mRNA_L-elsbetiae_contig16519.4418.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Match: D7FJG4_ECTSI (Prefoldin subunit, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG4_ECTSI) HSP 1 Score: 119 bits (297), Expect = 1.230e-32 Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 1 Query: 1 RMVVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKVGVRVEVDQ 222 +MVVDTLEP++ RRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWK+ ++ Q Sbjct: 53 QMVVDTLEPLEGTRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKIKYKIRSQQ 126
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Match: A0A7S0CI05_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CI05_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 8.730e-17 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 1 RMVVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKVGVRVEVDQ 222 R+V DTL+P++ RRAYRLVGGVLVERTVGE+LP V N+E I+ +L L K+KE ++WK ++ Q Sbjct: 71 RLVEDTLKPLETTRRAYRLVGGVLVERTVGEILPAVTTNKENIQMVLDNLQKNMEAKQKETSDWKAKYNIKTQQ 144
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Match: K0S7I7_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7I7_THAOC) HSP 1 Score: 76.3 bits (186), Expect = 4.920e-16 Identity = 39/81 (48.15%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 1 RMVVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKVGVRVEV-DQPDTSNR 240 R+V +TLEPMD RRA+RLVGGVLVERT+ EVLPTV N++ + L++Q+ T K+K+ +EWK ++ ++ D N+ Sbjct: 44 RLVEETLEPMDPDRRAFRLVGGVLVERTIREVLPTVTENRKRLDDLIEQVKTQMEAKQKDVSEWKAKYNIKTQEEVDAENK 124
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Match: A0A7S2UDR3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDR3_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 4.350e-15 Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 1 RMVVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKVGVRVEV 216 R+V +TL+P+D RRA+RLVGGVLVERTVGEVLP+V N+ + ++++ L T K+KE A WK ++ Sbjct: 15 RLVEETLKPLDPDRRAFRLVGGVLVERTVGEVLPSVMTNRSNLDEVVKTLQTRLETKQKETAAWKAKYNIKT 86
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Match: A0A1L9TL30_9EURO (Uncharacterized protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A1L9TL30_9EURO) HSP 1 Score: 73.6 bits (179), Expect = 4.610e-15 Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 1 Query: 1 RMVVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKVGVRVEVDQP 225 ++V+DTLEP+ R +R+V GVLVERTV +VLPT+K N +G+KQ+L++L + +K+ E WK ++V QP Sbjct: 44 KLVIDTLEPLPQDRTCFRMVNGVLVERTVSDVLPTLKTNSDGLKQVLEELLKSYKSKQAEMDSWKKKNNIQVVQP 118
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Match: L8GFE5_ACACA (Prefoldin subunit 2, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GFE5_ACACA) HSP 1 Score: 73.6 bits (179), Expect = 6.980e-15 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 1 RMVVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKVGVRVEV 216 R+V+D + +D RR YRLVGGVLVERTVGEVLP V+ N EGI+Q+L+ L + K+K E+KV ++ V Sbjct: 39 RLVIDAVSGLDAGRRCYRLVGGVLVERTVGEVLPAVRKNLEGIEQILKTLNASLLQKDKALNEFKVQHKIRV 110
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Match: A0A6P4AI01_ZIZJJ (probable prefoldin subunit 2 n=3 Tax=Rhamnaceae TaxID=3608 RepID=A0A6P4AI01_ZIZJJ) HSP 1 Score: 73.2 bits (178), Expect = 1.340e-14 Identity = 31/76 (40.79%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 4 MVVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKVGVRVEVDQPDT 231 +V++ ++P+D +RR YR++GGVLVERT+ EVLP V+ N+EG+++++ +L K+KE AE++ ++ + +PD+ Sbjct: 48 LVINAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEIAEFEAKYKIRIKKPDS 123
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Match: A0A4P9Y4X5_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y4X5_9FUNG) HSP 1 Score: 71.2 bits (173), Expect = 1.610e-14 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 1 RMVVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKVGVRVEV 216 R+VV+T+ PM R+ +RLVGGVLVERTVGEVLP +KANQ+GIK LL++L +K+ E ++ R+++ Sbjct: 1 RLVVNTITPMSGDRKCFRLVGGVLVERTVGEVLPALKANQDGIKGLLEKLVEQYKSKDTEFLAFQKEHRIQI 72
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Match: A0A507FQL5_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FQL5_9FUNG) HSP 1 Score: 72.0 bits (175), Expect = 1.860e-14 Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 1 RMVVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKE----AAEWKVGVR 207 +MVVDT+ P+D R+ +RLV GVLVERTVGEVLPT+K N + I +++QQL +T KE+E +W + V+ Sbjct: 45 KMVVDTMTPLDGGRKCFRLVNGVLVERTVGEVLPTLKLNMDNIDKIVQQLVSTYKKKEEEFMAYQKKWNIQVK 117
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Match: A0A3M6VHU8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHU8_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.210e-14 Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 1 Query: 7 VVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWKVGVRVEVD 219 V+ TL + R+AYR++GGVLVERTV EVLP VKAN++GI Q+L+QL + +KEK A EW+ ++ D Sbjct: 41 VIQTLTELPNGRKAYRMIGGVLVERTVQEVLPAVKANRDGIAQVLKQLNESIKHKEKTADEWQQKYNIQED 111 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16519.4418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16519.4418.1 >prot_L-elsbetiae_contig16519.4418.1 ID=prot_L-elsbetiae_contig16519.4418.1|Name=mRNA_L-elsbetiae_contig16519.4418.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp MVVDTLEPMDVARRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLAback to top mRNA from alignment at L-elsbetiae_contig16519:2986..3228- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16519.4418.1 ID=mRNA_L-elsbetiae_contig16519.4418.1|Name=mRNA_L-elsbetiae_contig16519.4418.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=243bp|location=Sequence derived from alignment at L-elsbetiae_contig16519:2986..3228- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16519:2986..3228- >mRNA_L-elsbetiae_contig16519.4418.1 ID=mRNA_L-elsbetiae_contig16519.4418.1|Name=mRNA_L-elsbetiae_contig16519.4418.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=480bp|location=Sequence derived from alignment at L-elsbetiae_contig16519:2986..3228- (Laminarionema elsbetiae ELsaHSoW15)back to top |