..21991622815684.7926514-CDS-L-elsbetiae_contig16523:1674..2199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16523 1675..2199 +
1691683036.6560743-CDS-L-elsbetiae_contig16523:1674..21991691683036.6560743-CDS-L-elsbetiae_contig16523:1674..2199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16523 1675..2199 +
1622815684.8083522-CDS-L-elsbetiae_contig16523:2838..30901622815684.8083522-CDS-L-elsbetiae_contig16523:2838..3090Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16523 2839..3090 +
1691683036.6644642-CDS-L-elsbetiae_contig16523:2838..30901691683036.6644642-CDS-L-elsbetiae_contig16523:2838..3090Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16523 2839..3090 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16523.4422.1

>prot_L-elsbetiae_contig16523.4422.1 ID=prot_L-elsbetiae_contig16523.4422.1|Name=mRNA_L-elsbetiae_contig16523.4422.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=424bp
RPAPSTLPASHTHTPHTHTIDMGESAMAMDMDDEAVMAAGAAAVATLQNM
QSIMLGVATDGDDVAQELAFEEDTGAEEEKPKRIRRSYDRPDYWGSVWGG
WLRRLEELEAGEGGLDPSCREAVQFKGAFRVPYSLFLMIMESVSSIFPDV
SRDVAGRECPPVELKVLGTLKVLASGCCFQDVATCTLMSRTTAENSFHNF
CEKFSEGLWDKWVKLPTGDDLLKVEEAYRKCGYPGAVGSLDCTHFAWTCP
FSEKNIHKGKEGHTTVVVEAMCDHSGRIIAATKSYPGAENDKTVVKRDKS
VWRIRDEEPWKSLKFKLYTSNDTETEHEGAWLIVDGGYHKIPLLVPPFKN
PLNLEEVKWSQRLESIRKDIECCFGRVKGRWRFFKGTILFDSREKIDNAW
FTACILHNMLHALDGLGDLEEDAD
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mRNA from alignment at L-elsbetiae_contig16523:577..3090+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16523.4422.1 ID=mRNA_L-elsbetiae_contig16523.4422.1|Name=mRNA_L-elsbetiae_contig16523.4422.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2514bp|location=Sequence derived from alignment at L-elsbetiae_contig16523:577..3090+ (Laminarionema elsbetiae ELsaHSoW15)
CGTCCTGCGCCTTCCACGCTGCCCGCGAGCCACACACACACGCCACACAC ACACACGATCGACATGGGAGAATCCGCCATGGCCATGGACATGGATGATG AAGCCGTCATGGCTGCGGGTGCCGCAGCAGTAGCGACTTTGCAGAACATG CAGAGCATCATGCTTGGTGTCGCGACCGACGGCGACGACGTGGCACAAGA GTTAGCTTTTGAGGAGGACACGGGAGCAGAGGAGGAGAAGCCCAAGCGCA TCCGGCGCTCCTACGATCGCCCAGACTACTGGGGGTCTGTCTGGGGGGGT TGGCTGCGGCGACTGGAAGAGCTGGAAGCTGGTGAAGGCGGACTTGATCC GAGCTGCAGAGAAGCTGTGCAGTTCAAGGGCGCCTTTCGAGTGCCGTACT CGCTGTTCCTCATGATCATGGAGTCTGTCTCGTCCATATTCCCAGACGTG TCTAGGGATGTCGCGGGCCGAGAGTGTCCACCCGTGGAACTCAAGGTGTG TCGCGTGCTGGTCGTGACCATGTTTGATTGGTATTTACGTATTTGTCTGT GTCTCTGTTGTTCATCAGACCGGATCGAAAAATTGGAGAAGGTCTGTAGA AGTTCCTTGTGCCACGTCGTCGCCGCCGGGTTGTAGAAGTTCCTTGCCTG