mRNA_L-elsbetiae_contig1637.4332.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1637.4332.1
Unique NamemRNA_L-elsbetiae_contig1637.4332.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Match: D8LRA1_ECTSI (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA1_ECTSI)

HSP 1 Score: 783 bits (2022), Expect = 7.220e-283
Identity = 394/469 (84.01%), Postives = 410/469 (87.42%), Query Frame = 2
Query:    5 MALCLALVHLKPRYGFEVVGIHIDYGNRHESGREADFVEGWCARHGVVFFKRAIAEVRRGVTGREEYEKVAREIRFDAYKAALRGRG-------------GGAAEAVGEGGGQGASCPAVMFGHHEGDVEENVVTNLIKGCSILELAGMLPENTVNGVRVWRPMLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGVLGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLLFWKEVLRRLVHSMGMPMVRDKTLGMFVRDTLQRDMGVPLKDKWVELRKEYVGFLKEGRLYVFRTGVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITTVEGEAKQPQDLQGMERGRPPAANTPPFRTMEELMDGELSYVVAVPDTREAGLTVQPGARARAPAWRDVDARIRRGIPLVAPPLCRDPVPLAVSGARMVTVTLKYTGA 1372
            MALC ALVHL+P YGFEVVGIHIDYGNRHESGREADFV+GWCARHGVVF+KRAI EVRRGVT R+EYEKVAREIRFDAYKAAL GR              GG  E  GEGGG     PAVMFGHHEGDVEENV+TNLIKGCSILELAGM PENTVNGVRVWRPMLPFGK VVYDFAH+FGVPYFKDTTPSWSTRGKLRRQLIP+MEDVFGSGVLGHLSAVARESDDLR LVHRELFQPVWDKAV QPLG+ LDVE+YR HGLLFWKEVLR+LVH MGMPMVRDKTLGMFVRDTLQRD  VPLKDKWVELRKEYVGFL  G LY+FR GVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITT E E K PQ+LQG ERGRPPAAN  PF +MEELMDGELSYVVAVPDT EA LTVQPG RA+APAWRDVD RIRRG+PL+APP  RDP  L  SGARMVTVTLKYTGA
Sbjct:    1 MALCRALVHLRPVYGFEVVGIHIDYGNRHESGREADFVQGWCARHGVVFYKRAIGEVRRGVTARDEYEKVAREIRFDAYKAALGGRSKDGNSXXXXXXXXGGGKEEKGEGGG---GRPAVMFGHHEGDVEENVLTNLIKGCSILELAGMSPENTVNGVRVWRPMLPFGKDVVYDFAHKFGVPYFKDTTPSWSTRGKLRRQLIPMMEDVFGSGVLGHLSAVARESDDLRDLVHRELFQPVWDKAVTQPLGLRLDVESYRSHGLLFWKEVLRQLVHKMGMPMVRDKTLGMFVRDTLQRDTHVPLKDKWVELRKEYVGFLCGGSLYIFRMGVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITTAETETKLPQELQGFERGRPPAANALPFASMEELMDGELSYVVAVPDTPEAALTVQPGLRAKAPAWRDVDPRIRRGMPLLAPPPSRDPPLLKESGARMVTVTLKYTGA 466          
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Match: A0A6H5L0I6_9PHAE (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I6_9PHAE)

HSP 1 Score: 781 bits (2016), Expect = 8.570e-280
Identity = 393/466 (84.33%), Postives = 409/466 (87.77%), Query Frame = 2
Query:    2 SMALCLALVHLKPRYGFEVVGIHIDYGNRHESGREADFVEGWCARHGVVFFKRAIAEVRRGVTGREEYEKVAREIRFDAYKAALRGRG---------GGAAEAVGEGGGQGASCPAVMFGHHEGDVEENVVTNLIKGCSILELAGMLPENTVNGVRVWRPMLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGVLGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLLFWKEVLRRLVHSMGMPMVRDKTLGMFVRDTLQRDMGVPLKDKWVELRKEYVGFLKEGRLYVFRTGVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITTVEGEAKQPQDLQGMERGRPPAANTPPFRTMEELMDGELSYVVAVPDTREAGLTVQPGARARAPAWRDVDARIRRGIPLVAPPLCRDPVPLAVSGARMVTVTLKYTGA 1372
            SMALC ALVHL+P YGFEV+GIHIDYGNRHESGREADFVEGWC RHGVVF+KRAI EVRRGVT R+EYEKVAREIRFDAYKAAL GR          GG  E  GEGGG     PAVMFGHHEGDVEENV+TNLIKGCSILELAGM PENTVNGVRVWRPMLPFGK VVYDFAH+FGVPYFKDTTPSWSTRGKLRRQLIP+MEDVFGSGVLGHLSAVARESDDLR LVHRELFQPVWDKAV QPLG+ LDVE+YR HGLLFWKEVLR+LVH MGMPMVRDKTLGMFVRDTLQRD  VPLKDKWVELRKEYVGFL  G LY+FR GVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITT E E K PQ+LQ  ERGRPPAAN  PF +M+ELMDGELSYVVAVPDT EA LTVQPG RA+APAWRDVD RIRRG+PLVAPP  RDP  L  SGARMVTVTLKYTGA
Sbjct:  139 SMALCRALVHLQPVYGFEVMGIHIDYGNRHESGREADFVEGWCERHGVVFYKRAIGEVRRGVTARDEYEKVAREIRFDAYKAALGGRSNDGNGDDNEGGXKEEKGEGGGV---RPAVMFGHHEGDVEENVLTNLIKGCSILELAGMSPENTVNGVRVWRPMLPFGKDVVYDFAHKFGVPYFKDTTPSWSTRGKLRRQLIPMMEDVFGSGVLGHLSAVARESDDLRDLVHRELFQPVWDKAVTQPLGLRLDVESYRSHGLLFWKEVLRQLVHKMGMPMVRDKTLGMFVRDTLQRDTHVPLKDKWVELRKEYVGFLCGGSLYIFRMGVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITTAETETKPPQELQDFERGRPPAANALPFASMDELMDGELSYVVAVPDTPEAALTVQPGLRAKAPAWRDVDPRIRRGMPLVAPPPSRDPPLLKESGARMVTVTLKYTGA 601          
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Match: A0A835YLZ2_9STRA (tRNA(Ile)-lysidine synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLZ2_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.010e-86
Identity = 203/546 (37.18%), Postives = 267/546 (48.90%), Query Frame = 2
Query:    2 SMALCLALVHLKPRYGFEVVGIHIDYGNRHESGREADFVEGW-----------------CARHGVVFFKRAIAEVRRGVTGREEYEKVAREI----------------RFDAYKAALRGRGGGAAEAVGEGGGQGASCPAVMFGHHEGDVEENVVTNLIKGCSILELAGMLPENTVNGVRVWRPMLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGVLGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLLFWKEVLRRLVHSMGMPM--------------------------VRDKTLGMFVRDTLQRDMGVPLKDKWVELRKEYVGFLKEGR----LYVFRTGVFLPPNTSYGEKAEGTPVPL-DGGLVQVGPWRITTVEGEAKQPQDLQGMERGRPPAANTPPFRTMEELMDGELSYVVAVPDTREAGLTVQPGA----------------RARAPA---WRDVDARIRRGIPLVAPPLCRDPVPL------AVSGARMVTVTLKYTGA 1372
