mRNA_L-elsbetiae_contig164.4346.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig164.4346.1
Unique NamemRNA_L-elsbetiae_contig164.4346.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Match: D7FR34_ECTSI (4HBT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR34_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 7.760e-101
Identity = 174/259 (67.18%), Postives = 197/259 (76.06%), Query Frame = 1 
Query:  298 ATPISSERRELRRVALAHLVKSTAVNARGQDALGRERSSXXXXXXXXXXDVGSTAAIA--LLRLGEGAGEGGGDAMEGRDGETQLLPPNVYDVDRILAKTPLLKNDNAFHDTLNNDDAISCPYVLTRQGGEGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQGTGAVVTAYIKVDYKAPLPCLTTAIVDITVDRKEGRKLFVTGRLKSLDGAVTYSSAEALFIKPREAAAGAPGGAGAGSSGLLQGVVV 1068
            A  +SSE+RELRRVALAHL KS    A   D L  +              VG T A+A  LLR GE   E    ++ G +G+T  LPPNV+DVD+IL KTPLL+NDNAFHDTLNND  ISCP+VL R   +GEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQ TGAV TAYIKVD+KAPLPCLTTA+VDITVDRKEGRKL+VTGRLKSLDG VT+SSAEALF+KP+EA++G   G     S LL+G+VV
Sbjct:    5 AASMSSEKRELRRVALAHLTKSVRAGA-VNDNLKNQSQDSTVGAYEEGGGVGGTVALAAALLRPGESEDEEANQSVGG-EGDTVPLPPNVHDVDKILVKTPLLRNDNAFHDTLNNDSGISCPFVLNRPDQDGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQNTGAVFTAYIKVDFKAPLPCLTTAVVDITVDRKEGRKLYVTGRLKSLDGTVTFSSAEALFVKPKEASSGGGEGRDGEPSELLRGLVV 261
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BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Match: A0A835YMX9_9STRA (HotDog domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMX9_9STRA)

HSP 1 Score: 165 bits (418), Expect = 5.720e-43
Identity = 76/149 (51.01%), Postives = 107/149 (71.81%), Query Frame = 1 
Query:  559 VYDVDRILAKTPLLKNDNAFHDTLNNDDAISCPYVLTRQGGEGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQGTGAVVTAYIKVDYKAPLPCLTTAIVDITVDRKEGRKLFVTGRLKSLDGAVTYSSAEALFIKPREA 1005
            + DVDR+LA  P  K D+ FHDTLN+   + CPYV   +  +   ++AVVRFG+   GHP +VHGG+T+LTFDNL G   FL+G  AV+TAY+ VD+KAPLP  T  +V++ +DR+EGRKLF+ G + SLDG +TY++  +LF+ P++A
Sbjct:   95 LLDVDRLLATNPAYKRDHVFHDTLNHYQGVQCPYVTYDR--DSNSLKAVVRFGEQTRGHPNLVHGGITSLTFDNLLGWLQFLEGRMAVLTAYLHVDFKAPLPTTTQTMVEVKMDRQEGRKLFMVGAIMSLDGNITYATCTSLFVIPKDA 241
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BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Match: A0A836CB13_9STRA (HotDog domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB13_9STRA)

HSP 1 Score: 147 bits (372), Expect = 6.450e-38
Identity = 69/148 (46.62%), Postives = 101/148 (68.24%), Query Frame = 1 
Query:  559 VYDVDRILAKTPLLKNDNAFHDTLNNDDAISCPYVLTRQGGEGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQGTGAVVTAYIKVDYKAPLPCLTTAIVDITVDRKEGRKLFVTGRLKSLDGAVTYSSAEALFIKPRE 1002
            ++DV  +L + P    D+  HDTLN    + CP V       G  ++AVVRFG+   GHP +VHGG+TALTFDNL G  +F+ G   V+TAY+ VD+KAPLP  TT + ++ +DR+EGRKLF +G +++LDG++T+++  +LFI PR+
Sbjct:    1 LHDVTDLLRRYPEYWRDHVLHDTLNYRHGVQCPVVS--HDSAGCRLQAVVRFGQQTRGHPDLVHGGITALTFDNLQGWCMFMDGRTNVLTAYLHVDFKAPLPTHTTVLAEVRIDRQEGRKLFASGTIRTLDGSITFATCSSLFIIPRD 146