CTTCCTTCGAATCTATGTAGTATACAACGTTTCCTCATCCCAAATCAGGC ATGTGCAAGGAACACAGCCCGCACCACAGCTAGCTGCATCCCTGCCTGTG TAGTCTAGAGGGAGAGCAAACGTTCATCATGTGGCAAATCTTTTCCCCCC CCCCCCCCCGTTTATGTACTCAGTGCATGAGCTTGGTCAGGACGCCCTGC AGGCACGAATACAGCAGTGTAGTGTCATGCGCATGTTGCCTGATGGAAGA GAGGTTGGTACCGCAGAGAGTGTTGCTGTGCACTTGAAATTCACCGGTGC CAGGCAGCCGCTGCTGTCGCGAATACGACAGTGCTCACGTTCATCGGTCG GAATGCACACGTTCGTGGCCCGCGCGTACTGTGTACGGTGTGGAAAAAAC AGACAAGACGTATTCTTACGTCGTGCTGCTGCCCTTATGCTGCCACAGGT GCTCGGGACTCTGAAGGTGTTGGCTTCAGGATGCTGCTTCCAGGACGTGG CAACCTGCACTCTGATGAGTCGCACCACCGCCGAAAACTCTTTTCACAAT TTCTGCGAGAAGTTTTCGGAGGGTCTTTGGGACAAATGGGTGAAGCTTCC GACGGGCGATGATCTACTGAAGGTGGAGGAGGCGTACCGCAAGTGTGGGT ACCCCGGGGCGGTGGGCTCCCTCGACTGCACGCATTTCGCGTGGACGTGC CCGTTCTCCGAGAAAAACATCCACAAAGGGAAGGAGGGGCACACGACCGT CGTGGTCGAGGCGATGTGCGACCACTCCGGCCGCATCATCGCCGCCACCA AGTCGTATCCAGGCGCTGAGAACGACAAGACAGTGGTGAAACGCGACAAG TCCGTCTGGCGAATACGAGACGAGGAGCCGTGGAAGAGCTTGAAGTTCAA GCTCTACACCTCCAACGACACGGAGACCGAGCACGAGGGGGCGTGGCTCA TCGTGGACGGCGGGTACCACAAGGTGAGACATGTGCACGCAACGCTGGGG TGGAGAGTGGGTATTCAGAAGCCGGGGGTCGATTTCGCAAGGTGTACATA AGTGTTCCTTCGTGCCTGCTTCATTTTGTTTGCAGATGCTGATGCTGTAT TTCTTTGTTCCCAGGAAGGGTACAAAATCATGACATCGACGTTGCGGGAC AGCTATCCCTACCGATTCTAGAGTCCCGGTTCTATGCTTCTTGCTTATTT CCCCCCTTCCCCCCTAGAACACGTTGAAGCTCGTACAGCAGTAGGCCGTC CGTGCTTGATAGGTTATGGGGTTGCAGGTACCTAACCTGACAGCACGCGA AGGTATCCCGAGGTGCTGCCCTCTTAAGTCGTAATTTTGGGGGCACACCC ATGATTTCTTTGTTGTGGTGTGTGTGTATGTGTTGTATGTGTTTGTGTGT GTGTGTGTGTGTTTTGTTTTGTTTTGTTGCGGGAGTTGACGTAGGGTCAA CCCGTTCCCTGCTGGTACACAGACATGACAAAGTGGGAACGTTTGGCTCT AGTTGTCCGTTGACTTTCTAGATTCCTATGGTGTTCATTCGCTTCAATGA TGTCACCCAACACTGACATGCCGCCCAACGACCAACGACGTCCGAACATT GTTGTGCGCCAGATTCCGCTTCTCGTGCCGCCGTTCAAGAACCCTCTCAA CTTGGAGGAGGTCAAGTGGAGCCAGCGGTTAGAGAGCATCCGCAAGGACA TCGAGTGCTGTTTTGGCAGAGTCAAGGGTCGGTGGAGGTTCTTCAAGGGC ACCATTCTCTTCGATAGCCGCGAGAAGATCGACAACGCGTGGTTCACGGC ATGCATCTTGCACAACATGCTTCACGCGTTGGACGGGCTGGGTGACCTCG AAGAGGACGCGGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16523:577..3090+

>mRNA_L-elsbetiae_contig16523.4422.1 ID=mRNA_L-elsbetiae_contig16523.4422.1|Name=mRNA_L-elsbetiae_contig16523.4422.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2544bp|location=Sequence derived from alignment at L-elsbetiae_contig16523:577..3090+ (Laminarionema elsbetiae ELsaHSoW15)
CGTCCTGCGCCTTCCACGCTGCCCGCGAGCCACACACACACGCCACACAC
ACACACGATCGACATGGGAGAATCCGCCATGGCCATGGACATGGATGATG
AAGCCGTCATGGCTGCGGGTGCCGCAGCAGTAGCGACTTTGCAGAACATG
CAGAGCATCATGCTTGGTGTCGCGACCGACGGCGACGACGTGGCACAAGA