            SM L   L HL+P YG+ +V +HIDY NR ESG+EADFVE                   C    + F KR ++EV RGVT R EYE V+RE                 R+ AY   LR               + A CPA++FGHH GDV+ENVV+N+++GCS+L++AGM  E+  +GV+VWRP+L F K  ++DFAHR+ VPYFKDTTP WSTRGKLR  L+PL++D++G GVLGHLSA+A  SD+L   + RELFQP WD     P+G  +D+  YRG GL FW+E L  L+HS+G+PM                          V D+ L   +R  L      P    W  LR+EY  +  E R    LY+ +     PP   Y   AEGT V + + G V          +G             G  P    PPF  +   M G  S+ + +P +    L V P                  RA AP    +R +D  +R   PLV+    R    L      A  G R+V VT +Y G+
Sbjct: 1111 SMVLAKILHHLQPAYGWRLVAVHIDYANRAESGKEADFVEQCVXXXXXXXXXXXTEPTSCHSLSITFRKRVVSEVTRGVTDRAEYEAVSREAANASRMAVTDEDRRDARYAAYAEVLR---------------EFAPCPAILFGHHRGDVQENVVSNVMRGCSLLKVAGMGEESINSGVKVWRPLLAFDKDAIFDFAHRYSVPYFKDTTPLWSTRGKLRNGLVPLLKDMYGDGVLGHLSALAAGSDELASELRRELFQPFWDSVERCPMGASVDLMPYRGKGLYFWREALMVLLHSLGLPMAXXXXXXXXXXXXXXXXXXXXXXXXXVSDRALITTLR-RLGEPNAPPPSAAWWPLRREYRCYCSEARIEGVLYILQPAA-APPEP-YAVAAEGTEVEVSEPGPVVAADQLAAHKKGSRSXXXXXXXXXXGWLPELLPPPFADIRGFMSGAFSHTLPIPTSPPHDLRVAPPPLLRERNAQRPDAAAQRRAEAPLPFPFRGMDPCLRACAPLVS--CARGQAALEGWGDAAGGGVRVVRVTYRYVGS 1636          
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Match: A0A1Z5K323_FISSO (tRNA(Ile)-lysidine synthetase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K323_FISSO)

HSP 1 Score: 289 bits (740), Expect = 9.980e-86
Identity = 168/434 (38.71%), Postives = 249/434 (57.37%), Query Frame = 2
Query:    2 SMALCLALVHLKPRYGFE-VVGIHIDYGNRHESGREADFVEGWCARHGVVFFKRAIAEVRRGVTGREEYEKVAREIRFDAYKAALRGRGGGAAEAVGEGGGQGASCPAVMFGHHEGDVEENVVTNLIKGCSILELAGMLPENTVNGVRVWRPMLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGVLGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLLFWKEVLRRLVHSMGMPMVRDKTLGMFVRDTLQRDMGVPLKDKWVELRKEY-VGFLKEGRLYVFRTGVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITTVEGEAKQPQDLQGMERGRPPAANTPPFRTMEELMDGELSYVVAVP---DTREAGLTVQPGARARAPAWRDVDARIRRGIPLV 1288
            SM +   L  L+ ++    +V +HIDY NR ES  EA +V+ +C + G+V+  R I EV RG+T R+EYE++AREIR+ AY+ A+        E  G G         ++ GHH+GD+ ENV++N  KGC  L+L+GM   +  +GV + RP+LP  K  ++D+AH+FGVPYFKDTTP WSTRGKLR +L+PL+E+V+G G + +LSA+A ESD+ R L H+   QP  D+  ++P+G+      ++  GL FWK VLR ++HS G+ M  DK++  F    L+R     LK+ W++ RK+Y V   K+G + VF    F  P       A G  +   G    VGPW +T        PQ+L+  E G         +R+  E+M+G + Y ++VP   D     L      R R  AW+ +D +++  +PLV
Sbjct:  321 SMVIAFVLNQLRAQFQLPPLVAVHIDYANRPESSAEAQYVQHYCDQLGIVYRCRRIDEVTRGITARDEYERIAREIRYQAYRDAIE-------EFDGIG---------ILLGHHKGDLRENVLSNAHKGCGPLDLSGMTAVSQNDGVTLLRPLLPLEKIAIFDYAHQFGVPYFKDTTPHWSTRGKLRNRLVPLLEEVYGEGSMNNLSALAVESDECRALFHQLALQPFLDQTTYKPMGLQFATAPWKEQGLFFWKFVLREVLHSAGLGMFSDKSVVSF----LERVQAKTLKEGWLQCRKDYGVHLQKDGTVSVFYPRCF--PFREADRFAVGEQLEY-GKAKTVGPWSVTA----QVLPQELEPDESGT--LVEMKAYRSFAEMMNGTIDYYISVPYINDQVHPLLFTHFTRRTRPTAWKSLDLKVQEVLPLV 725          
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Match: C1E3H1_MICCC (tRNA(Ile)-lysidine synthetase n=3 Tax=Micromonas TaxID=38832 RepID=C1E3H1_MICCC)

HSP 1 Score: 286 bits (733), Expect = 1.410e-84
Identity = 171/439 (38.95%), Postives = 240/439 (54.67%), Query Frame = 2
Query:    2 SMALCLALVHLKPRYG-FEVVGIHIDYGNRHESGREADFVEGWCARHGVVFFKRAIAEVRRGVTGREEYEKVAREIRFDAYKAALRGRGGGAAEAVGEGGGQGASCPAVMFGHHEGDVEENVVTNLIKGCSILELAGMLPENTVNGVRVWRPMLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGVLGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLLFWKEVLRRLVHSMGMPMVRDKTLGMFV-RDTLQRDMGVPLKDKWVELRKEYVGFLKEGRLYVFRTGVFLPPNTSYGEKAE-----GTPVPLDGGL-VQVGPWRITTVEGEAKQPQDLQGMERGRPPAANTPPFRTMEELMDGELSYVVAVPDTREAGLTVQPGARARAPAWRDVDARIRRGIPLVAP 1294
            SM L   L    P +G F+VV +HIDY NR ESG+EADFV GWC R G+V   R IAEV+RGVT RE+YE  +R IR+  YK   +  G                 PAV  GHHEGDV+EN++ N+ +G ++L + GM  E  V GVR+WRPMLP  K  V DFAH FGVPYF DTTP+WSTRGKLR QL+PL+ D+FG G L +LS +  +S  L  +V   +  P   +      G + D        +LFWKE L+R+ H +G  M++++++   + R TL +      KD W+ L+K    F+    L +F +  F  P+  + EK+      GT V LD     +VGPW IT        P  ++G+      A  +     +  ++  E++Y++ + ++  A        +AR P  R VDA++ R +PLV P
Sbjct:  308 SMVLATILKAAAPSFGDFDVVAMHIDYANRPESGKEADFVRGWCERKGIVCVVRRIAEVKRGVTPREQYEAESRAIRYGLYKECAKTHG----------------FPAVFVGHHEGDVQENIIANIFRGANVLGMNGMNEEGVVEGVRIWRPMLPHSKDPVLDFAHTFGVPYFLDTTPTWSTRGKLRNQLLPLLADMFGDGFLRNLSLLGEDSAQLGRMVEDSVLGPFSKRMRLSDSGAYADFSGDEDKPMLFWKEALKRMCHGLGSGMMKERSVRELIDRFTLSKRRCA--KDGWITLKKLNKTFVTGKTLGMFSSEFF--PHYPWTEKSVWSEPVGTTVGLDAAEPTRVGPWTITA----RVVPNSIEGVA-----ALESAAPLDVWAILRNEITYLLPLTESHAAPGAYYVDTKARIPPLRGVDAQVARALPLVVP 717          
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Match: A0A2D4C4Z2_PYTIN (tRNA(Ile)-lysidine synthetase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4Z2_PYTIN)

HSP 1 Score: 285 bits (730), Expect = 2.490e-83