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BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Match: A0A5B8MHE1_9CHLO (4HBT domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MHE1_9CHLO)

HSP 1 Score: 90.9 bits (224), Expect = 7.980e-17
Identity = 55/164 (33.54%), Postives = 88/164 (53.66%), Query Frame = 1 
Query:  535 ETQLLPPNVYDVDRILAKTPLLKNDNAFHDTLNNDDAISCPYVLTRQGGEGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQGT-------GAVVTAYIKVDYKAPLPCLTTAIV-DITVDRKEGRKLFVTGRLKSLDGAVTYSSAEALFIKPRE 1002
            ET+     + D  + L  TP  K   A+H+TL  ++ +S   + + +  E   +  V R G S+ GH  IVHGG+ A+ FD+LFG   F   +       G   TA + V+Y+ P+PC    +V +  +DR EGRK++++G   S +G + Y+ + ALFI  R+
Sbjct:   73 ETRKSLGGIKDTMKRLDGTPAYKRMGAWHNTLKGEEMVSELELYSDE--ENGSVAGVYRIGCSLCGHSGIVHGGIIAMGFDDLFGTCYFRNRSRVNHEELGPGFTANLDVNYRKPMPCGKGKVVFNARIDRVEGRKVYLSGFATSENGQIKYADSTALFIAARK 234
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BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Match: A0A7S3C7J7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C7J7_9CHLO)

HSP 1 Score: 86.7 bits (213), Expect = 2.310e-15
Identity = 50/150 (33.33%), Postives = 78/150 (52.00%), Query Frame = 1 
Query:  580 LAKTPLLKNDNAFHDTLNNDDAISCPYVLTRQGGEGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALF--------LQGTGAVVTAYIKVDYKAPLPCLTTAIVDIT-VDRKEGRKLFVTGRLKSLDGAVTYSSAEALFIKPRE 1002
            L  TP  K   A+H TL  DD +    + T +      +  V + G ++ GH  ++HGG+ A+ FD+LFG   F            G   TA + V+Y+ P+PC    +V +  +DR EGRK++++G   S DG V ++ + ALFI  R+
Sbjct:   89 LPSTPAYKKTGAWHKTLRGDDTVRELELFTDEATGA--VAGVYQLGCALCGHRGLIHGGIIAMGFDDLFGTCYFRNRPRVDHANNYGPGFTANLDVNYRRPMPCDRGEVVFVAKIDRVEGRKVWLSGEAYSADGKVKFADSTALFIATRK 236
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BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Match: A0A7D9LEU6_PARCT (4HBT domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LEU6_PARCT)

HSP 1 Score: 81.3 bits (199), Expect = 1.210e-13
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 1 
Query:  694 IEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQGTGAVVTAYIKVDYKAPLPCLTTAIVDITVDRKEGRKLFVTGRLKSLDGAVTYSSAEALFIKP 996
            I+AVV+FG    G   +VHGG  A   D   G      G  ++ TA + V YK P+P  TT +V+  +D+ EGRK+FV+G +K++DG   YS+A ++FI P
Sbjct:  120 IKAVVQFGLYTRGPVGLVHGGAIATILDVAMGNCAIYSGYRSI-TANLNVYYKRPIPLNTTTLVEAKIDKIEGRKVFVSGAIKTVDGCAIYSTATSIFIMP 219
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BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Match: A0A6J0TZL6_9SAUR (acyl-coenzyme A thioesterase THEM4-like n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0TZL6_9SAUR)

HSP 1 Score: 81.3 bits (199), Expect = 2.270e-13
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = 1 
Query:  526 RDGETQLLPP--NVYDV-DRILAKTPLLKNDNAFHDTLNN--DDAISCPYVLTRQGGEGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQGTGAVVTAYIKVDYKAPLPCLTTAIVDITVDRKEGRKLFVTGRLKSLDGAVTYSSAEALFI 990
