mRNA_L-elsbetiae_contig16400.4352.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16400.4352.1
Unique NamemRNA_L-elsbetiae_contig16400.4352.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Match: A0A7X4IY97_9BACT (DUF4417 domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7X4IY97_9BACT)

HSP 1 Score: 245 bits (626), Expect = 2.370e-75
Identity = 123/299 (41.14%), Postives = 176/299 (58.86%), Query Frame = 1
Query:   37 LGCSQCNEQGVCGGIRPQAEVFSCRDYCCGTPDACTKVCPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDELLKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDWRIENYWAERNA-SQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIALAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATGGRYAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSNPFMKSAHRQR 930
            LGC+ C  + VCGGI   + VF C DYCC  P  C  VC R    FV R  E+ G+ LDD+ R  P + P LP+ +P++YH   R      PAVAL +  +L+    ++K++N+  L +  RVS +A L++  T  D  +E +WA      + +  +A +  A + +PNYS+ +D PRWD+LHA KRIA+ W E+ +AG+P  L VNARTA DW RW  FV +RPE+  +A E ATG RYA+R  +     +++    G  L L +RGG   +  L D++ASV  +D  PF+K+  RQR
Sbjct:   19 LGCTACPHKRVCGGIHVGSGVFDCLDYCCRVPTRCESVCDRSVDSFVDRVHEIGGFSLDDIPRTQPVSPPRLPALVPLVYHGSSRHSSFYAPAVALSLYSLLDRATGELKYSNREHLCEAFRVSTQAALLVTGTHDDRPLERWWALGPIRKKTLGQLAEIGIAAITSPNYSLFSDTPRWDDLHAQKRIAITWQEMQSAGLPAGLHVNARTAADWCRWRGFVRNRPEVSVLAFEFATGARYAKRLLWYTNHLRKLADDVGRPLTLVIRGGAAVVSQLRDSYASVCSVDPTPFIKAVKRQR 317          
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Match: A0A3M9YMB5_9SPHN (Uncharacterized protein n=4 Tax=Sphingomonadales TaxID=204457 RepID=A0A3M9YMB5_9SPHN)

HSP 1 Score: 244 bits (623), Expect = 1.680e-74
Identity = 135/331 (40.79%), Postives = 186/331 (56.19%), Query Frame = 1
Query:   37 LGCSQCNEQGVCGGIRPQAEVFSCRDYC-CGTPDACTKVCPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDELLKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDWRIENYWAERNASQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIALAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATGGRYAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSNPFMKSAHRQRV-VRSDNRICSKPSFTLVGQPVEDLLQANVRA 1023
            LGC  C ++  CGG+   A  F C DYC C     C  VC  +P  FV R REVDG E  +V R    A   LP  IP+I H   R  +L +P VALP   +L+     +++ ++ AL  +  + P ARLV+    RD +IE YWA ++   ++  +A L  A +  PNYSV+TDVPR DNLHA+KRI +A  E+  AG+PTAL  NART  D++RW   +  RPEIQ +A E ATG    ER  + +     +       L L +RGG +++  L  AFASV ++D++ F K+ +RQ    R D R+  +   TL G P++ LLQ NV A