Identity = 178/459 (38.78%), Postives = 250/459 (54.47%), Query Frame = 2
Query:    2 SMALCLALVHLKPRYG-FEVVGIHIDYGNRHESGREADFVEGWCARHGVVFFKRAIAEVRRGVTGREEYEKVAREIRFDAYKAALRGRGGGAAEAVGEGGGQGASCPAVMFGHHEGDVEENVVTNLIKGCSILELAGMLPENTVNGVRVWRPMLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGVLGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLLFWKEVLRRLVHS-MGMPMVRDKTLGMFVRDTLQRDMGVPLKDKWVELRKEYVGFLKEGR-LYVFRTGVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRI-TTVEGEAKQPQDLQGMERGRPPAANTPPFRTMEELMD-GELSYVVAVPDTREAGLTVQPGARARAPAWRDVDARIRRGIPLVAPPLCRDPVPLAVSGARMVTVTLKY 1363
            SM +   L  L+ ++  F +V +HIDYGNR ESG E D+V  WC R G++F  R + EV+R  T R++YE+++R+IR+  Y   +   G                CP + FGHH GDV+ENV++N++KG S+L L GM   + VNGVR+WRP+L F K  +++FAHR+GVPYFKDTTP WSTRGKLR  LIPL+ D++G G L +LS +  ES     LV R +  P+ D      + + LD     G     WKEVLR + H+ MG  MVR+K +   +   L R  G    D+W+ L+K    FL   + L +FR  VF P  T Y E+  GT V L G     GPW + T++E + + P+ +Q   RG           TM EL+  G++ Y  A+P + +A   +      R P  R  +  +   +PLV     R   P + S  R V VT+ Y
Sbjct:  232 SMVIAYLLHKLRSQHNNFAIVAVHIDYGNREESGAECDYVRRWCERFGIIFHARRVDEVKRATTKRDDYERISRDIRYGTYATVMAQYG----------------CPGMCFGHHRGDVQENVISNMMKGISLLNLNGMSESSVVNGVRIWRPLLAFDKDAIFEFAHRYGVPYFKDTTPRWSTRGKLRNHLIPLLRDMYGDGFLNNLSNLGAESMQCSELVDRTVLSPILDTVGSSEVAVWLDCTRLIGQPFFVWKEVLREVCHARMGNSMVREKPIRELMMK-LARHRGHETGDQWITLKKGNRSFLTADKVLIIFRDRVF-PLKTKYVER--GTAVTL-GASHTFGPWTVETSIETDTEHPRVVQ-WRRGE--------VLTMSELVTTGQVQY--ALPCSADAAPELVVDWEDRLPTLRMKEKVMTDFMPLVT---LRKAAPSS-SSERFVLVTIAY 654          
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Match: A0A448ZEJ9_9STRA (tRNA(Ile)-lysidine synthetase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEJ9_9STRA)

HSP 1 Score: 282 bits (722), Expect = 2.370e-82
Identity = 172/449 (38.31%), Postives = 257/449 (57.24%), Query Frame = 2
Query:    2 SMALCLALVHLKPRYGFE---VVGIHIDYGNRHESGREADFVEGWCARH---GVVFFKRAIAEVRRGVTGREEYEKVAREIRFDAYKAALRGRGGGAAEAVGEGGGQGASCPAVMFGHHEGDVEENVVTNLIKGCSILELAGMLPENTVNGVRVWRPMLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGVLGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLLFWKEVLRRLVHSMGMPMVRDKTLGMFVRDTLQRDMGVPLKDKWVELRKEYVGFLKE-GRLYVFRTGVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITTVEGEAKQPQDLQGMERGRPPAA--NTPPFRTMEELMDGELSYVVAVPDT----REAG------LTVQPGARARAP-AWRDVDARIRRGIPLV 1288
            SM +   L  LK   G++   +  +HIDY NR ESG EAD+V  +C  H    + F  R I EV RGVT R++YE++AREIR+D+Y+ A+      A E +G   G G     V+ GHH GD+ ENV++N  KGC  L+L+GM   +  +G+ V+RP+LP  K +V+D+AHRFGVPY+KDTTP WSTRGKLR +L+PL+E+++G G + +LS +A ESD+ R L+++ +  P  D  V +P+G+ LD   ++   L FWK VLR  +HS G+ M  DK+    V + L+R      K  W++ RK+Y  +L+E GR+YV     F P +     + +G  V   G    VG W++ +   E      ++ +   +PPAA        +M+ LMDG + Y V         +E+G      L  +  ++A  P AW+  D RI+  +P++
Sbjct:  386 SMVIASVLADLKRSRGYDHLAISAVHIDYANRPESGAEADYVRRYCEHHLGGAISFVCRRIGEVTRGVTARDDYERIAREIRYDSYREAVAR----AREGLGLLPGGGPRTVGVVLGHHRGDLRENVLSNAHKGCGPLDLSGMTAVSRNDGITVFRPLLPLEKSLVFDYAHRFGVPYYKDTTPHWSTRGKLRNKLLPLLEEIYGDGSMNNLSNLAVESDECRALMNKSMIAPFLDSIVRRPMGIVLDTSAWKDQPLFFWKVVLREALHSAGLGMFSDKS----VLEFLKRIQATKPKAAWLQCRKDYGVYLQEDGRVYVLYPSSF-PWSKKDAYRVDGQVVEF-GTDRTVGSWKVRS---EVLSDSAIESL--SQPPAALLERRAVPSMDSLMDGNIEYFVKASTRFEKDKESGRFVPRSLVFRTFSKADRPRAWKSCDLRIQSTLPVL 819          
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Match: A0A6B2KYV1_9EUKA (tRNA(Ile)-lysidine synthetase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYV1_9EUKA)

HSP 1 Score: 278 bits (712), Expect = 2.380e-82
Identity = 146/352 (41.48%), Postives = 214/352 (60.80%), Query Frame = 2
Query:    2 SMALCLALVHLKPRYGFEVVGIHIDYGNRHESGREADFVEGWCARHGVVFFKRAIAEVRRGVTGREEYEKVAREIRFDAYKAALRGRGGGAAEAVGEGGGQGASCPAVMFGHHEGDVEENVVTNLIKGC-SILELAGMLPENTVNGVRVWRPMLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGVLGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLLFWKEVLRRLVHSMGMPMVRDKTLGMFVRDTLQRDMGVPLKDKWVELRKEYVGFLKEGRLYVFRTGVFLPPNTSYGEKAEGTPV-PLDGG-LVQVGPWRIT 1048
            SM +   L+ L P++ ++V+ IHIDY NR ESG EA +VE WC +  V+F KR I+EV RG+T RE YEK +R IRF+ Y++ L                +  +   +  GHH+GD +EN++TN++KG  SIL L+GM PE+ + GV+VWRP +P  K V+YDF+H++G+PYF DTTP WS RGK+R  L PL+ D+FG G L +LSA+  +S +L  L+   +F+PVW+      +G+  +++ +R    LFWKE +R + +SMG+  VRDK++G F++   +   G   +  WV L+ E      E  L +FR+  F  P+TSY        V P D   +V  GPW +T
Sbjct:  219 SMCILKCLLLLAPKFKYKVIAIHIDYANRPESGLEATYVEEWCKKFDVIFRKRVISEVTRGITDRELYEKESRRIRFEFYRSVLN---------------EFQTDSGICLGHHKGDEQENIITNIMKGRESILNLSGMSPESIIEGVKVWRPCMPHPKSVIYDFSHKYGIPYFLDTTPVWSNRGKVRNHLQPLLGDIFGFGYLNNLSALGEDSKELSELLTATVFKPVWETIKRTEVGVWFNIKDHRTKPKLFWKETMRYIFYSMGVSTVRDKSMGHFMK---RMGEGFAKEGVWVSLKLENPALFFEDSLIIFRSSFF--PSTSYFTNKSTIEVSPTDPQTVVTFGPWTVT 550          