            +DG  + LP   NV +V    L + P +  D      L N  ++ +   Y +     E   + ++V+FG  + G P   HGG  A   D++ G+ L L   G V+TA + ++YK+P+P     +V+  +DR EGRK+FVTG ++S DG   ++ AE LFI
Sbjct:   90 KDGTWRKLPSYRNVIEVVPEKLKQVPHMLKDRGTRLFLRNIDEEGMGFEYAMFLNPSEKR-LVSMVQFGPYLEGPPGCAHGGSIATILDSVLGV-LALCVVGRVMTANLNINYKSPVPLGPAVLVESKLDRTEGRKVFVTGEIRSHDGQTLHAEAEGLFI 247
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BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Match: A0A4P9ZPT6_9FUNG (HotDog domain-containing protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZPT6_9FUNG)

HSP 1 Score: 75.1 bits (183), Expect = 1.450e-12
Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 1 
Query:  715 GKSIAGHPKIVHGGVTALTFDNLFGMALF--LQGTGAVVTAYIKVDYKAPLPCLTTAIVDITVDRKEGRKLFVTGRLKSLDGAVTYSSAEALFIKPR 999
            G+S+ GH  I+HGG+ A   D  F    F  L G     TA + VDY++P+P     ++ I++DR +GRK+F+  R+ SLDG  T+  + +L+I PR
Sbjct:   26 GRSLCGHDGIIHGGLLATIVDEAFARLAFAFLPGHSGF-TANLNVDYRSPVPADIMVVLVISIDRVDGRKVFLKARMSSLDGKFTFLESTSLYIAPR 121
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BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Match: UPI00101A156E (acyl-coenzyme A thioesterase THEM4 n=1 Tax=Eptesicus fuscus TaxID=29078 RepID=UPI00101A156E)

HSP 1 Score: 79.0 bits (193), Expect = 4.980e-12
Identity = 52/168 (30.95%), Postives = 82/168 (48.81%), Query Frame = 1 
Query:  529 DGETQLLPPNVY-DVDRILAKTPLLKNDNAFHDTLNNDDAISCPYVLTRQGGEGEGIEAVVRF-------------GKSIAGHPKIVHGGVTALTFDNLFGMALFLQGTGAVVTAYIKVDYKAPLPCLTTAIVDITVDRKEGRKLFVTGRLKSLDGAVTYSSAEALFI 990
            DG   LLP   Y    R    +P +         L N + +S   + TR   +G G E V+ +             G  + G P   HGG TA   D+  GM   + G G V+TA + +++K P+P  +T +++  +D+ EGRKLFV+  ++S+D  + Y+ A +LFI
Sbjct:  186 DGSWILLPSYEYISTQRRQDVSPFIHAYFPTASELVNKEKLSQAQLFTRSFEDGLGFEYVMFYNEAEKRIVCVFQGGPHLQGMPGFFHGGATATMIDSTVGMNAIVSG-GIVMTANLNINFKRPIPLCSTVLINSQLDKMEGRKLFVSCNVQSVDEKILYTEATSLFI 352
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BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Match: A0A7J7TWT4_PIPKU (Thioesterase superfamily member 4 n=2 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J7TWT4_PIPKU)

HSP 1 Score: 77.0 bits (188), Expect = 5.630e-12
Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 1 
Query:  637 DDAISCPYVLTRQGGEGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQGTGAVVTAYIKVDYKAPLPCLTTAIVDITVDRKEGRKLFVTGRLKSLDGAVTYSSAEALFI 990
            +D +   YV+     E   I  V + G  + G P   HGG TA   D   GM   + G G V+TA + +++K+P+P  +T +V+  +D+ EGRKLFV+ +++S+D  + Y+ A +LFI
Sbjct:  117 EDGMGFEYVMFYNEAEKR-IVCVFQGGPHLQGMPGFFHGGATATIIDATVGMNAIVSG-GIVMTANLNINFKSPIPLCSTVLVNSQLDKIEGRKLFVSCKVQSIDEKILYTEATSLFI 232
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig164.4346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR34_ECTSI7.760e-10167.184HBT domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YMX9_9STRA5.720e-4351.01HotDog domain-containing protein n=1 Tax=Tribonema... [more]