Sbjct:   30 LGCVTCVDRPTCGGVHNGASFFDCGDYCRCEDKATCDLVCRGKPKQFVARLREVDGLEFANVPRAPRVAVEALPPMIPLIEHATARVGMLNSPIVALPFYALLDIDVGTLRYPDRAALSQKFGIDPNARLVVSGVARDKKIERYWAAKDRPAMLQQLAALDIALITPPNYSVLTDVPRTDNLHAMKRILMATVEMMQAGLPTALHANARTERDYERWGELIADRPEIQYLAFEFATGAGRGERLDWHVAQLTALASRVPQPLGLVVRGGMRALEPLRAAFASVTMIDTDAFAKTCYRQAAQFRPDGRLVWRKHPTLPGAPIDALLQQNVAA 360          
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Match: UPI001F4DD52B (DUF4417 domain-containing protein n=1 Tax=Erythrobacter sp. LQ02-29 TaxID=2920384 RepID=UPI001F4DD52B)

HSP 1 Score: 242 bits (618), Expect = 9.420e-74
Identity = 133/332 (40.06%), Postives = 188/332 (56.63%), Query Frame = 1
Query:   28 SARLGCSQCNEQGVCGGIRPQAEVFSCRDYC-CGTPDACTKVCPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDELLKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDWRIENYWAERNASQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIALAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATGGRYAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSNPFMKSAHRQRV-VRSDNRICSKPSFTLVGQPVEDLLQANV 1017
            S  LGC  C ++ +CGG    A VF C DYC C     C  VC  +P  FV R REVDG EL +V R        LP  +P+I H   R   L +P VALP+  +L+     ++++++ AL  +  + P ARLV+    RD +IE YW+ +N   ++ A+A L  A +  PN+SV+TDVPR DNLHA+KRI +A  E+  AG+PTAL  NART  D++RW   +  RPEIQ +A E ATG    ER  + +     +   A   L L +RGG +++  L   FASV ++D++ F K+ +RQ    R D ++  +   T  G P++ LLQ NV
Sbjct:   27 SCSLGCVTCIDRAICGGAHNGASVFDCSDYCRCEDKATCDLVCRGKPKQFVARLREVDGLELANVPRAQVVPIAALPPMVPLIEHATARVGRLNSPIVALPLYALLDIETGTLRYSDRAALSKKFGIDPNARLVVSGVARDRKIERYWSAKNRPAMLQALAALDIALITPPNFSVLTDVPRTDNLHAMKRILIATVEMMQAGLPTALHPNARTERDYERWGDLIAERPEIQYLAFEFATGAGRGERLDWHVAQLTALAARAPQPLGLVVRGGIRALEPLRAVFASVTMIDTDAFAKTCYRQAAHFRPDGKLVWRKHPTPPGAPIDALLQQNV 358          
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Match: UPI001F1A6C91 (hypothetical protein n=1 Tax=Zavarzinia compransoris TaxID=1264899 RepID=UPI001F1A6C91)

HSP 1 Score: 242 bits (617), Expect = 2.670e-73
Identity = 137/340 (40.29%), Postives = 186/340 (54.71%), Query Frame = 1
Query:   10 WERPEDSA-RLGCSQCNEQGVCGGIRPQAEVFSCRDYC-CGTPDACTKVCPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDELLKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDWRIENYWAERNASQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIALAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATGGRYAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSNPFMKSAHRQRVVRSDN-RICSKPSFTLVGQPVEDLLQANVR 1020
            W+ P   A  LGC  C E   CGG+   A V  CRD C C     C  VC   P  FV R REV G   +   RV     P+LP  +P + H+Y R   L  P VAL +  V+N     +   ++ AL DR  + P A +VL    +D  IE +W   N  +++  +ARL  A +  PNYSV+TDVPR DNLHA+KRI LAW+E++AAG P AL +NART HD+ RW   V  RPEI+ +A E ATGG   ER  + +     +    G  L L +RGG +   LL   FA V L+++  F ++  R+R V +++ R+    S TL G P++DL+  NV+