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Match: R1DKB5_EMIHU (tRNA(Ile)-lysidine synthetase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DKB5_EMIHU)

HSP 1 Score: 279 bits (714), Expect = 4.250e-82
Identity = 170/429 (39.63%), Postives = 230/429 (53.61%), Query Frame = 2
Query:    2 SMALCLALVHLKPRYGFEVVGIHIDYGNRHESGREADFVEGWCARHGVVFFKRAIAEVRRGVTGREEYEKVAREIRFDAYKAALRGRGGGAAEAVGEGGGQGASCPAVMFGHHEGDVEENVVTNLIKGCSILELAGMLPENTVNGVRVWRPMLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGVLGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLLFWKEVLRRLVHS-MGMPMVRDKTLGMFVRDTLQRDMGVPLKDKWVELRKEYVGFLKEGRLYVFRTGVFLPPNTSYGEKAEGTPVP------LDGGLVQVGPWRITTV---EGEAKQPQDLQGMERGRPPAANTPPFRTMEELMDGELSYVVAVPDTREAGLT---VQPGARARAPAWR 1249
            SM L   L+ L+PR+   V  +HIDY NR ESG EA F++ WCA  GV    R + EVRRG T R+EYEKV+R +RFDAY+ AL   GG                 AV+FGHH GDV ENV++N++KG S+L +AG+   + VNGV +WRPMLP  K ++YD+AHR+GVPYFKD+TP WSTRG+LR QL PL+ +V+G G   HLSA+AR+S     L+  +L+ P        PL +  D        L FW+E LR +    +G+ +V +K     V   L+R     +++ W+ LRKE    L  G L   R  VF       G    G  VP      + G  +  GPWR+      +G +  P      +  RP AA       + E++ G  +YV+ V +    G T   V P  RA   AW+
Sbjct:  311 SMVLAHVLLRLQPRHRRRVCAVHIDYTNRAESGAEAAFLQRWCAARGVPLRVRTVEEVRRGATSRDEYEKVSRAVRFDAYRQALAQFGG----------------RAVLFGHHLGDVHENVISNVMKGASLLNIAGISTASAVNGVLIWRPMLPHPKSLLYDYAHRYGVPYFKDSTPGWSTRGRLRNQLQPLLAEVYGEGYSTHLSALARDSALCSELIDSQLYAPFRSSLRRSPLAVWFDAAGRAALPLFFWREALRHVCEKELGIGLVGEKA----VLQLLERLRAPRVREGWLALRKESRVLLAAGTLAFLRPSVFPGARRGRGLIGPGEAVPAPPADAVRGPTISFGPWRVRITRCAQGSSLGP-GADTSDVARPAAA-----LGLWEVLSGRFAYVLPVHERYAIGSTDRVVVPALRALGKAWQ 713          
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Match: A4RU81_OSTLU (tRNA(Ile)-lysidine synthetase n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RU81_OSTLU)

HSP 1 Score: 274 bits (701), Expect = 1.700e-80
Identity = 154/431 (35.73%), Postives = 237/431 (54.99%), Query Frame = 2
Query:   17 LALVHLKPRYGFEVVGIHIDYGNRHESGREADFVEGWCARHGVVFFKRAIAEVRRGVTGREEYEKVAREIRFDAYKAALRGRGGGAAEAVGEGGGQGASCPAVMFGHHEGDVEENVVTNLIKGCSILELAGMLPENTVNGVRVWRPMLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGVLGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLLFWKEVLRRLVHSMGMPMVRDKTLGMFVRDTLQRDMGVPLKDKWVELRKEYVGFLKEGRLYVFRTGVFLPPNTSYGEKAEGTPVPLD--GGLVQVGPWRITTVEGEAKQPQDLQGMERGRPPAANTP---PFRTMEELMDGELSYVVAVPDTREAGLTVQPGARARAPAWRDVDARIRRGIPLVAP 1294
            + L ++    G++VV +HIDY NR ES  EADFV+ W  RHG+ F +  + ++RRGVT RE+YE  +R IR+  YK A    G                 PAV+ GHH GDV+EN++TNL++G ++L + GM  E  V GVR+WRPML   K  V  FAH +G+PYF D+TP+WSTRGKLR QL+PL+ED+FG G+L +LS +   S+ L  +V + LF+P WD      +G ++D E +    + FWK+V+R   H +G  M++D+++ + +   ++R+     KD W+ L+KE   F+  G  +   T  F+P + +      GTP+ +   G    +G W I           DL+ +          P   P  T+  +++ ++SY +   D   +   + P    R P  +++D  +R  +PLV P
Sbjct:  267 MVLAYILKHQGYDVVTLHIDYKNRPESTEEADFVDDWSLRHGMKFERCTVDQIRRGVTPREQYEIESRRIRYGFYKEAGAKHG----------------FPAVLLGHHHGDVQENIITNLMRGANLLSVNGMSDEGVVEGVRIWRPMLSHVKDDVLTFAHAYGIPYFLDSTPTWSTRGKLRNQLVPLLEDMFGIGLLRNLSVIGENSEQLSEMVDKSLFKPFWDATKSSDVGCYVDCEPFISQPIFFWKQVIRETCHGLGASMMKDRSVRLLLA-RIKRERST--KDGWLCLKKENATFM-HGNTFGMFTTEFMPRSDTI---VPGTPIVVSSSGASFDIGNWHI-----------DLEVVSNVSVDGNQCPLEGPAITVWNVLENDISYHIPYKDGTNS-YVIDP--EIRFPPTQNLDTAVRDALPLVVP 660          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1637.4332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRA1_ECTSI7.220e-28384.01tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus s... [more]
A0A6H5L0I6_9PHAE8.570e-28084.33tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus s... [more]
A0A835YLZ2_9STRA1.010e-8637.18tRNA(Ile)-lysidine synthetase n=1 Tax=Tribonema mi... [more]
A0A1Z5K323_FISSO9.980e-8638.71tRNA(Ile)-lysidine synthetase n=2 Tax=Fistulifera ... [more]
C1E3H1_MICCC1.410e-8438.95tRNA(Ile)-lysidine synthetase n=3 Tax=Micromonas T... [more]
A0A2D4C4Z2_PYTIN2.490e-8338.78tRNA(Ile)-lysidine synthetase n=1 Tax=Pythium insi... [more]
A0A448ZEJ9_9STRA2.370e-8238.31tRNA(Ile)-lysidine synthetase n=1 Tax=Pseudo-nitzs... [more]
A0A6B2KYV1_9EUKA2.380e-8241.48tRNA(Ile)-lysidine synthetase n=1 Tax=Arcella inte... [more]
R1DKB5_EMIHU4.250e-8239.63tRNA(Ile)-lysidine synthetase n=2 Tax=Emiliania hu... [more]
A4RU81_OSTLU1.700e-8035.73tRNA(Ile)-lysidine synthetase n=2 Tax=Ostreococcus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1637contigL-elsbetiae_contig1637:7467..17282 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score792.0
Seed ortholog evalue1.5e-226
Seed eggNOG ortholog2880.D8LRA1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PP-loop family
EggNOG OGs2QS82@2759,COG0037@1
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionRossmann-like alpha/beta/alpha sandwich fold