A0A836CB13_9STRA6.450e-3846.62HotDog domain-containing protein (Fragment) n=1 Ta... [more]
A0A5B8MHE1_9CHLO7.980e-1733.544HBT domain-containing protein n=1 Tax=Chloropicon... [more]
A0A7S3C7J7_9CHLO2.310e-1533.33Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A7D9LEU6_PARCT1.210e-1341.584HBT domain-containing protein n=1 Tax=Paramuricea... [more]
A0A6J0TZL6_9SAUR2.270e-1333.75acyl-coenzyme A thioesterase THEM4-like n=1 Tax=Po... [more]
A0A4P9ZPT6_9FUNG1.450e-1239.18HotDog domain-containing protein (Fragment) n=1 Ta... [more]
UPI00101A156E4.980e-1230.95acyl-coenzyme A thioesterase THEM4 n=1 Tax=Eptesic... [more]
A0A7J7TWT4_PIPKU5.630e-1235.59Thioesterase superfamily member 4 n=2 Tax=Pipistre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig164contigL-elsbetiae_contig164:36100..41478 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score318.9
Seed ortholog evalue2.7e-84
Seed eggNOG ortholog2880.D7FR34
Preferred nameTHEM4
KEGG koko:K16339
KEGG Pathwayko04151,map04151
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006637,GO:0006644,GO:0006650,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006839,GO:0006915,GO:0006996,GO:0007005,GO:0007006,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009117,GO:0009150,GO:0009259,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0012501,GO:0016020,GO:0016043,GO:0016289,GO:0016290,GO:0016787,GO:0016788,GO:0016790,GO:0019637,GO:0019693,GO:0019752,GO:0023051,GO:0023052,GO:0023057,GO:0031974,GO:0032048,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035336,GO:0035337,GO:0035383,GO:0035556,GO:0035965,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043491,GO:0043603,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046471,GO:0046483,GO:0046486,GO:0046902,GO:0047617,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051234,GO:0051716,GO:0051896,GO:0051898,GO:0055086,GO:0061024,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0090559,GO:1901135,GO:1901360,GO:1901564,GO:1901568,GO:1902108,GO:1902531,GO:1902532
EggNOG free text desc.thioesterase
EggNOG OGsKOG4781@1,KOG4781@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Ec32 ortholog descriptionThioesterase superfamily
Ec32 orthologEc-09_003660.1
Exons6
Model size2085
Cds size966
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig164.4346.1prot_L-elsbetiae_contig164.4346.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig164 36205..40464 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815677.643387-UTR-L-elsbetiae_contig164:36099..362041622815677.643387-UTR-L-elsbetiae_contig164:36099..36204Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig164 36100..36204 +
1691683032.0808654-UTR-L-elsbetiae_contig164:36099..362041691683032.0808654-UTR-L-elsbetiae_contig164:36099..36204Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig164 36100..36204 +
