mRNA_L-elsbetiae_contig164.4344.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig164.4344.1 vs. uniprot
Match: D7FR35_ECTSI (Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR35_ECTSI) HSP 1 Score: 833 bits (2151), Expect = 6.250e-272 Identity = 428/498 (85.94%), Postives = 457/498 (91.77%), Query Frame = 1 Query: 808 QDQEWLWAADFLPFLEFSDPMFSPAMVGRWIGWIGMAHLHLGRLLPAHNHMQEALVYLGFPAVPNQVLPFDRAVCLAKEACLARGPGRDSDDTLFAASLYGAIADISIKAGMGGNLVFINRLVRVTTRSIEFMDYTHEGVRLVVNLAHEELAKGHQDKVEMLLDRALALSTDIGDPITRGIALIASGRYNAGEGLVAEAEEDFAEAFEMFAPAGDYSRCGEVVVESAYVKLCSGATQEALSMFNEVRDTAIVHKNDFLSQQASLHGAALVHAITLSTAEASACLAQMRTIVEEDWARRRGRRGRTAAATEGTSHASLVVMETLDAYLAASRGDGKAALKGVHRASLRLSQPGALRFSSGLFLHLATDACFTILEQQDMLPPGPDAHRKILAAARLLIRTLGKFAQAFDLMSPLHQLGRARWSLLHGMDKVAEKALELGLVISEEDVHFPFAEGLLLLHSTRIESLPMEERRARARRGRRTLHRIGACLIPPADRHRNQ 2301 +DQEWLWAADFLP+LEFSDP+FSP +V RWIG IGMAHLHLGRLLPAHNHMQEALVYLGFPAVP+Q LPFDRA CLAKE L +GP RDSDDTLFAA LYGAIADISIK GMGGNL FINRLV+V+TR ++F+D T EG+RL++NLAHEELAKGH DK E LLDRALALS DIGDPITRGIALIASG YNAGEGLV EAEE FAEAFEMFAPAGDYSRCGEVVV SAY KLCSG T EALSMFNEVRDTAI H +D+LSQ ASLHGAALVHAIT + AEASA LA+MR+IVEEDWARRRGRRGRTAAATEGTSHASLVVMETL AYLAASRGDGKAALKGV RASLRLS+ GALRFSSGLFLHLATDACFTILEQ DMLPPGPD++R+++AAARLLIRTLG+FAQ FDLMSPLHQLGRARWS+LHGMDKVAEKAL LGL ISEEDVHFPFAEGLLLLHSTRIESLPM+ERRARARRGRRTLHRIGACLIPPADR R + Sbjct: 1779 KDQEWLWAADFLPWLEFSDPLFSPTLVARWIGAIGMAHLHLGRLLPAHNHMQEALVYLGFPAVPSQALPFDRAACLAKEFFLMQGPARDSDDTLFAAKLYGAIADISIKTGMGGNLSFINRLVKVSTRKVDFVDKTQEGIRLLLNLAHEELAKGHHDKTESLLDRALALSIDIGDPITRGIALIASGTYNAGEGLVTEAEEHFAEAFEMFAPAGDYSRCGEVVVGSAYAKLCSGDTPEALSMFNEVRDTAISHNDDYLSQ-ASLHGAALVHAITGNMAEASAGLAKMRSIVEEDWARRRGRRGRTAAATEGTSHASLVVMETLGAYLAASRGDGKAALKGVCRASLRLSRAGALRFSSGLFLHLATDACFTILEQ-DMLPPGPDSYRRVIAAARLLIRTLGRFAQMFDLMSPLHQLGRARWSMLHGMDKVAEKALVLGLEISEEDVHFPFAEGLLLLHSTRIESLPMDERRARARRGRRTLHRIGACLIPPADRTRKK 2274 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig164.4344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig164.4344.1 >prot_L-elsbetiae_contig164.4344.1 ID=prot_L-elsbetiae_contig164.4344.1|Name=mRNA_L-elsbetiae_contig164.4344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=499bp MFSPAMVGRWIGWIGMAHLHLGRLLPAHNHMQEALVYLGFPAVPNQVLPFback to top mRNA from alignment at L-elsbetiae_contig164:1752..11185- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig164.4344.1 ID=mRNA_L-elsbetiae_contig164.4344.1|Name=mRNA_L-elsbetiae_contig164.4344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9434bp|location=Sequence derived from alignment at L-elsbetiae_contig164:1752..11185- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig164:1752..11185- >mRNA_L-elsbetiae_contig164.4344.1 ID=mRNA_L-elsbetiae_contig164.4344.1|Name=mRNA_L-elsbetiae_contig164.4344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2994bp|location=Sequence derived from alignment at L-elsbetiae_contig164:1752..11185- (Laminarionema elsbetiae ELsaHSoW15)back to top |