Ec32 orthologEc-06_003290.1
Exons9
Model size1527
Cds size1371
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815676.001033-UTR-L-elsbetiae_contig1637:7466..74701622815676.001033-UTR-L-elsbetiae_contig1637:7466..7470Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1637 7467..7470 +
1691683030.9819956-UTR-L-elsbetiae_contig1637:7466..74701691683030.9819956-UTR-L-elsbetiae_contig1637:7466..7470Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1637 7467..7470 +
1622815676.1242645-UTR-L-elsbetiae_contig1637:17130..172821622815676.1242645-UTR-L-elsbetiae_contig1637:17130..17282Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1637 17131..17282 +
1691683031.0790508-UTR-L-elsbetiae_contig1637:17130..172821691683031.0790508-UTR-L-elsbetiae_contig1637:17130..17282Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1637 17131..17282 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815676.0130632-CDS-L-elsbetiae_contig1637:7470..76381622815676.0130632-CDS-L-elsbetiae_contig1637:7470..7638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 7471..7638 +
1691683030.993758-CDS-L-elsbetiae_contig1637:7470..76381691683030.993758-CDS-L-elsbetiae_contig1637:7470..7638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 7471..7638 +
1622815676.0263548-CDS-L-elsbetiae_contig1637:8292..85271622815676.0263548-CDS-L-elsbetiae_contig1637:8292..8527Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 8293..8527 +
1691683031.0030272-CDS-L-elsbetiae_contig1637:8292..85271691683031.0030272-CDS-L-elsbetiae_contig1637:8292..8527Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 8293..8527 +
1622815676.0398388-CDS-L-elsbetiae_contig1637:9977..101381622815676.0398388-CDS-L-elsbetiae_contig1637:9977..10138Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 9978..10138 +
1691683031.011661-CDS-L-elsbetiae_contig1637:9977..101381691683031.011661-CDS-L-elsbetiae_contig1637:9977..10138Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 9978..10138 +
1622815676.0505562-CDS-L-elsbetiae_contig1637:11630..118001622815676.0505562-CDS-L-elsbetiae_contig1637:11630..11800Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 11631..11800 +
1691683031.0218177-CDS-L-elsbetiae_contig1637:11630..118001691683031.0218177-CDS-L-elsbetiae_contig1637:11630..11800Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 11631..11800 +
1622815676.064141-CDS-L-elsbetiae_contig1637:13029..131651622815676.064141-CDS-L-elsbetiae_contig1637:13029..13165Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 13030..13165 +
1691683031.030584-CDS-L-elsbetiae_contig1637:13029..131651691683031.030584-CDS-L-elsbetiae_contig1637:13029..13165Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 13030..13165 +
1622815676.0773027-CDS-L-elsbetiae_contig1637:14409..145201622815676.0773027-CDS-L-elsbetiae_contig1637:14409..14520Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 14410..14520 +
1691683031.0391543-CDS-L-elsbetiae_contig1637:14409..145201691683031.0391543-CDS-L-elsbetiae_contig1637:14409..14520Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 14410..14520 +
1622815676.0907753-CDS-L-elsbetiae_contig1637:15657..157501622815676.0907753-CDS-L-elsbetiae_contig1637:15657..15750Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 15658..15750 +
1691683031.0494323-CDS-L-elsbetiae_contig1637:15657..157501691683031.0494323-CDS-L-elsbetiae_contig1637:15657..15750Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 15658..15750 +
1622815676.1040237-CDS-L-elsbetiae_contig1637:16319..164571622815676.1040237-CDS-L-elsbetiae_contig1637:16319..16457Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 16320..16457 +
1691683031.0620322-CDS-L-elsbetiae_contig1637:16319..164571691683031.0620322-CDS-L-elsbetiae_contig1637:16319..16457Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 16320..16457 +
1622815676.1141868-CDS-L-elsbetiae_contig1637:16971..171301622815676.1141868-CDS-L-elsbetiae_contig1637:16971..17130Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 16972..17130 +
1691683031.070378-CDS-L-elsbetiae_contig1637:16971..171301691683031.070378-CDS-L-elsbetiae_contig1637:16971..17130Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 16972..17130 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1637.4332.1prot_L-elsbetiae_contig1637.4332.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1637 7471..17130 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1637.4332.1

>prot_L-elsbetiae_contig1637.4332.1 ID=prot_L-elsbetiae_contig1637.4332.1|Name=mRNA_L-elsbetiae_contig1637.4332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=457bp
MALCLALVHLKPRYGFEVVGIHIDYGNRHESGREADFVEGWCARHGVVFF