1622815677.7433448-UTR-L-elsbetiae_contig164:40464..414781622815677.7433448-UTR-L-elsbetiae_contig164:40464..41478Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig164 40465..41478 +
1691683032.1524584-UTR-L-elsbetiae_contig164:40464..414781691683032.1524584-UTR-L-elsbetiae_contig164:40464..41478Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig164 40465..41478 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815677.6615536-CDS-L-elsbetiae_contig164:36204..363851622815677.6615536-CDS-L-elsbetiae_contig164:36204..36385Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 36205..36385 +
1691683032.0967627-CDS-L-elsbetiae_contig164:36204..363851691683032.0967627-CDS-L-elsbetiae_contig164:36204..36385Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 36205..36385 +
1622815677.6780958-CDS-L-elsbetiae_contig164:37144..372311622815677.6780958-CDS-L-elsbetiae_contig164:37144..37231Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 37145..37231 +
1691683032.1053717-CDS-L-elsbetiae_contig164:37144..372311691683032.1053717-CDS-L-elsbetiae_contig164:37144..37231Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 37145..37231 +
1622815677.696352-CDS-L-elsbetiae_contig164:37779..380401622815677.696352-CDS-L-elsbetiae_contig164:37779..38040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 37780..38040 +
1691683032.1158772-CDS-L-elsbetiae_contig164:37779..380401691683032.1158772-CDS-L-elsbetiae_contig164:37779..38040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 37780..38040 +
1622815677.710334-CDS-L-elsbetiae_contig164:38612..387191622815677.710334-CDS-L-elsbetiae_contig164:38612..38719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 38613..38719 +
1691683032.1274736-CDS-L-elsbetiae_contig164:38612..387191691683032.1274736-CDS-L-elsbetiae_contig164:38612..38719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 38613..38719 +
1622815677.7213755-CDS-L-elsbetiae_contig164:39660..397591622815677.7213755-CDS-L-elsbetiae_contig164:39660..39759Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 39661..39759 +
1691683032.136024-CDS-L-elsbetiae_contig164:39660..397591691683032.136024-CDS-L-elsbetiae_contig164:39660..39759Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 39661..39759 +
1622815677.73305-CDS-L-elsbetiae_contig164:40233..404641622815677.73305-CDS-L-elsbetiae_contig164:40233..40464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 40234..40464 +
1691683032.1440418-CDS-L-elsbetiae_contig164:40233..404641691683032.1440418-CDS-L-elsbetiae_contig164:40233..40464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig164 40234..40464 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig164.4346.1

>prot_L-elsbetiae_contig164.4346.1 ID=prot_L-elsbetiae_contig164.4346.1|Name=mRNA_L-elsbetiae_contig164.4346.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=322bp
