mRNA_L-elsbetiae_contig1643.4368.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Match: A0A6H5LB61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB61_9PHAE) HSP 1 Score: 338 bits (866), Expect = 7.640e-114 Identity = 176/214 (82.24%), Postives = 193/214 (90.19%), Query Frame = 1 Query: 1 QVPFEYQDRVLTYGILGAVVMRAIFIGLGEAAMSVFHPILLGFAAVLVFSSYKLLSEGEDDEDEDLSDNKLIAFASSALDATDSYDGANFFTVVDGVRRATPLLLVLACIELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLYTLLSSAVEDLVYLRPAVAIVLGFVGAKLGGEFFGYDVSTELSLGIITGLLGGGIGLSLIERQEE 642 +VPF+ Q+RVLTYGI+GAVVMRAIFIGLGEA MSVFHPILLGFA +L++SSY LLSE E D DEDLSDNKLIAFASS LDAT+SYDG FFT+VDGVRRATPLLLVL C+ELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSL+TLL+SAVEDLVYLRPAVA VLGFVG K+GGEFFGY+VSTELSL IITG+L G+ SLI E+ Sbjct: 136 KVPFDAQNRVLTYGIIGAVVMRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYNVSTELSLEIITGVLAAGVAASLILPGEK 349
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Match: D7FYT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT8_ECTSI) HSP 1 Score: 313 bits (801), Expect = 2.970e-106 Identity = 162/189 (85.71%), Postives = 176/189 (93.12%), Query Frame = 1 Query: 61 MRAIFIGLGEAAMSVFHPILLGFAAVLVFSSYKLLSEGEDDEDEDLSDNKLIAFASSALDATDSYDGANFFTVVDGVRRATPLLLVLACIELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLYTLLSSAVEDLVYLRPAVAIVLGFVGAKLGGEFFGYDVSTELSLGIITGLLGGGIGLSLI 627 MRAIFIGLGEAAMSVFHPILLGFA +L++SSY LLSE E D DEDLSDNKLIAFASS+LDAT+SYDG FFT+VDGVRRATPLLLVL C+ELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSL+TLL+SAVEDLVYLRPAVA+VLGFVG K+GG+FFGYDVSTELSLGIITG+L G+ SLI Sbjct: 1 MRAIFIGLGEAAMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSSLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAVVLGFVGCKIGGDFFGYDVSTELSLGIITGVLAAGVAASLI 189
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Match: A0A835YKR2_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR2_9STRA) HSP 1 Score: 279 bits (713), Expect = 1.610e-90 Identity = 143/213 (67.14%), Postives = 175/213 (82.16%), Query Frame = 1 Query: 4 VPFEYQDRVLTYGILGAVVMRAIFIGLGEAAMSVFHPILLGFAAVLVFSSYKLLSEGEDDEDEDLSDNKLIAFASSALDATDSYDGANFFTVVDGVRRATPLLLVLACIELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLYTLLSSAVEDLVYLRPAVAIVLGFVGAKLGGEFFGYDVSTELSLGIITGLLGGGIGLSLIERQEE 642 VP YQ RVL +GI+GAV++R +FI LGEAA+ F P+LLGFAA+L+ S+YKL +E E E DL+DN+++ F+S L ATD YDG FFT+VDGVRRATPLLLVL C+ELSD+VFAVDSIPAVF T+DPF+VYTSNI+AI+NLRSLYT+LS+AV DL YLRPAVA VL FVGAKL E+FGY+V T LSLG+I+ LLGGG+ LSL++ EE Sbjct: 143 VPISYQQRVLRWGIVGAVILRGVFIALGEAALESFQPVLLGFAAILMVSAYKLFTEEEGGE-ADLTDNQVVQFSSKILKATDQYDGDKFFTMVDGVRRATPLLLVLVCVELSDLVFAVDSIPAVFGCTRDPFLVYTSNIFAIVNLRSLYTVLSNAVGDLEYLRPAVAGVLAFVGAKLAAEYFGYEVDTLLSLGVISTLLGGGVALSLLKGDEE 354