GTTAGCTTTTGAGGAGGACACGGGAGCAGAGGAGGAGAAGCCCAAGCGCA
TCCGGCGCTCCTACGATCGCCCAGACTACTGGGGGTCTGTCTGGGGGGGT
TGGCTGCGGCGACTGGAAGAGCTGGAAGCTGGTGAAGGCGGACTTGATCC
GAGCTGCAGAGAAGCTGTGCAGTTCAAGGGCGCCTTTCGAGTGCCGTACT
CGCTGTTCCTCATGATCATGGAGTCTGTCTCGTCCATATTCCCAGACGTG
TCTAGGGATGTCGCGGGCCGAGAGTGTCCACCCGTGGAACTCAAGCGTCC
TGCGCCTTCCACGCTGCCCGCGAGCCACACACACACGCCACACACACACA
CGATCGACATGGGAGAATCCGCCATGGCCATGGACATGGATGATGAAGCC
GTCATGGCTGCGGGTGCCGCAGCAGTAGCGACTTTGCAGAACATGCAGAG
CATCATGCTTGGTGTCGCGACCGACGGCGACGACGTGGCACAAGAGTTAG
CTTTTGAGGAGGACACGGGAGCAGAGGAGGAGAAGCCCAAGCGCATCCGG
CGCTCCTACGATCGCCCAGACTACTGGGGGTCTGTCTGGGGGGGTTGGCT
GCGGCGACTGGAAGAGCTGGAAGCTGGTGAAGGCGGACTTGATCCGAGCT
GCAGAGAAGCTGTGCAGTTCAAGGGCGCCTTTCGAGTGCCGTACTCGCTG
TTCCTCATGATCATGGAGTCTGTCTCGTCCATATTCCCAGACGTGTCTAG
GGATGTCGCGGGCCGAGAGTGTCCACCCGTGGAACTCAAGGTGCTCGGGA
CTCTGAAGGTGTTGGCTTCAGGATGCTGCTTCCAGGACGTGGCAACCTGC
ACTCTGATGAGTCGCACCACCGCCGAAAACTCTTTTCACAATTTCTGCGA
GAAGTTTTCGGAGGGTCTTTGGGACAAATGGGTGAAGCTTCCGACGGGCG
ATGATCTACTGAAGGTGGAGGAGGCGTACCGCAAGTGTGGGTACCCCGGG
GCGGTGGGCTCCCTCGACTGCACGCATTTCGCGTGGACGTGCCCGTTCTC
CGAGAAAAACATCCACAAAGGGAAGGAGGGGCACACGACCGTCGTGGTCG
AGGCGATGTGCGACCACTCCGGCCGCATCATCGCCGCCACCAAGTCGTAT
CCAGGCGCTGAGAACGACAAGACAGTGGTGAAACGCGACAAGTCCGTCTG
GCGAATACGAGACGAGGAGCCGTGGAAGAGCTTGAAGTTCAAGCTCTACA
CCTCCAACGACACGGAGACCGAGCACGAGGGGGCGTGGCTCATCGTGGAC
GGCGGGTACCACAAGGTGCTCGGGACTCTGAAGGTGTTGGCTTCAGGATG
CTGCTTCCAGGACGTGGCAACCTGCACTCTGATGAGTCGCACCACCGCCG
AAAACTCTTTTCACAATTTCTGCGAGAAGTTTTCGGAGGGTCTTTGGGAC
AAATGGGTGAAGCTTCCGACGGGCGATGATCTACTGAAGGTGGAGGAGGC
GTACCGCAAGTGTGGGTACCCCGGGGCGGTGGGCTCCCTCGACTGCACGC
ATTTCGCGTGGACGTGCCCGTTCTCCGAGAAAAACATCCACAAAGGGAAG
GAGGGGCACACGACCGTCGTGGTCGAGGCGATGTGCGACCACTCCGGCCG
CATCATCGCCGCCACCAAGTCGTATCCAGGCGCTGAGAACGACAAGACAG
TGGTGAAACGCGACAAGTCCGTCTGGCGAATACGAGACGAGGAGCCGTGG
AAGAGCTTGAAGTTCAAGCTCTACACCTCCAACGACACGGAGACCGAGCA
CGAGGGGGCGTGGCTCATCGTGGACGGCGGGTACCACAAGATTCCGCTTC
TCGTGCCGCCGTTCAAGAACCCTCTCAACTTGGAGGAGGTCAAGTGGAGC
CAGCGGTTAGAGAGCATCCGCAAGGACATCGAGTGCTGTTTTGGCAGAGT
CAAGGGTCGGTGGAGGTTCTTCAAGGGCACCATTCTCTTCGATAGCCGCG
AGAAGATCGACAACGCGTGGTTCACGGCATGCATCTTGCACAACATGCTT
CACGCGTTGGACGGGCTGGGTGACCTCGAAGAGGACGCGGACATTCCGCT
TCTCGTGCCGCCGTTCAAGAACCCTCTCAACTTGGAGGAGGTCAAGTGGA
GCCAGCGGTTAGAGAGCATCCGCAAGGACATCGAGTGCTGTTTTGGCAGA
GTCAAGGGTCGGTGGAGGTTCTTCAAGGGCACCATTCTCTTCGATAGCCG
CGAGAAGATCGACAACGCGTGGTTCACGGCATGCATCTTGCACAACATGC
TTCACGCGTTGGACGGGCTGGGTGACCTCGAAGAGGACGCGGAC
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