MFRWVPRLISSPPLRQRHTNRRGDNRLPGAAATVISGGLLAMVVGWERDT
GEVRCESAAKGKPMATPISSERRELRRVALAHLVKSTAVNARGQDALGRE
RSSSSSGGGGGGGDVGSTAAIALLRLGEGAGEGGGDAMEGRDGETQLLPP
NVYDVDRILAKTPLLKNDNAFHDTLNNDDAISCPYVLTRQGGEGEGIEAV
VRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQGTGAVVTAYIKVDYKA
PLPCLTTAIVDITVDRKEGRKLFVTGRLKSLDGAVTYSSAEALFIKPREA
AAGAPGGAGAGSSGLLQGVVV*
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mRNA from alignment at L-elsbetiae_contig164:36100..41478+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig164.4346.1 ID=mRNA_L-elsbetiae_contig164.4346.1|Name=mRNA_L-elsbetiae_contig164.4346.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5379bp|location=Sequence derived from alignment at L-elsbetiae_contig164:36100..41478+ (Laminarionema elsbetiae ELsaHSoW15)
GCGTCACTATATTATAGCTCCATTGTGTTAGTTTTCCCCGCCGTCCGCCC
GTTTCCGCTGCTCTTTCCCCCGCTGCCTATAGTTTTGCCGTTCCCGCCGG
TCGTCATGTTTCGCTGGGTACCCCGCCTAATTTCTTCACCGCCGCTCCGG
CAAAGGCATACGAACAGACGGGGTGACAATAGGCTTCCCGGTGCTGCTGC
CACTGTGATCTCGGGAGGGCTACTAGCGATGGTTGTGGGCTGGGAAAGGG
ACACGGGCGAGGTTCGGTGTGAGTCGGCAGCAAAAGGTATATAGATACAT
AGACTATGTATGTAGTCTAGATAATGATACGTAAACTGGAACTTTTCCAA
ACTTTTCAGGTGCCAGCTGTGTGTGTGTAGACGTGATGAATCTACTGTTG
TAGAACTACACTCCGTACATTATAGCTAGGTAGATAGGGCGGACAAGGCG
ATTGTGCTACAAGACGGCTTGGTTTCATTGTTCGTGTTGCCGCGAGCATT
GAGATATCTACAAGATAGTCTATAGGTCTAGATCGACACCGCCGGTCGAA
ACATTAACTAATCTGCCTCACGTTTCACAGCCTCTTCTTGCCCGAATATA
TGTACGTTTGGGGAACTCTCCGCGCTCGGCCTGGAGATCCAGATCCGCAA
TGCCCATTCGAAAACGATGTCCATCGTTGCCCCCTACATACATGCGTAGA
GATACATACCTACATACAAACATACACACGTTGGGCGGATTTAATGGAGA
ACTTGGGCATCAAATTTGTGCAGCGGGGGGGGAGTGGTATACGACGTCAC
GTGAGACATTTAGTCGTCAAGGTCGAGCACTCTGGGATAAATGTGAAGAA
CAAACAACAACAAAGGTGACATGGGTTTCCGAGTATGCCTTCCTCCACCT
CCAAACACGTCCTTGTCGGTCCAAGTTTCCCGCATCCATCGTTAGCGACA
CCCCCGAAACCAGGCAAGCCGCATGCCCCGAACAAGTCAATGATATGTAT
GCATGCGTTGAGTAAACTAAAGCCCCTGCTGTCTCTCGTCTTCAGGAAAG
CCGATGGCGACACCGATATCCTCGGAGCGGAGAGAGCTTAGGCGCGTGGC
GCTCGCGCACCTGGTCAAGTCTACTGCCGTGAGTAGTCTATGTGTTGTTC
GGCTGACGTCGTGTATTGTAGCAGGGTCTTTCCACGTGTGTTTTGTTGTG
CAAGGAAAGACATGTAGCAACATGTTTGGCCACTTTTTGTCATATATTTA
GCTGGCAAAACGCACGGCCACTCACACACACACACACACACACACACACA
CACACACACACACCATCTTGCAAGCTAAATACGCGGCAGTAGTGTGGAGT
TCGCATGGATTTGTAAGGAAAATGTGCGCTCGTTATCCGGGGCGCAGATA
TTTCTTTTCGGAAATACTTAATTTACCGGTGTTTTTTACACACAAAGACA
GCAGTAGTATCGATGTTGGTCCGAGGTAGTCCATGTTGCCTCGCGATGCT
GCTGCTGTTCTAAAAGGCACGAGTAAATATAAGTATATGCTTCGGTACAT
AAATATCCCAACAAAAAATAAAATAAAATAAGAAGCACGAAAAAATCGAA
TTACATTGTCTCGTCCCCTTGGTGCCACCTCGTTTGTGTAAATAAATAGG
ACCGAGCTAGACACGCTCCCGGCAACGGAGACGCACGCGGCCAAGATGCG
CTCGGGAGGGAGAGAAGCAGCAGCAGCAGCGGCGGCGGCGGCGGCGGCGG
CGATGTTGGCAGCACCGCCGCAATTGCGCTGCTGCGGCTAGGCGAGGGGG
CGGGGGAGGGCGGGGGCGACGCGATGGAAGGGCGTGACGGCGAGACGCAG
CTGCTTCCGCCGAACGTTTACGACGTGGACAGAATTCTTGCGAAGACACC
TTTGCTCAAGAACGACAACGCCTTCCACGATACCCTGAACAGTGAGTCTA
GGTGGCGGTCGCCTTAAGAGTTCCCGTACGCTGGCAGGCACGGCTTAGTT
TGAGCAATGCGCCGCCGCGGTTGCAGCCGAGCGCACTGCATGTGCTGGTG