Sbjct:   20 WDYPTRHAPSLGCPTCLEFSRCGGVHTDAGVLDCRDLCSCRDKSRCDMVCRFNPRVFVARMREVGGLSFETAPRVPVCGVPDLPRVVPFVDHRYGRASTLNEPVVALSLYEVVNMATGALHVTSRQALGDRFLIPPNATVVLSGVDKDGPIERWWELPNRQEILAGLARLGVAVVTTPNYSVLTDVPRTDNLHAMKRILLAWTEMAAAGFPAALHINARTDHDYRRWGELVAKRPEIEILAFEFATGGGRGERIDWHVEQLCNLADRVGRPLTLMIRGGGRKAALLRRHFAHVTLIETEAFARAIRRRRAVLTESGRLRWASSPTLKGAPIDDLVAHNVK 359          
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Match: T0J4Q0_9SPHN (Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 TaxID=1331060 RepID=T0J4Q0_9SPHN)

HSP 1 Score: 239 bits (609), Expect = 1.980e-72
Identity = 132/338 (39.05%), Postives = 191/338 (56.51%), Query Frame = 1
Query:   22 EDSAR----LGCSQCNEQGVCGGIRPQAEVFSCRDYC-CGTPDACTKVCPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDELLKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDWRIENYWAERNASQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIALAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATGGRYAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSNPFMKSAHRQRVVRSD-NRICSKPSFTLVGQPVEDLLQANV 1017
            +D+AR    LGC  C ++ +CGG+   A  F C DYC C   +AC  VC   PA +V R REV  ++L    R        LPS +P+I H   R   L  P VALP+  +++     ++F ++ AL  +  + P ARLV+    RD RIE YWA  N   L+  +A L  A +  PN+SV+T VPR DNLHA+KRI L W E++  GIPTAL +NART  D++RW   + +RPEI  +A+E ATG     R  + +    E+       LRL LRGG + +  L  +FA+V ++D++ F KS  R++   ++  ++  +   T  G+P++DLLQ NV
Sbjct:   22 DDAARAPASLGCWTCVDKEICGGVHSGASFFDCNDYCRCPDKNACDLVCRGNPATYVARYREVGTFDLMKAPRAPEVGVASLPSMVPLIEHNSARHARLNFPMVALPLHKLVDLDKGVLRFRDREALATQFGIDPHARLVVSGVARDRRIERYWALPNRPALLKQLAALNIALLTPPNFSVLTGVPRSDNLHAMKRIMLVWVEMAQTGIPTALHINARTERDYERWAELIETRPEISCLAVEFATGAGRGSRIDWHVARLTELAAHVSRPLRLVLRGGGRVLEPLRQSFATVTMIDTDAFTKSRCRKQAYFTEAGKLMWRSHPTAEGEPIDDLLQHNV 359          
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Match: UPI00082EBF78 (DUF4417 domain-containing protein n=1 Tax=Croceicoccus bisphenolivorans TaxID=1783232 RepID=UPI00082EBF78)

HSP 1 Score: 238 bits (606), Expect = 5.890e-72
Identity = 132/331 (39.88%), Postives = 184/331 (55.59%), Query Frame = 1
Query:   37 LGCSQCNEQGVCGGIRPQAEVFSCRDYC-CGTPDACTKVCPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDELLKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDWRIENYWAERNASQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIALAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATGGRYAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSNPFMKSAHRQRV-VRSDNRICSKPSFTLVGQPVEDLLQANVRA 1023