KRAIAEVRRGVTGREEYEKVAREIRFDAYKAALRGRGGGAAEAVGEGGGQ
GASCPAVMFGHHEGDVEENVVTNLIKGCSILELAGMLPENTVNGVRVWRP
MLPFGKGVVYDFAHRFGVPYFKDTTPSWSTRGKLRRQLIPLMEDVFGSGV
LGHLSAVARESDDLRGLVHRELFQPVWDKAVFQPLGMHLDVETYRGHGLL
FWKEVLRRLVHSMGMPMVRDKTLGMFVRDTLQRDMGVPLKDKWVELRKEY
VGFLKEGRLYVFRTGVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITTV
EGEAKQPQDLQGMERGRPPAANTPPFRTMEELMDGELSYVVAVPDTREAG
LTVQPGARARAPAWRDVDARIRRGIPLVAPPLCRDPVPLAVSGARMVTVT
LKYTGA*
back to top

mRNA from alignment at L-elsbetiae_contig1637:7467..17282+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1637.4332.1 ID=mRNA_L-elsbetiae_contig1637.4332.1|Name=mRNA_L-elsbetiae_contig1637.4332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9816bp|location=Sequence derived from alignment at L-elsbetiae_contig1637:7467..17282+ (Laminarionema elsbetiae ELsaHSoW15)
CTCCATGGCCCTGTGCCTGGCCCTCGTGCACCTCAAGCCCCGGTACGGCT TCGAGGTGGTGGGCATCCACATCGACTACGGCAACAGGCACGAGAGCGGC CGCGAGGCGGACTTCGTTGAGGGGTGGTGCGCCCGGCACGGCGTGGTCTT CTTCAAGAGGGCCATCGCAGAGGTAACTTTGGGCAAACCGAGACTATGAC TATGAACGGGGGTCCGTTCGTCGCTCGAGACACAAGGTATACCTACCTAC CTACCCCCGTGTTGTTTTATCTTTTCCTCCCCGTGTTTGGGAGGGGAGGG GGGTGCCGTAGACGGGGGGGATCTGGGGGGGGGGGGGATCGGGCGAAAAT ACCGGGGTGGTGGAGAGGGTGAATGAACCCTCGCTTTTTTTTATTTTATC GTGTCAAACGTTGAAAGTCGTTGCGATCTCTGTGCTCAGTAGAATTTGTC TACAGCGCTACATTACCCAGCTGACACATTCTGGGATGGTAAGATACATC CGATAAAAATGGGTGTTATTTAGTGGGCACACGAGAGAAAAAAGAAACAG TAGTGACGGGGCTGCAGGGACGAAAGAAAGTTATTGTACATAGACGCAGC AGTGGTGGCATCAGCGTGGGTGGGAAAGAAAAAAACTGACGTCTACAACA GGGTTTCTCTCTCCTCCTCTCTCAAGGGGTTATGTGTAGCGCCTACCAGT GCACCGCGTAACCAACTAACCCCCATGGCTCGACTTGGTTCAGCTCATCT GGCTGGCCGCTGCCCCCCCCCCCCCCCCCCCGACCCCCGACTCGATTCGA TTCGATTCTCGGTTCGGTGACGTCAGGTGCGCCGGGGCGTCACAGGTCGA GAAGAGTACGAGAAGGTTGCCCGCGAGATCCGCTTTGACGCCTACAAGGC CGCGCTCAGAGGGAGGGGGGGGGGTGCAGCGGAAGCGGTTGGGGAAGGGG GGGGGCAGGGGGCGTCGTGTCCAGCGGTGATGTTCGGGCACCACGAAGGC GACGTGGAGGAGAACGTGGTGACGAATCTCATCAAGGGCTGCAGCATTCT GGAGCTGGCAGGTAGGTCGCGGTGGTGGTGGTGAGTCGCGGTGGTGGTGG TGGGTCGCGGTGGTGGTGGTAGGTCGCGGTGGTGGTGGTGGGTCGCGGTG GTGGTGATGGTGGAGGTGGCGGTGGCGTTGTCAAGTTGTTGTTGTTGGTG GTGGTGGTGGTGGTAGTGGTGATGGTGGTGGTGAGGCGTCCGCTTGATGC ATTGCAGAGGTGTAGGTGTATTTATGTATATGCTGCCATGGTCCATTTTT GTTGTGTATGGTGTCATGTAAGGGTCTTCTCGGTGCTATTGGTCCGCTGC GCGCGTTTCTGTTTGGGGGGTGGGGATGCACGCGCTGTTGTTGCCGCGTG GTTGGGCATTAGCTGCGACGAGATTGATTGGTGGCACGTACATTGTGCCG AGATTATTTTCGCGGCGGGGCATGTTTGTGGACGGATGTCGGCGAGTGCT CATCCGTGTGTATGTGTGTCGTACGTGTTGACGTGCGCTGTTACCCTTTC GAGTCCCGCCGCTGGGCTGTGTTTTCGCGCACCGGGGCGGCGGCAGTACG TCTCACGTCGCTGTGTCCGACGCAGATATCGCATGTAAATGGCTAGCTAG CTCTCTGCGCTCTCCACACACTAGGGCCCTTTTTCAAGTTTCTTTTTTCC AGGGGGCTCAAGGAGACTGACACATGCTCATGCTCACGTTAGTACGATAG GGGGGGGGGGGGGGGGGGGGGGTTCGGCTGTGGATCGGTTTTTTCCTGTG TGTCTTCTTCCCCTTTTCTCTCNNNNNNNNNNGTGGGTGGAGGGGGTCGA GACGCCCCTGCAAACAAACCCCTACCTCCCTACGTCACCCTCTTTTTTAC CCCCCCCCCCCCCCCCCCCATTTTAGGCTACCCTTATTTGCACGACGCGA GTGCGAATAAGACGTGCACGCTTTCCAAGTGCCTCTTGGCACGCCTCGTG GCAACACTTTGCGAGATTATGCCGCTCCCGACCCAACCCAACCCCAGCCA GCCCCAACCCTAACCCGAACCCAAACGCTTGACCGCTGGGGTGATCGGGT GCGAAAGGGGCCTCTGCGCGGGCCTCGCCCCGCGCTCGGTTGGCGTTCTG GCAAACAAAAACAAGAACCGTGCGGCGGCTCTTTCGGCCAATCAGACACG AGGCGTGCACGTTTTGTTGTTCGCACTCGCGTCGTGTGCAAAATAGCGGT TGCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCACAACTCGCCCCCCCC CCCCCCCGCCCCCCCCCCCCCCCCCCCCCCGCCCNNNNNNNNNNTGGCGT CCGCTCCCACACACCCAGGCGTGGCGGCCTTTTTGGTTTTCGCCCCCGCG TGGGGTGCAAAACAGCCGTTGCCCCCCCCCCCCCCCCCCCCCATTTTAGT CCTCCAAAATATCGCTCGAAGCAAACACGGATCCATCCCCCCCTCTGCCC GGTCATGGCAGGCATGCTGCCGGAAAACACGGTGAACGGGGTCCGGGTGT GGCGGCCGATGCTCCCGTTCGGGAAGGGCGTGGTGTACGACTTCGCGCAC AGGTTCGGGGTGCCGTACTTCAAGGACACGACGCCTTCGTGGTCCACCCG GGGAAAGCTGCGCCGACAGCTGGTGAGAGCCTGGTCAGCGGTGTTTTGTT ACGTTGGGGGGGGGGGCGGCAGATAATTACCCTAGAAGGGGCTCGGCAGA TGTGATACGGTTCGCGGGACTCCTCCATATACCATCAGGTTATACAGACT GGACCGCTCGGGGCACGCACGTGCTTTGGCAGAGATAACTCGGCCCGGGG AGCCCGAAACACAGATTGTGACGGTTCGACTACTGAGCAGTAGGCAGCTG TGAGAGAGCCTAGATGCATCAATACAGAACGCGCCATCACTGAAGAACCT CCTATTTTGAGCGAGGCTCGGGTTCTTATTTCTAGATCTGTGGGGAAACC AATTGCCTCCATTTCGCCTTCATATTTATAGGTTTCTTATCCGGGCATCT TATCTCAATGAGCCTGGAGTTGTCATATTTGATTTTTTTGAGGCTGGATT TTGTCTCTCAAGCTCTCTCACGTGGTGGTGCGTTCTGTATCTGGAGACGT GTTATTTCACGGGACGGGGATGGGTGGACGTGTGGGTTAGTTAGGCAGGC AGGCAGGCAGGGGGAAGGTCACGCTGGTTGTGTTTGTGCCGCATGTGCAC ATATGTGGATGTACATATATTTGTGCGGGCGGATAAAGGGAAAGAAGCGT TTTGATGAGTCGTCGGCAAAGTGCCGGCCTATGTACCGCGATGGATGGAC CGTGGAACACCCATAGATACATAGATACGCGCGGAGCTTTGCTCCCAAGT CGTCCCTTGCGGTTGGGGGGGGTTCGGTGCGTAAATACCCCCCCCCCCCC CCCCCCGTACTTTTACCTCTATTGAAGGCTGCTGCTTTTTGGCGTCTGAA AAGCCCAGTCATCCCGTTGTCTATCCAGTTTAATCCCAGAGGGCCGAACA CTTGGAGGGACAGGCAGGCAACTAGCCGAACCGCTCGGTTCGCACATCTT CCGCGGCGGCCTTGCGGACCATCTCTCTCAACTCTGGCTTCCGCCGCGTT TTTCAGCTTCTTTGTTTTTATTTTTACGGTCGCCAGTTCCTGTGGTTTTG GCGGATGAATTCCCGTTTGTTGTTGATTCTCACATTGGTTCTCTAGTCCT