GAAACGCGCGCGCTCTCGGGTCAATGACGTGCAAAAGGCCATGTCTGCTG
CGCTGCATACGGCCACCACAGCCTTGAAAAAGGGAGCGCGCTCTGTAGGG
AGACACGGCATTTCAACGGCTTTGTTTTTATTTCCAGGTAGGTATGCGCT
GCGTGCCGTGGTCGCAGTAGTCACTCCTACTCACGCCCCCCCCCCTTTAC
GCAATTTTTTTTTCACGTTCGCTGCGTGCACAGCTCGTTGCGGGATTTTT
CGTGCAGAGGGGTGGTTACTATGCGACCCACCCGTGTGTATCGAGGTGGC
TTTTTTTGGTGTCGGGCTGGAACCATGGCCTTGATGAATGCCAGAATGGG
AGAGCTCCACGACACGGATTTCGATATCCGTTGACCTCCCGGACCCCCCC
CCCCCCCTATCTCCTTGATACCCCGGCCTGCATTCGGTAAACACGTTTGT
TGTATACTCGTAGACGACGACGCCATAAGCTGTCCGTACGTCCTCACCAG
ACAAGGTGGCGAGGGCGAGGGGATCGAAGCCGTGGTGCGCTTCGGCAAGT
CTATCGCGGGGCACCCTAAGGTGGGCGGGGTGGGTGCGTCTTGAGCCCGC
GGAGTGCCCGCCCCCTTAGACTTGTGTAGGCCAGGTGTTCATCGGTTCGG
TAGTATCTGATTTGGAGCGCCTGTGGGGGTAGAGACGCCGGTCGGTTCCT
GCTGCTGTTTCGTATTGTGCTTATTATGGTATGAAAGTGCCACCATACCC
CCGTGCAGGATGTGGCGTTGGCAGGGTCTACCAACTGTGCCTGGACCCAA
AATTTCTGTGTTGTAAATAAGCCAGCCAGCCAGCACGGGGGGACATATTA
TGAGGCAACATGGAAAATATGGGTCTTACCGGAAACTGCGTTTCGATGGC
CGTGCTTGCGTGCAGAGAAAACCAACCCATTCGTGGCATTTCTTTTTTCA
GCTCTTCCTGTTGGGTACACTCTCCTCCGCCCTCTTTTTTGTTTCTTCCT
TTCTACGGTTGGCCCCAAGCGATACAATAGGTACGTAGTTTGCGACCTCG
CTGCCTGGCAAATATCAAGGCGAATCCCTAAAGATGAGCCACGCCCCACC
CCGGTGATACCCCTGCCCCGTCCTTGGAGATGTGCGAGGCTCCTGGTCTC
AAGACCTCCACGCTCGTGCACAGTTCTCGGAACCGCAGAATGTTGACCTC
TTGCATGCCTCCCAGTTTCTCGCGAGTAGGTACCCCAGGGCAAAGCCACA
AGATATTTTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCTCCTCC
CGCAACCCACCCCCCCCCTCGCTCTCGTCTTTTTTTTTTTTTGTTNNNNN
NNNNNGAGCCCTCCCGCCGCCCCCCCGTTCGCGCCGCGAAGGGCCCCCCC
GGGCAAAACCCCAAATTCTTTTCCCCCCCCCCCCCCCCCCCTTCCGACCG
TATTGATTGCCAAGTGCCCCTTGTCCGCTTTGTCGTTGCTTTTCGTTCTG
TCTTGGGGCAGATCGTTCACGGAGGAGTAACGGCGTTGACGTTCGACAAC
TTGTTCGGCATGGCCTTGTTCTTGCAGGGCACGGGAGCAGTTGTCACCGC
CTATATCAAGGTGGGAGAAATTGGAAAGACTCTCGTCCGAGCGCTGGTAA
ATGTGTGGGTATCCATAAGAAAAAATTAAAAGAGGCGTGCACGGAGAGCC
GCAGCCGCGTTTACGGGCGGGGGGCGGCTTGTTGTTTGTTGTTCTCAAGT
ATCGCCGCGGTTTTCGGTTTCGTCGCCTGTTTAGTTTTGTCACGGTTCAT
GGCAGCTTCATCGGAATGAAAAAGGGTGTTTTTTTCACGAATGGTCGGTT
CGGTTGCCGTGTCGGGATGTGCCATGTATTCATGTGCAGTGGGTGTTGTC
TCTCTTCTCTCTTTTATCTTTAAAATAAAACAAAGAATCAAAGATGGAAC
CTAACCCATACTAGAGCAAAGACTCGATATGGGGTTCAAACGGTATTCCA
TACAGAGACGTAATATTTGGCTCTCTCGTTCCTCTTGTCCCCCCGTGTCT
TTCTTATTCGTGTGCGTGAAATCCACCCATGTAGGTGGATTACAAGGCGC
CTCTTCCGTGCCTCACCACGGCAATCGTGGACATCACCGTCGACCGCAAG
GAGGGCCGCAAGCTCTTCGTCACCGGCAGACTCAAGAGCCTCGACGGGGC
CGTAACCTACTCGTCCGCCGAGGCCCTCTTCATCAAGCCGCGGGAGGCAG
CCGCGGGGGCGCCTGGCGGGGCTGGGGCTGGGAGCAGCGGGTTGCTCCAA
GGCGTGGTGGTGTAGGTAGACGAGGCGCGTGGCGCTATAGAGGAGCGGCG
AGGGTTTTTCCAGCAGAGCGGATTGATGCCACTGCTGTCTGTCGCCGAAA
GCCTAAGCTGCCAGCAGTAGCGAGTGCTAACTGGTGCAGAACCCGTCGCA
TTTCTGCCCGCGCGCGTGCGCGCGCGTCAATACCGATACCCTCCTCACCG
CCACCATCGCTCGTTGTGGGTTTTGGGGAGATTCGCGGTTGGTTCAGGTG
GCGCGGGGTTCAAAGAATTTTCCAGGATAGTTATAATAGTGTCGAGGAAG
ACAACTCTGCTCCGCCGTCGAGCAGAAAGGAGAAGGGGGGGAGGGGGTGG
CTGGGACCACTGCTGTTGCTGTCGTTTCTGTAAAAGTACGATTACGACGT
GTTTTGTTGTGCGGGAAGGCACTCTTCAATATATGTCGTGTGCGTTCCGC
GTGAGTGCCGGGTTTTTGTTAGGCGTCGGTGGTTCCTCTGTCCGAGGATA
TGCTGTTCGCGAGGTGTCTGTTTTGGGAAGCGCGCTCGCGCGTTTTGTGT