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Match: A0A835YPV1_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV1_9STRA) HSP 1 Score: 271 bits (693), Expect = 2.270e-88 Identity = 139/213 (65.26%), Postives = 170/213 (79.81%), Query Frame = 1 Query: 4 VPFEYQDRVLTYGILGAVVMRAIFIGLGEAAMSVFHPILLGFAAVLVFSSYKLLSEGEDDEDEDLSDNKLIAFASSALDATDSYDGANFFTVVDGVRRATPLLLVLACIELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLYTLLSSAVEDLVYLRPAVAIVLGFVGAKLGGEFFGYDVSTELSLGIITGLLGGGIGLSLIERQEE 642 VP YQ RVL +GI+GAV++R IF+ LG+AA+ F P+LL FA +L+ SSYKLL+EG D E+E L +NK++ + L AT+ YDG FFT+VDG+RRATPLLLVL C+E SD+VFAVDSIPAVF VTKDP IVY+SNI+AILNLRSLYT+LS+AV DLVYLRPAVA+VL FVG KLG E+F V T LSLGII+ +L GG+GLSL ER+ Sbjct: 74 VPVAYQGRVLQWGIIGAVILRGIFVALGQAALESFQPVLLIFAGILLVSSYKLLTEGGDGEEESLHNNKIVQVSKRLLRATEEYDGDRFFTMVDGMRRATPLLLVLVCVEASDLVFAVDSIPAVFGVTKDPLIVYSSNIFAILNLRSLYTVLSTAVGDLVYLRPAVALVLAFVGLKLGAEYFSVTVDTVLSLGIISTILAGGVGLSLYERRNS 286
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Match: A0A7S2V8N4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N4_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.130e-85 Identity = 136/218 (62.39%), Postives = 173/218 (79.36%), Query Frame = 1 Query: 1 QVPFEYQDRVLTYGILGAVVMRAIFIGLGEAAMSVFHPILLGFAAVLVFSSYKLLSE---GEDDEDEDLSDNKLIAFASSALDATDSYDGANFFTVVDGVRRATPLLLVLACIELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLYTLLSSAVEDLVYLRPAVAIVLGFVGAKLGGEFFGYDVSTELSLGIITGLLGGGIGLSLIERQEEA 645 QVP Y+++VL +GI GA+++R I IG+G A+ +F PI L FAAVL +SSYK+L+E GE +E+EDL DN +I AS L +D YDG FFTVVDGV+ ATPLLL L C+ELSDIVFAVDS+PAVF VTKDPFIVYTSNI+AIL LRSLYT+LS AV +L YL+PAV IVLGF+G+KLG E++GY++ST +SLG++ LLGGG+GLS++ + A Sbjct: 157 QVPKCYENQVLNWGIFGALLLRGIMIGIGVEAVELFQPIFLVFAAVLAYSSYKILAEWVTGEGEEEEDLEDNAIIKLASKVLTVSDEYDGGKFFTVVDGVKVATPLLLCLVCVELSDIVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLSKAVSELDYLQPAVGIVLGFIGSKLGLEYYGYEISTGVSLGVVAALLGGGVGLSVLTKSFRA 374
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Match: A0A7R9W7A1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W7A1_9STRA) HSP 1 Score: 253 bits (647), Expect = 6.940e-82 Identity = 125/216 (57.87%), Postives = 170/216 (78.70%), Query Frame = 1 Query: 4 VPFEYQDRVLTYGILGAVVMRAIFIGLGEAAMSVFHPILLGFAAVLVFSSYKLLSEGEDDEDEDLSDNKLIAFASSALDATDSYDGANFFTVVDGVRRATPLLLVLACIELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLYTLLSSAVEDLVYLRPAVAIVLGFVGAKLGGEFFGYDVSTELSLGIITGLLGGGIGLSLI---ERQEE 642 VP + QDRVL +GI GAVVMRA+ IGLG AA+ FH ILL FA +LV+SS K+L GE +E+ED+S+N+++ F+ + +D+ D +DG FFT VDGV++ATPL + + +ELSD+VFAVDSIPAVF VT++P +V+TSN++AI+ LRSLYT+LS A DL YL PAVAIVLGF+G K+ E+FGY ++TE++L ++ LLGGG+GLSL +R+EE Sbjct: 43 VPLKAQDRVLNWGIYGAVVMRAVMIGLGAAALENFHAILLVFAGILVYSSVKVLFGGEGEEEEDMSENQIVKFSKNLIDSVDQFDGDRFFTFVDGVKKATPLFICMIAVELSDVVFAVDSIPAVFGVTENPLVVFTSNMFAIMGLRSLYTILSKAASDLEYLEPAVAIVLGFIGGKMIAEYFGYKLATEIALAVVVTLLGGGVGLSLYAKGQREEE 258