GAAGCATCCTTGGGGGCCCGTGGTCACAAAACAAGGCACACTCGACGCCG CGGAAGAAAACATAAAACAAACACAAGCACGTACGTCCAACCTGTGAAAA GTGCGTTCCAGGGGAACTACTACTGTACTGCTATAATACTGTTGTAGACA CACTACCGCCGTTTTGCATCTTTTTGTGGCTGCGGTTCCTCCGCCACAAG GAGTATTTTCCTGGTTTTATCAAGGTCATGTGCGCGCTCTCTCTCTCTCT CTCTCTCTTGTTCTCTTTGCGATTTTCTCCTTGTGGTTTCATTTTACTTC GTGTCGTGTTTCGTCTCTCGTCTGGTTTCGTCACATTTATTTATTTATTT TCGTTTCCTTTCTGTTTCGCCACTAAATTACATACGTACATATTACACAC ATACACACATGTAGATCCCGCTCATGGAGGACGTGTTCGGCAGCGGGGTT CTAGGACACCTGTCGGCGGTGGCTAGGGAGTCGGACGACCTGAGGGGGCT GGTGCACCGGGAGCTGTTTCAGCCGGTCTGGGACAAAGCCGTCTTTCAGC CGCTCGGGATGCACCTCGACGTGGAGACGTACAGGTGGGGCGTGCGGACT GTTGGTGTTCTCACATTAGATACAGGTAGGGGACGTATGTTGTTGTTTTC ATCACATTATGTACATACATACAAGATCACCCTTCGGAGCGAGCTCATGA GAGCACAGGGGACGGGGGTGATGCAAGACGAAAGAAAAAAGAATAACCCA GATCTTTGAACCAAAGATTCTGAACTCGAACGCCTCTTTTCCCGCAAAAA GCACGTTATAGATCAGACGTAACAGCTGCCCTCCTAAGCACAGCAACAGC ACCAACTGGGTGCTTCTGTGTGGGCACTCCGCCCTTGATCAACAAGCTCC GCCTTTGTCAACACAGAGCTGTGCGGGTCAACACAGCTGCGCAGGTCTGT GCCCCTCAGCCGTATGTTATTTGTACCGAAAAAAAAAACAGCTGCTGCTC TGACGTGTTTTTCTTCAACTGAAAGAGAGCTGCTGTCATCCTGACGTTCG TTTGGGCCATTGCAGGCCGACAGCCTACCGACAGCCTACTGATGACATAT CGGAACAGTAGTTTTCCCGTTCAAATGTATCCATGTATGTATTTACATAG CTGTATCCCGAAAAGTTCCAGCCTGTGGTCGCAAAATTGCTGGGGCCATC GTCAGAAGACCCGAGAAAAAAACGCACGTACACCGGAAAGAGAGGCTGCA CGAAAGACCGAAGAGGAAAAAAAATACACCGAAAATCTGTAGGGTAGGTA GTAACCACCATGGCCGGGTACCGCCGAATGTACATCGGGCATATGCGTAC ACATGTAGTACATACATGTGCATCCGTCCTGTGTCGCTTGCGTTCTCTCT CTCTCTCTCTCTCTCTCTTCATGTTGTCCTTGCCACCGTCGTGTTGTGTC TTGGATGTTGCTTGCTTGGCCTGGAGGTACACTCGTCCGAGCGATATTAG TCTCTTCGCCGATCTCTCGAGACAAAGCTCGGCAAACTGCAGCAGTGTAC ATAAACAAGGCTGCATGTGCTTAAATGCGGTTCACACATAGATGTATCGC GCTGTGATTTGAGGTGCAAAAGGCGTGTGTACGGATGTACATACGTACCG CGTGAATCGTTGCATATCCCGCTTTTGTTACGTTTCTTGGCTTCGGAGTA CTCTGCCCTTCCCACCTTACATGCCTCTCCTCCCGCGCCCTCCCTCCCGC CCTTCCGCCCTGCCCGCATACCGCAAACGCACACACACACACACACACAC ACACACACTTAAGGGGGCACGGGCTGCTGTTCTGGAAGGAAGTGCTGCGG CGCCTGGTGCACTCGATGGGGATGCCCATGGTTCGAGACAAGACTCTGGG CATGTTCGTGAGGGACACGCTGCAGAGAGATATGGGCGTCCCTCTCAAGG TAGGTACACATAACTTTTTTTGGGTATGCGAAAATTGACTGCACGGACCC TCCCAGAAGCACCACTTTTCCAGTTCGGCCCTCAGCGTGCCGCTGCGATA TGAAATCACCCACTCCATCGCCACAGGTTGCAGTTCTCTGCAGATAAACC CTCCGCTTCTAATTTTTAGCTGTCTTGATGGCGGAGATTTTCCTCTCCGA AGATGCAAAAATCACTGATTTCACAGGACTGTCAGAGATACACAAACTAA ATTTGGTGTTCAAGAGATCAGATAGCTTACCCCTCACAGGCAAGAACAAC GGAAGATGCTGGGAGGGCCTACTGATATGGTTTGTAGGGGGCGCCGCATG TCGTTGGTAACAGCAGCAGATAGCTATGAGACACGCTTTCGATATTCTGG TGCGCACGAGCGATGTTTTCAGCCGTTCCTTTTTCGGATAATCGGATGAG GAATTCAAGCGACGCCCCGGAGTCCCACGCCGTGGTTTTTACCTCAATCA AGAAACGGACTCGACGCGAATGTAGCCCGGCTGTTTTGAAAAAGTGTGTA CTAGTGACTTCTATCTACAGCAATTTTGTGCATACTTCACCACTGTTCAC ACGCGCAAGGGGTGGGTTGAAAATTCCCCGCGAACACAGCAAAAAAGAGC CGACAATCTCGGAACACCGCTGTTTTTTGGCTGCACTGTTAGAACATGCG GGCATTTTTAGAAAGCCCGCACAAACTTCAAGTGAGGCTCCGTGATGTTC AGCAGGGGTATGCGATTATTCTTCGAGAAAGGCCTATACTGATCAATTGG TACCCCTTACCGTATATACCCTTGAACGTTTTCGGGGGGAGTTTTTTTCT CTCTTCTCGTTTGCTCTTTTTCGTTTTTGCATTTTTTCGTTTGCCCTTTT TCTTCTCGTCTCCGAAAACTGGAAAGTAAGGAGGTCACCGCCAAGTATTA TTGACCGTCCATCCACAGCAGTGGCGGGCAGGCCTTCATAATCAATACGA AAACGCTATGCTTTGCTCTGTTTTAGCTTCGTGATACGTTAAAATACAAG TTGGCATCTATCGTGAGCGCCGGCGGAAAAAGCAGTCCCGTTTATAAATA CTTACGACGTTGAGTTTGTCTCTGGTCGCGGTTTTCGGTTCCCGCCTGCT TGTGTTCCGGAGCCGGCGTTCCGGTACTTTTCGTGATGTCTTATACGGAG CATTTGATTGTTTTGTTTTGTGTTTGTCTTGTTTTTGTTTCAGGACAAGT GGGTGGAGCTGAGGAAGGAGTACGTGGGTTTCTTGAAAGAAGGGAGGCTT TACGTTTTCAGAACGGGCGTTTTCCTGCCGCCCAATACTTCCTACGGCGA GAAGGTAAACAACCCGCAGAACCGGCCGGTATCACCGATGTTAACTATTT AGGCACGTTATTTTCTCACGACAGCAGTGTATTGGTCACACGCTAATTTT CCACCTTGGAAAGAGAAAGAGAGAGGGAGAGAGAGAGAGATAGAGGGGGA GGGTCAGAACTATGCTACTCCCGAATGGCCCTCTTATCCACACTTTTTCC AAGTATTCTGTCCATCAGACATGCGGATCGCTGTGAATACAAGTATCCCC CTCCCCCCCCCCCCCCTCCCTCCTCCTTTTCGGGTGGTTGTTGCTCGACT GCTCGACTGTTCACCCCGAATTCCCATCTTGATTGCTCCGCGACACGGTG GTGTCGGGGTAAATAAGCGAAACACGGTGAGGGGGTAACCGAAATCGTTT TTTATTTTTATTTTTTTTCTTGCAGGAAAGTAAAGAGGGGGCGCGTTGCG TGTGCCATGTAGAACTGGATTTATAGCTTGTCGGATAAGAGGGATACACT GCAAGAAGCGTCGCCGTGGTGTACTACTGATGTTTTTTTTGTAGTCTGAC CGATATGTCTCGTACATACCTCGATGCATGTGACAGCATGCAGCCAACCA ACCTCCTGACCCTTTGCCACGTCTTCCCAGGACCACGAAACCCCCTTAAC TCCCCCTCTCTGAGCCAGCAGTTGTGCAGCGATGCGGCCGTCTGCTAGTC TGCGTTTCAGTATGGAACCATAACCATGTAGGAGTATAAACCTACACCAC TTTATCGTGGAAGTAATGCTGACTTGTACTATTGCTAATTGAGTTGGTAG ACGTTCGATTTATTTTCATGACCGACGATATGAGCACGAATTATCTCTCT CTCCATCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCC ACCCTCCCCACATATATAGAAGTATGCTTATGCCTCCTTCTCTCCCCCGC CCCCCCCCCTCCCCTCCCCCCTCTCTTTCTTCTCTCGTCTCCTCCCTCTC TCTGTCTCCGCCTCTGCTGTTGACGAATGCAACCTTGTCATGTTGTAATG TGCAAAAACGCACTATCCACGTGCATTAACTCTCCACGTGTGCCTTGCGA CAACCAACCACACAACAACAACGACGTGTCTAATCTGGAAGGCGGAAGGC ACTCCGGTCCCGCTCGACGGCGGTCTGGTGCAAGTCGGCCCGTGGAGAAT CACGACGGTGGAGGGAGAGGCCAAGCAGCCGCAGGTTAGTTAGGCGAAGT GTTGTACCTGGTTGAGAGGGGTGCTTCGAAGCACACAGACAAGCAGAGGC