            LGC  C ++ +CGG    A  F C DYC C   +AC  VC   P  FV R REV+G EL +  R        LP  +P+I H   R   L +P VALP+  +L+     +++ N+ AL  +  + P ARLV+    RD RIE YWA  +   +++ +A L  A +  PNYSV+TDVPR DN+HA+KRI LA  E+   G+PTAL VNART  D++RW   +  RPEIQ +A E ATG    ER  + +     +       L L +RGG +++  L  AFA+V ++D++ F K+  RQ    R D ++  +   T  G P++ LLQ NV A
Sbjct:   30 LGCVSCVDRPICGGAHNSASFFDCGDYCRCKDKEACDLVCRGNPKQFVERLREVNGLELKNAPRAPIVPIEALPPMVPLIEHATARVGTLNSPIVALPLYALLDIDTDTLRYPNRAALSQKFGIDPNARLVISGVARDRRIERYWAATDRDAMLEQLAALDIALITPPNYSVLTDVPRTDNMHAMKRILLAAVEMMQVGLPTALHVNARTERDYERWAELIAERPEIQCLAFEFATGTGRGERLDWHVAQLTALAARVPQPLGLVVRGGIRALEPLRAAFAAVTMIDTDAFTKTRCRQEAQFRHDGKLVWRKHPTPRGAPIDALLQQNVAA 360          
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Match: UPI001BB28D27 (DUF4417 domain-containing protein n=1 Tax=Sphingopyxis sp. 2PD TaxID=2502196 RepID=UPI001BB28D27)

HSP 1 Score: 234 bits (598), Expect = 1.560e-70
Identity = 127/339 (37.46%), Postives = 194/339 (57.23%), Query Frame = 1
Query:   10 WERPED-SARLGCSQCNEQGVCGGIRPQAEVFSCRDYC-CGTPDACTKVCPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDELLKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDWRIENYWAERNASQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIALAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATGGRYAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSNPFMKSAHRQRVVRSDNRICSKPSF-TLVGQPVEDLLQANV 1017
            W+  E  SA LGC  C ++G CGG    +  F C DYC C    +C  VC   PA FV R RE+ G++L    R    +   LPS +P+I H   R   L  P VA+P+  +++   + +KF ++ A+ ++  ++  AR+V+   GRD  IE YW   N ++L+  +  L  A +  PN+SV+T+VPR DNLHA+KRI LAW E++ AG+P AL VNART  D+ RW   + +RPEIQ+IA+E ATG     R  + +   +++       LRL +RGG + +  L  +F +V ++D++ F K+  R++   +++      S  T  G+P++ LLQ NV
Sbjct:   20 WDDAETASASLGCWTCVDRGTCGGAHKDSSFFDCNDYCRCADKASCDLVCRGNPAAFVARWREIGGFDLATARRAPEISVDPLPSMVPLIEHNSARHGRLNFPIVAIPLYALIDLGNASLKFKDREAIANQFGIASEARIVVSGVGRDSDIERYWGLPNRAELLGQLQSLGIALITPPNFSVLTNVPRTDNLHAMKRILLAWLEMAEAGLPAALHVNARTERDYQRWAELIAARPEIQSIAVEFATGAGRGSRIDWHVARLRQLAAVVNRPLRLMVRGGARVLEPLRQSFDAVTVIDTDAFHKTRCRKQAYFTESGKLHWHSHPTAAGEPLDGLLQQNV 358          
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Match: A0A437J3Y1_9SPHN (DUF4417 domain-containing protein n=5 Tax=Sphingomonadales TaxID=204457 RepID=A0A437J3Y1_9SPHN)

HSP 1 Score: 234 bits (596), Expect = 1.840e-70
Identity = 131/331 (39.58%), Postives = 182/331 (54.98%), Query Frame = 1