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Match: A0A7S2FP03_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FP03_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.940e-81 Identity = 129/216 (59.72%), Postives = 169/216 (78.24%), Query Frame = 1 Query: 1 QVPFEYQDRVLTYGILGAVVMRAIFIGLGEAAMSVFHPILLGFAAVLVFSSYKLLSEGEDDEDEDLSDNKLIAFASSALDATDSYDGANFFTVV-DGVRRATPLLLVLACIELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLYTLLSSAVEDLVYLRPAVAIVLGFVGAKLGGEFFGYDVSTELSLGIITGLLGGGIGLSLIERQEEA 645 QVP YQ+RVL +G +GAVV+R IFI LG A+S F +LL F+ +L FS YK+L++G++ D LSDN ++ + +D+TD YDG NFFT DGVR+ATPLLL L C+ELSD+VFAVDS+PAVF VTKDPFIV+TSN++AI++LRSLYT++S+AV DL YL+PAV +VL FVGAKLG +F Y++S +SLG+I+ LL GGI LSL ER+ +A Sbjct: 26 QVPQAYQNRVLKWGFIGAVVLRFIFIALGAVAISQFRSVLLLFSGILFFSGYKILTKGDEKPDA-LSDNAIVKLSRQLVDSTDEYDGENFFTTASDGVRKATPLLLALICLELSDLVFAVDSVPAVFGVTKDPFIVFTSNLFAIVSLRSLYTIISNAVNDLKYLQPAVGLVLAFVGAKLGAGYFDYEISNLISLGVISTLLSGGIALSLYEREADA 240
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Match: A0A7S4NGX5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NGX5_9STRA) HSP 1 Score: 254 bits (650), Expect = 2.610e-80 Identity = 127/217 (58.53%), Postives = 172/217 (79.26%), Query Frame = 1 Query: 4 VPFEYQDRVLTYGILGAVVMRAIFIGLGEAAMSVFHPILLGFAAVLVFSSYKLLSEGEDDEDEDLSDNKLIAFASSALDATDSYDGANFFTVVDGVRRATPLLLVLACIELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLYTLLSSAVEDLVYLRPAVAIVLGFVGAKLGGEFFGYDVSTELSLGIITGLLGGGIGLSLIERQ---EEA 645 VP + QDRVL +GI GAVVMRAI IGLG AA+ FH ILL FA +LV+SS K+L GED+E+ED+++N ++ F+ S +D+ D++DG FFT+VDGV++ATPL + + +ELSD+VFAVDSIPAVF VT++P +V+TSNI+AI+ LRSLYT+LS A DL YL PAVAIVLGF+GAK+ E+ GY ++TE++L ++ LLGGG+GLS+ ++ EEA Sbjct: 196 VPIKAQDRVLNWGIYGAVVMRAIMIGLGAAALENFHAILLVFAGILVYSSGKVLFGGEDEEEEDMNENAIVNFSKSLIDSVDNFDGDRFFTIVDGVKKATPLFICMIAVELSDVVFAVDSIPAVFGVTENPLVVFTSNIFAIMGLRSLYTILSKAAADLEYLEPAVAIVLGFIGAKMIAEYLGYKIATEVALAVVATLLGGGVGLSIWAKENGEEEA 412