CAACACGCAGCAACGGCGTTGCAGCAGCGTAGCGACGTGTGGTGTGGAAA TTTGCGTGCGGCGGTTGTCGCACAGCAGTTTTGGTGTGAACGTTTGTCTG CTATTCTTGCCGTCTAACTTTTTCTCGTTTCGTCGTCGGCGCCTTCTTTG GATTTGGTGGGATGCGTATTTAGCGGCGAGGTGTGGTTGCTGCTGCCGTT GCTTGTTGTTGATGTGTGACTACTGCTGCCGTTTTTCGTCTTCACACTGC TGTTGGCGTTGGAGTTGTTTGAGCGGGAGTAGTTTTTTTTTATTGCCCAC TCGCTCGGGTTTTATGTGCTTGGTGCGCAACGCCGAAGCCAAAAAAGCCG CCGCGAATGACTCGGAGTAAGGTAAATCCTGCGAACAAAACGTGCTGCGA GGTAGCTGCCGCGCCGAGAGAAACAAAACAAAACGCAAAAAAACAATCAG CAAAGAAACAGAAAGATGCACATACGACACGACCAAACGACACGATTGCG CAGGACCTGCAGGGGATGGAGCGCGGGCGCCCCCCGGCGGCAAACACGCC ACCCTTTCGCACCATGGAAGAGCTGATGGACGGCGAGCTGAGCTACGTTG TGGCTGTACCGGACACCCGAGAAGCTGGCTTGACAGTGCAGGTGCGTTTT TTTGGACGTGTCGTTACGTATGTACGTACTCCTTGTTGCTCTTCTTTCTC TGTGTTGCCACAGACATGCAAAACAGCATCGATCTGGTCCTGCGGATGAG TTTTATGCGGGTGGCGGACGTTATCGCGGCGGCCATTTTTCTCTCTGTGT AGCCCCCCTTGTTGGGTTGTAACTGTTTTGAAGGCCTGCGTGTCTGCCTG TATGGTTTTTGTGTTGTGCGTTTATGTAGCTGTGGGCAATTGCCCGGAGG CAGCTCGGAGGGACGAACCAGATCTACCAAAAAAAGTGGCGTGTGCACGT ACGCGACGTTCGGGGTTTCGCCTAGTTAGCGTGGGGGGGGGGGCGAAACA ACACCTGTATATGTATCTTACCGTTTGTTGCACCTGTGTCCACCAACCTG CGACAGATAACTTACTTACCCCCCCCTCTGTTCATGCGGCTGCTGTCTCT TTTCGTGTTTCACGCCTATCGGCGAACGAATCCAATCCATCGCGAACCAT CCCAGCCCGGCGCGAGAGCGAGGGCTCCGGCCTGGCGAGACGTCGACGCC CGCATCCGCCGCGGCATACCCCTGGTCGCGCCACCACTCTGCCGCGACCC CGTCCCTCTGGCGGTGAGCGGCGCAAGGATGGTGACCGTTACGCTCAAGT ACACGGGCGCGTAACAGATAGAGCACGTGTAAGCCTCTTAAGAGGCACGG ACGGTGCACGCTCGGCGAAGGAGTGACAGGGGACAGAAGACACCCCACCC GGAAGTAATGTAGCCGGTAGTTACAACGGAGCTCGATGGATGCAGTGAGG TTGGGCGCAGAAGGAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1637:7467..17282+

>mRNA_L-elsbetiae_contig1637.4332.1 ID=mRNA_L-elsbetiae_contig1637.4332.1|Name=mRNA_L-elsbetiae_contig1637.4332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2742bp|location=Sequence derived from alignment at L-elsbetiae_contig1637:7467..17282+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCCTGTGCCTGGCCCTCGTGCACCTCAAGCCCCGGTACGGCTTCGA
GGTGGTGGGCATCCACATCGACTACGGCAACAGGCACGAGAGCGGCCGCG
AGGCGGACTTCGTTGAGGGGTGGTGCGCCCGGCACGGCGTGGTCTTCTTC
AAGAGGGCCATCGCAGAGATGGCCCTGTGCCTGGCCCTCGTGCACCTCAA
GCCCCGGTACGGCTTCGAGGTGGTGGGCATCCACATCGACTACGGCAACA
GGCACGAGAGCGGCCGCGAGGCGGACTTCGTTGAGGGGTGGTGCGCCCGG
CACGGCGTGGTCTTCTTCAAGAGGGCCATCGCAGAGGTGCGCCGGGGCGT
CACAGGTCGAGAAGAGTACGAGAAGGTTGCCCGCGAGATCCGCTTTGACG
CCTACAAGGCCGCGCTCAGAGGGAGGGGGGGGGGTGCAGCGGAAGCGGTT
GGGGAAGGGGGGGGGCAGGGGGCGTCGTGTCCAGCGGTGATGTTCGGGCA
CCACGAAGGCGACGTGGAGGAGAACGTGGTGACGAATCTCATCAAGGGCT
GCAGCATTCTGGAGCTGGCAGGTGCGCCGGGGCGTCACAGGTCGAGAAGA
GTACGAGAAGGTTGCCCGCGAGATCCGCTTTGACGCCTACAAGGCCGCGC
TCAGAGGGAGGGGGGGGGGTGCAGCGGAAGCGGTTGGGGAAGGGGGGGGG
CAGGGGGCGTCGTGTCCAGCGGTGATGTTCGGGCACCACGAAGGCGACGT
GGAGGAGAACGTGGTGACGAATCTCATCAAGGGCTGCAGCATTCTGGAGC
TGGCAGGCATGCTGCCGGAAAACACGGTGAACGGGGTCCGGGTGTGGCGG
CCGATGCTCCCGTTCGGGAAGGGCGTGGTGTACGACTTCGCGCACAGGTT
CGGGGTGCCGTACTTCAAGGACACGACGCCTTCGTGGTCCACCCGGGGAA
AGCTGCGCCGACAGCTGGCATGCTGCCGGAAAACACGGTGAACGGGGTCC
GGGTGTGGCGGCCGATGCTCCCGTTCGGGAAGGGCGTGGTGTACGACTTC
GCGCACAGGTTCGGGGTGCCGTACTTCAAGGACACGACGCCTTCGTGGTC
CACCCGGGGAAAGCTGCGCCGACAGCTGATCCCGCTCATGGAGGACGTGT
TCGGCAGCGGGGTTCTAGGACACCTGTCGGCGGTGGCTAGGGAGTCGGAC
GACCTGAGGGGGCTGGTGCACCGGGAGCTGTTTCAGCCGGTCTGGGACAA
AGCCGTCTTTCAGCCGCTCGGGATGCACCTCGACGTGGAGACGTACAGAT
CCCGCTCATGGAGGACGTGTTCGGCAGCGGGGTTCTAGGACACCTGTCGG
CGGTGGCTAGGGAGTCGGACGACCTGAGGGGGCTGGTGCACCGGGAGCTG
TTTCAGCCGGTCTGGGACAAAGCCGTCTTTCAGCCGCTCGGGATGCACCT
CGACGTGGAGACGTACAGGGGGCACGGGCTGCTGTTCTGGAAGGAAGTGC
TGCGGCGCCTGGTGCACTCGATGGGGATGCCCATGGTTCGAGACAAGACT
CTGGGCATGTTCGTGAGGGACACGCTGCAGAGAGATATGGGCGTCCCTCT
CAAGGGGGCACGGGCTGCTGTTCTGGAAGGAAGTGCTGCGGCGCCTGGTG
CACTCGATGGGGATGCCCATGGTTCGAGACAAGACTCTGGGCATGTTCGT
GAGGGACACGCTGCAGAGAGATATGGGCGTCCCTCTCAAGGACAAGTGGG
TGGAGCTGAGGAAGGAGTACGTGGGTTTCTTGAAAGAAGGGAGGCTTTAC
GTTTTCAGAACGGGCGTTTTCCTGCCGCCCAATACTTCCTACGGCGAGAA
GGACAAGTGGGTGGAGCTGAGGAAGGAGTACGTGGGTTTCTTGAAAGAAG
GGAGGCTTTACGTTTTCAGAACGGGCGTTTTCCTGCCGCCCAATACTTCC
TACGGCGAGAAGGCGGAAGGCACTCCGGTCCCGCTCGACGGCGGTCTGGT
GCAAGTCGGCCCGTGGAGAATCACGACGGTGGAGGGAGAGGCCAAGCAGC
CGCAGGCGGAAGGCACTCCGGTCCCGCTCGACGGCGGTCTGGTGCAAGTC
GGCCCGTGGAGAATCACGACGGTGGAGGGAGAGGCCAAGCAGCCGCAGGA
CCTGCAGGGGATGGAGCGCGGGCGCCCCCCGGCGGCAAACACGCCACCCT
TTCGCACCATGGAAGAGCTGATGGACGGCGAGCTGAGCTACGTTGTGGCT
GTACCGGACACCCGAGAAGCTGGCTTGACAGTGCAGGACCTGCAGGGGAT
GGAGCGCGGGCGCCCCCCGGCGGCAAACACGCCACCCTTTCGCACCATGG
AAGAGCTGATGGACGGCGAGCTGAGCTACGTTGTGGCTGTACCGGACACC
CGAGAAGCTGGCTTGACAGTGCAGCCCGGCGCGAGAGCGAGGGCTCCGGC
CTGGCGAGACGTCGACGCCCGCATCCGCCGCGGCATACCCCTGGTCGCGC
CACCACTCTGCCGCGACCCCGTCCCTCTGGCGGTGAGCGGCGCAAGGATG
GTGACCGTTACGCTCAAGTACACGGGCGCGTAACCCGGCGCGAGAGCGAG
GGCTCCGGCCTGGCGAGACGTCGACGCCCGCATCCGCCGCGGCATACCCC
TGGTCGCGCCACCACTCTGCCGCGACCCCGTCCCTCTGGCGGTGAGCGGC
GCAAGGATGGTGACCGTTACGCTCAAGTACACGGGCGCGTAA
back to top