Query:   37 LGCSQCNEQGVCGGIRPQAEVFSCRDYC-CGTPDACTKVCPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDELLKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDWRIENYWAERNASQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIALAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATGGRYAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSNPFMKSAHRQRV-VRSDNRICSKPSFTLVGQPVEDLLQANVRA 1023
            LGC  C +  +CGG    A  F C DYC C     C  VC   P  FV R REV+G +L +  R    +   LP  +P+I H   R   L +P VALP+  +L+  A  +++ ++ AL  +  + P ARLV+    RD RIE YWA  +   +++ +A L  A +  PNYSV+TDVPR DN+HA+KRI LA  E+  AG+PTAL VNART  D+ RW   +  RPEIQ +A E ATG    ER  + +     +       L L +RGG +++  L  AFA+V ++D++ F K+  RQ    R D  +  +   T  G P++ LLQ NV A
Sbjct:   30 LGCVSCVDHPICGGAHNSASFFDCSDYCRCNDKATCDLVCRGNPKQFVERLREVNGLDLKNAPRAPIVSIEALPPMVPLIEHSTARVGTLNSPIVALPLHALLDINAGTLRYHDRDALSQKFGIDPNARLVISGVARDRRIERYWAATDRDAMLEQLAALDIALITPPNYSVLTDVPRTDNMHAMKRILLAAIEMMQAGLPTALHVNARTERDYKRWAELIAERPEIQWLAFEFATGTGRGERLDWHVAQLTALAARVPQPLGLVVRGGMRALEPLRAAFAAVTMIDTDAFTKTRCRQEAQFRPDGILVWRKHPTPRGAPIDALLQQNVAA 360          
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Match: UPI0003A97DCC (DUF4417 domain-containing protein n=1 Tax=Rhizobium sp. (strain BR816) TaxID=1057002 RepID=UPI0003A97DCC)

HSP 1 Score: 233 bits (593), Expect = 1.110e-69
Identity = 133/343 (38.78%), Postives = 185/343 (53.94%), Query Frame = 1
Query:    4 QHWERPEDSA-RLGCSQCNEQGVCGGIRPQAEVF-SCRDYC-CGTPDACTKVCPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDELLKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDWRIENYWAERNASQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIALAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATGGRYAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSNPFMKSAHRQRVVRSD-NRICSKPSFTLVGQPVEDLLQANVR 1020
            Q W+ P   A  LGC  C + GVCGG+  +A +F  C D C C     C  VC   PA FV R RE+DG+EL  + R      P LP  +P I+H+Y R   L  P VA+P+  +++  + ++    +  L  R  V   A +V+    +D  IE +W   N   LI  +  L    + APNYSV+TDVPR DNLHA+KRI + WSE +AAG+P AL VNART HD+ RW   +  RPEI  +A E ATG    ER A+       +    G  L + +RGG   +P L  AF  V LL+++ F ++  R+R    +  R+   PS T +G  +++LL  NV+
Sbjct:   18 QLWDDPAVHAPALGCRGCRDFGVCGGLHTEAGIFLDCHDLCTCSDKSKCDMVCRFNPAHFVARMREIDGFELSKLPRFEELPVPSLPPVVPFIHHKYSRAMPLNEPVVAIPLCELVDLGSGQLHVRTRGELSARFLVPAEASIVVSGVDKDRIIERWWELDNRPALIAQLRELGLTMVTAPNYSVLTDVPRTDNLHAMKRIFMVWSEFTAAGLPAALHVNARTEHDYSRWAALIRERPEIGVVAFEFATGCGRGERIAFHTSQLMSLARRVGRPLDIVVRGGLHVLPQLTQAFRRVTLLETHSFSRTQRRRRAYFDEAGRLHWAPSPTEIGASLDELLAHNVK 360          
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Match: A0A538RWX7_9BACT (DUF4417 domain-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A538RWX7_9BACT)

HSP 1 Score: 228 bits (581), Expect = 1.350e-68