TTTTTGTCGAGAAGTGGTGCGTATCTCGATCTTGTTTTCAGGAGTTTTCG
GGACATACGGTTTTTAAGCTGCATCTTTCTCTGCATGCTGTACACATACC
CTTTCGCGCCAAGAGGGATGAATAGGAAAGATCTGTCCGCATTTTGTTTG
CTGCGACAACATTCGTTTTCTTGTGGCTTGCACGGGGCGACGGTTAGAGA
ATGATGCAGTACTGGTTGTTCTGATTGTGGGGGTTGTCTTTGTCTGCGCG
CTTGAGCGTGAGGTTTTTGGTTGAGGCGACGAGGGCATCCAAAGCCTGTT
GAGATCACAATGTCTCGTCAGGCTCGGTCCCTTGCCATTGCATCATTTGG
CCATTGCGTCGCGATTTTGAAAGCGATTTCACCGCGTTGGTGTCTCCATG
GACGTCTTTCCCCCAAGCAAGTTATGAGATGACACGAAAGCAAGTTAAAC
TGCTCGCTAATTTTGAGTCACATCGGAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig164:36100..41478+

>mRNA_L-elsbetiae_contig164.4346.1 ID=mRNA_L-elsbetiae_contig164.4346.1|Name=mRNA_L-elsbetiae_contig164.4346.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1932bp|location=Sequence derived from alignment at L-elsbetiae_contig164:36100..41478+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTTCGCTGGGTACCCCGCCTAATTTCTTCACCGCCGCTCCGGCAAAG
GCATACGAACAGACGGGGTGACAATAGGCTTCCCGGTGCTGCTGCCACTG
TGATCTCGGGAGGGCTACTAGCGATGGTTGTGGGCTGGGAAAGGGACACG
GGCGAGGTTCGGTGTGAGTCGGCAGCAAAAGATGTTTCGCTGGGTACCCC
GCCTAATTTCTTCACCGCCGCTCCGGCAAAGGCATACGAACAGACGGGGT
GACAATAGGCTTCCCGGTGCTGCTGCCACTGTGATCTCGGGAGGGCTACT
AGCGATGGTTGTGGGCTGGGAAAGGGACACGGGCGAGGTTCGGTGTGAGT
CGGCAGCAAAAGGAAAGCCGATGGCGACACCGATATCCTCGGAGCGGAGA
GAGCTTAGGCGCGTGGCGCTCGCGCACCTGGTCAAGTCTACTGCCGTGAG
AAAGCCGATGGCGACACCGATATCCTCGGAGCGGAGAGAGCTTAGGCGCG
TGGCGCTCGCGCACCTGGTCAAGTCTACTGCCGTGAACGCACGCGGCCAA
GATGCGCTCGGGAGGGAGAGAAGCAGCAGCAGCAGCGGCGGCGGCGGCGG
CGGCGGCGATGTTGGCAGCACCGCCGCAATTGCGCTGCTGCGGCTAGGCG
AGGGGGCGGGGGAGGGCGGGGGCGACGCGATGGAAGGGCGTGACGGCGAG
ACGCAGCTGCTTCCGCCGAACGTTTACGACGTGGACAGAATTCTTGCGAA
GACACCTTTGCTCAAGAACGACAACGCCTTCCACGATACCCTGAACAACG
CACGCGGCCAAGATGCGCTCGGGAGGGAGAGAAGCAGCAGCAGCAGCGGC
GGCGGCGGCGGCGGCGGCGATGTTGGCAGCACCGCCGCAATTGCGCTGCT
GCGGCTAGGCGAGGGGGCGGGGGAGGGCGGGGGCGACGCGATGGAAGGGC
GTGACGGCGAGACGCAGCTGCTTCCGCCGAACGTTTACGACGTGGACAGA
ATTCTTGCGAAGACACCTTTGCTCAAGAACGACAACGCCTTCCACGATAC
CCTGAACAACGACGACGCCATAAGCTGTCCGTACGTCCTCACCAGACAAG
GTGGCGAGGGCGAGGGGATCGAAGCCGTGGTGCGCTTCGGCAAGTCTATC
GCGGGGCACCCTAAGACGACGACGCCATAAGCTGTCCGTACGTCCTCACC
AGACAAGGTGGCGAGGGCGAGGGGATCGAAGCCGTGGTGCGCTTCGGCAA
GTCTATCGCGGGGCACCCTAAGATCGTTCACGGAGGAGTAACGGCGTTGA
CGTTCGACAACTTGTTCGGCATGGCCTTGTTCTTGCAGGGCACGGGAGCA
GTTGTCACCGCCTATATCAAGATCGTTCACGGAGGAGTAACGGCGTTGAC
GTTCGACAACTTGTTCGGCATGGCCTTGTTCTTGCAGGGCACGGGAGCAG
TTGTCACCGCCTATATCAAGGTGGATTACAAGGCGCCTCTTCCGTGCCTC
ACCACGGCAATCGTGGACATCACCGTCGACCGCAAGGAGGGCCGCAAGCT
CTTCGTCACCGGCAGACTCAAGAGCCTCGACGGGGCCGTAACCTACTCGT
CCGCCGAGGCCCTCTTCATCAAGCCGCGGGAGGCAGCCGCGGGGGCGCCT
GGCGGGGCTGGGGCTGGGAGCAGCGGGTTGCTCCAAGGCGTGGTGGTGTA
GGTGGATTACAAGGCGCCTCTTCCGTGCCTCACCACGGCAATCGTGGACA
TCACCGTCGACCGCAAGGAGGGCCGCAAGCTCTTCGTCACCGGCAGACTC
AAGAGCCTCGACGGGGCCGTAACCTACTCGTCCGCCGAGGCCCTCTTCAT
CAAGCCGCGGGAGGCAGCCGCGGGGGCGCCTGGCGGGGCTGGGGCTGGGA
GCAGCGGGTTGCTCCAAGGCGTGGTGGTGTAG
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