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Match: A4S7T9_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7T9_OSTLU) HSP 1 Score: 249 bits (636), Expect = 6.150e-80 Identity = 128/214 (59.81%), Postives = 168/214 (78.50%), Query Frame = 1 Query: 1 QVPFEYQDRVLTYGILGAVVMRAIFIGLGEAAMSVFHPILLGFAAVLVFSSYKLLSEGEDDEDEDLSDNKLIAFASSALDATDSYDGANFFTVVDGVRRATPLLLVLACIELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLYTLLSSAVEDLVYLRPAVAIVLGFVGAKLGGEFFGYDVSTELSLGIITGLLGGGIGLSLIERQEE 642 +VP E Q RVL YGI+GA+VMRA+ +G G + F PILL FA +L+FSSYKLL+EGE++E ED+ DN ++ F + L+ ++ YDG NFFTV +GV+ ATPLLLVLA +E+SD+VFAVDSIPAVF VTKDPFIVYTSN++AIL+LR LYTL+S AV +L YL+ AVA+VLGF+GAK+ E+ G +V TE SL ++ +LGGG+G SL+ E+ Sbjct: 66 KVPPERQTRVLNYGIVGALVMRAVMVGAGVELIENFQPILLVFAGILIFSSYKLLAEGEEEE-EDMGDNAIVKFVGNFLEVSEDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISKAVGELKYLQTAVALVLGFIGAKMIVEYAGVEVPTEASLAVVVTMLGGGVGASLMLPSED 278
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Match: K0TQ66_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQ66_THAOC) HSP 1 Score: 249 bits (636), Expect = 4.090e-79 Identity = 122/215 (56.74%), Postives = 169/215 (78.60%), Query Frame = 1 Query: 1 QVPFEYQDRVLTYGILGAVVMRAIFIGLGEAAMSVFHPILLGFAAVLVFSSYKLLSEG-EDDEDEDLSDNKLIAFASSALDATDSYDGANFFTVVDGVRRATPLLLVLACIELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLYTLLSSAVEDLVYLRPAVAIVLGFVGAKLGGEFFGYDVSTELSLGIITGLLGGGIGLSLIERQEE 642 QVP QDRVL +GI GA+VMRA+ IG+G AA+ F ILL FAA+LV+SS K L G ED+E+EDL+DN ++ F+ D+TD +DG+NFFT+VDGV+ ATPL + + +E+SD+VFAVDSIPAVF VT++P +V++SN++AI+ LRSLYT+LS A DL YL PAV +VLGF+G+K+ E+FG +V TE++LG++ +L GG+GLS+ ER++E Sbjct: 124 QVPLRSQDRVLNWGIYGAIVMRAVMIGVGAAALKEFRAILLVFAAILVYSSAKTLIPGDEDEEEEDLNDNAIVKFSRKLFDSTDQFDGSNFFTMVDGVKMATPLFICMIALEISDVVFAVDSIPAVFGVTENPLVVFSSNMFAIMGLRSLYTILSQAASDLKYLEPAVGVVLGFIGSKMIAEYFGTEVPTEIALGVVATVLSGGVGLSVWERRQE 338 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1643.4368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1643.4368.1 >prot_L-elsbetiae_contig1643.4368.1 ID=prot_L-elsbetiae_contig1643.4368.1|Name=mRNA_L-elsbetiae_contig1643.4368.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp QVPFEYQDRVLTYGILGAVVMRAIFIGLGEAAMSVFHPILLGFAAVLVFSback to top mRNA from alignment at L-elsbetiae_contig1643:139..1221+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1643.4368.1 ID=mRNA_L-elsbetiae_contig1643.4368.1|Name=mRNA_L-elsbetiae_contig1643.4368.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1083bp|location=Sequence derived from alignment at L-elsbetiae_contig1643:139..1221+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1643:139..1221+ >mRNA_L-elsbetiae_contig1643.4368.1 ID=mRNA_L-elsbetiae_contig1643.4368.1|Name=mRNA_L-elsbetiae_contig1643.4368.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1296bp|location=Sequence derived from alignment at L-elsbetiae_contig1643:139..1221+ (Laminarionema elsbetiae ELsaHSoW15)back to top |