Identity = 125/338 (36.98%), Postives = 193/338 (57.10%), Query Frame = 1
Query:   28 SARLGCSQCNEQGVCGGIRPQAEVFSCRDYC-CGTPDA--CTKVCPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDELLKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDWRIENYWAERNASQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIALAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATG----GRYAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSNPFMKSAHRQRVVRSDNRICS-KPSFTLVGQPVEDLLQANV 1017
            +A LGC+QC +   CGG++   ++F C   C C   D   C  VCP  P  F  R REV GWEL+ V      +AP LP+ +P+I +   R       AVA+P+  +   RA+ ++F++   L    +++P  ++V+D  G D  +E+YW +   +     ++RL PA +  PN+S+ TDVPR DNLH++KRIA+ W EL+A G+PTA+ +NART  DWDRWT F+   PEI  +A E  +G    GR +   A ++G A+++       + L  RGGR+ +  L  AF  +  + ++PF+++  R R+V    R    +  +TL  QP++DLL+ NV
Sbjct:   13 TACLGCAQCPDFQHCGGLKVLRQMFDCSALCRCPVADRAQCKIVCPNNPRHFAARLREVGGWELN-VGATPTVSAPRLPTLVPLIKNGSCRVRDFSAEAVAVPLAKLFTSRAAALRFSSHEELCKYFKLAPNTKIVIDSIGYDQSLEHYWGKARGAGFPKDLSRLSPALITVPNFSLFTDVPRHDNLHSMKRIAICWHELAALGLPTAIHLNARTDRDWDRWTQFLKEHPEIGILAFEFTSGSAAPGRASWHSAKLIGLARDLARP----MTLVCRGGRQQLANLSGAFDQIVQISADPFVRTMKRSRLVYCPGRRARWERLWTLERQPLDDLLEENV 345          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16400.4352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X4IY97_9BACT2.370e-7541.14DUF4417 domain-containing protein n=2 Tax=Bacteria... [more]
A0A3M9YMB5_9SPHN1.680e-7440.79Uncharacterized protein n=4 Tax=Sphingomonadales T... [more]
UPI001F4DD52B9.420e-7440.06DUF4417 domain-containing protein n=1 Tax=Erythrob... [more]
UPI001F1A6C912.670e-7340.29hypothetical protein n=1 Tax=Zavarzinia compransor... [more]
T0J4Q0_9SPHN1.980e-7239.05Uncharacterized protein n=1 Tax=Sphingobium lactos... [more]
UPI00082EBF785.890e-7239.88DUF4417 domain-containing protein n=1 Tax=Croceico... [more]
UPI001BB28D271.560e-7037.46DUF4417 domain-containing protein n=1 Tax=Sphingop... [more]
A0A437J3Y1_9SPHN1.840e-7039.58DUF4417 domain-containing protein n=5 Tax=Sphingom... [more]
UPI0003A97DCC1.110e-6938.78DUF4417 domain-containing protein n=1 Tax=Rhizobiu... [more]
A0A538RWX7_9BACT1.350e-6836.98DUF4417 domain-containing protein (Fragment) n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16400contigL-elsbetiae_contig16400:329..1363 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score241.1
Seed ortholog evalue7.6e-61
Seed eggNOG ortholog1331060.RLDS_05730
Hectar predicted targeting categoryother localisation
EggNOG OGs1NXGR@1224,2CKI7@1,2KAA5@204457,2V649@28211,32X20@2
Best tax levelSphingomonadales
Best eggNOG OGNA|NA|NA
Exons1
Model size1035
Cds size1035
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815677.971335-CDS-L-elsbetiae_contig16400:328..13631622815677.971335-CDS-L-elsbetiae_contig16400:328..1363Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16400 329..1363 +
1691683032.2889316-CDS-L-elsbetiae_contig16400:328..13631691683032.2889316-CDS-L-elsbetiae_contig16400:328..1363Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16400 329..1363 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16400.4352.1prot_L-elsbetiae_contig16400.4352.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16400 329..1363 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16400.4352.1

>prot_L-elsbetiae_contig16400.4352.1 ID=prot_L-elsbetiae_contig16400.4352.1|Name=mRNA_L-elsbetiae_contig16400.4352.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=345bp
RQHWERPEDSARLGCSQCNEQGVCGGIRPQAEVFSCRDYCCGTPDACTKV
CPRRPADFVMRRREVDGWELDDVSRVSPTAAPELPSSIPVIYHQYKRDEL
LKTPAVALPMRIVLNDRASKVKFANKTALLDRLRVSPRARLVLDFTGRDW
RIENYWAERNASQLIDAIARLRPAWMIAPNYSVITDVPRWDNLHAIKRIA
LAWSELSAAGIPTALPVNARTAHDWDRWTTFVLSRPEIQAIALELATGGR
YAERRAYMLGCAKEMGMAAGGRLRLFLRGGRKSIPLLEDAFASVHLLDSN
PFMKSAHRQRVVRSDNRICSKPSFTLVGQPVEDLLQANVRASSF*
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mRNA from alignment at L-elsbetiae_contig16400:329..1363+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16400.4352.1 ID=mRNA_L-elsbetiae_contig16400.4352.1|Name=mRNA_L-elsbetiae_contig16400.4352.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1035bp|location=Sequence derived from alignment at L-elsbetiae_contig16400:329..1363+ (Laminarionema elsbetiae ELsaHSoW15)
CGACAGCACTGGGAGCGACCGGAAGATTCCGCGCGTCTCGGATGCTCCCA ATGCAACGAGCAGGGCGTGTGCGGCGGGATCCGACCTCAGGCGGAAGTGT TCTCGTGCCGTGACTATTGCTGCGGCACTCCCGACGCCTGCACCAAGGTG TGCCCTAGGCGTCCGGCTGACTTCGTCATGCGAAGGCGCGAAGTGGACGG CTGGGAGCTCGATGACGTCTCTCGCGTGTCTCCGACCGCGGCGCCAGAGT TGCCGTCTTCGATCCCGGTCATCTACCACCAGTACAAGCGCGACGAACTC CTCAAGACGCCCGCCGTAGCGCTTCCGATGCGGATCGTTCTCAACGATCG CGCCTCAAAGGTAAAGTTTGCGAACAAGACCGCGCTGCTCGATCGCCTCC GTGTCTCTCCCCGCGCCAGATTGGTGCTGGACTTCACCGGCCGCGACTGG CGGATCGAGAACTACTGGGCCGAGCGGAACGCATCGCAGCTCATCGACGC GATCGCCCGCCTTCGCCCCGCGTGGATGATCGCTCCGAACTACAGCGTCA TCACCGATGTCCCGCGGTGGGACAATCTGCACGCGATCAAGCGGATCGCA CTTGCCTGGTCGGAGTTGTCGGCCGCCGGGATTCCAACAGCGCTTCCGGT CAACGCGCGGACCGCGCACGACTGGGACCGTTGGACGACTTTTGTTCTGT CAAGACCAGAGATTCAGGCGATCGCACTCGAACTCGCGACGGGTGGGCGC TACGCAGAACGGCGGGCGTACATGCTGGGATGTGCCAAAGAGATGGGGAT GGCGGCCGGAGGACGGCTGCGGCTCTTCCTGCGCGGGGGGCGGAAGAGCA TCCCGCTGCTGGAGGATGCCTTCGCTTCCGTACATCTGCTCGATTCGAAT CCTTTCATGAAATCCGCCCATCGGCAGCGTGTAGTTCGAAGTGACAACCG TATCTGCTCAAAGCCATCATTCACGCTCGTCGGGCAGCCGGTCGAAGATC TGTTACAAGCCAACGTGAGAGCTTCCTCGTTCTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16400:329..1363+

>mRNA_L-elsbetiae_contig16400.4352.1 ID=mRNA_L-elsbetiae_contig16400.4352.1|Name=mRNA_L-elsbetiae_contig16400.4352.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2070bp|location=Sequence derived from alignment at L-elsbetiae_contig16400:329..1363+ (Laminarionema elsbetiae ELsaHSoW15)
CGACAGCACTGGGAGCGACCGGAAGATTCCGCGCGTCTCGGATGCTCCCA
ATGCAACGAGCAGGGCGTGTGCGGCGGGATCCGACCTCAGGCGGAAGTGT
TCTCGTGCCGTGACTATTGCTGCGGCACTCCCGACGCCTGCACCAAGGTG
TGCCCTAGGCGTCCGGCTGACTTCGTCATGCGAAGGCGCGAAGTGGACGG
CTGGGAGCTCGATGACGTCTCTCGCGTGTCTCCGACCGCGGCGCCAGAGT
TGCCGTCTTCGATCCCGGTCATCTACCACCAGTACAAGCGCGACGAACTC
CTCAAGACGCCCGCCGTAGCGCTTCCGATGCGGATCGTTCTCAACGATCG
CGCCTCAAAGGTAAAGTTTGCGAACAAGACCGCGCTGCTCGATCGCCTCC
GTGTCTCTCCCCGCGCCAGATTGGTGCTGGACTTCACCGGCCGCGACTGG
CGGATCGAGAACTACTGGGCCGAGCGGAACGCATCGCAGCTCATCGACGC
GATCGCCCGCCTTCGCCCCGCGTGGATGATCGCTCCGAACTACAGCGTCA
TCACCGATGTCCCGCGGTGGGACAATCTGCACGCGATCAAGCGGATCGCA
CTTGCCTGGTCGGAGTTGTCGGCCGCCGGGATTCCAACAGCGCTTCCGGT
CAACGCGCGGACCGCGCACGACTGGGACCGTTGGACGACTTTTGTTCTGT
CAAGACCAGAGATTCAGGCGATCGCACTCGAACTCGCGACGGGTGGGCGC
TACGCAGAACGGCGGGCGTACATGCTGGGATGTGCCAAAGAGATGGGGAT
GGCGGCCGGAGGACGGCTGCGGCTCTTCCTGCGCGGGGGGCGGAAGAGCA
TCCCGCTGCTGGAGGATGCCTTCGCTTCCGTACATCTGCTCGATTCGAAT
CCTTTCATGAAATCCGCCCATCGGCAGCGTGTAGTTCGAAGTGACAACCG
TATCTGCTCAAAGCCATCATTCACGCTCGTCGGGCAGCCGGTCGAAGATC
TGTTACAAGCCAACGTGAGAGCTTCCTCGTTCTAGCGACAGCACTGGGAG
CGACCGGAAGATTCCGCGCGTCTCGGATGCTCCCAATGCAACGAGCAGGG
CGTGTGCGGCGGGATCCGACCTCAGGCGGAAGTGTTCTCGTGCCGTGACT
ATTGCTGCGGCACTCCCGACGCCTGCACCAAGGTGTGCCCTAGGCGTCCG
GCTGACTTCGTCATGCGAAGGCGCGAAGTGGACGGCTGGGAGCTCGATGA
CGTCTCTCGCGTGTCTCCGACCGCGGCGCCAGAGTTGCCGTCTTCGATCC
CGGTCATCTACCACCAGTACAAGCGCGACGAACTCCTCAAGACGCCCGCC
GTAGCGCTTCCGATGCGGATCGTTCTCAACGATCGCGCCTCAAAGGTAAA
GTTTGCGAACAAGACCGCGCTGCTCGATCGCCTCCGTGTCTCTCCCCGCG
CCAGATTGGTGCTGGACTTCACCGGCCGCGACTGGCGGATCGAGAACTAC
TGGGCCGAGCGGAACGCATCGCAGCTCATCGACGCGATCGCCCGCCTTCG
CCCCGCGTGGATGATCGCTCCGAACTACAGCGTCATCACCGATGTCCCGC
GGTGGGACAATCTGCACGCGATCAAGCGGATCGCACTTGCCTGGTCGGAG
TTGTCGGCCGCCGGGATTCCAACAGCGCTTCCGGTCAACGCGCGGACCGC
GCACGACTGGGACCGTTGGACGACTTTTGTTCTGTCAAGACCAGAGATTC
AGGCGATCGCACTCGAACTCGCGACGGGTGGGCGCTACGCAGAACGGCGG
GCGTACATGCTGGGATGTGCCAAAGAGATGGGGATGGCGGCCGGAGGACG
GCTGCGGCTCTTCCTGCGCGGGGGGCGGAAGAGCATCCCGCTGCTGGAGG
ATGCCTTCGCTTCCGTACATCTGCTCGATTCGAATCCTTTCATGAAATCC
GCCCATCGGCAGCGTGTAGTTCGAAGTGACAACCGTATCTGCTCAAAGCC
ATCATTCACGCTCGTCGGGCAGCCGGTCGAAGATCTGTTACAAGCCAACG
TGAGAGCTTCCTCGTTCTAG
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