mRNA_L-elsbetiae_contig1637.4331.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1637.4331.1
Unique NamemRNA_L-elsbetiae_contig1637.4331.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Match: D8LRA2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA2_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 2.050e-116
Identity = 179/216 (82.87%), Postives = 190/216 (87.96%), Query Frame = 2 
Query:  359 EEDEAERVLSLWFDGSTTDNHRTKWFAQGDAIARVDETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGEPDRDERVGGCDRQALPLAEALLERGWQHGLAAEQHVFALMPLRHTPSEERLVRVMEEATAREERLVQSQELLKRFKKATNRRLQGIQDRAEEGAEILEHLEFVPPDPSQMDKHELVKVLRVFLEARGAAEGA 1006
            EE+E E VLSLWFDGST DNHRTKWFAQGDA+ R+DETIRK FG LVLRAEAG LT SWSERPRS+VALILLLDQFSRH+FRG PDRDERV  CDR ALPL EALL+RGWQHGL AEQHVFALMPLRHTPSEERL+RVM+EA  RE RL QSQELL+RFKKAT RRLQGIQDRAEEGAEILEH EF PPDPSQMDKHELVKVLR FL+ +GA   A
Sbjct:   44 EEEEVESVLSLWFDGSTADNHRTKWFAQGDALPRMDETIRKGFGILVLRAEAGQLTDSWSERPRSMVALILLLDQFSRHLFRGAPDRDERVERCDRLALPLTEALLDRGWQHGLTAEQHVFALMPLRHTPSEERLLRVMQEAEERETRLRQSQELLQRFKKATKRRLQGIQDRAEEGAEILEHFEFDPPDPSQMDKHELVKVLRGFLDTKGAVATA 259
[Close]
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Match: A0A397BYC8_9STRA (tRNA(Ile)-lysidine synthetase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BYC8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 7.240e-33
Identity = 89/226 (39.38%), Postives = 125/226 (55.31%), Query Frame = 2 
Query:  350 EEGEEDEAERVLSLWFDGSTTDNHRTKWF--AQGDAIARVDETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGEPDRDERVGGCDRQALPLAEALLERGWQHGLAAEQHVFALMPLRHTPSEERLVRVMEEATAREERLVQSQELLKRFKKATNRRLQGIQ--DRAEEGAE--ILEHLEFVPPDPSQM-DKHELVKVLRVFLEARGAAEGA 1006
            E GE   AE VLS WFDG   + HRTKWF  +  D  A  D  I   FG L+  AE  AL ASW+ RP S VALI+LLDQF RH++R + D+ + +   D  AL LA   ++ G    ++    VFALMP RH+P+ +RL  V+     RE  ++   +LL +F++ T +R   ++  +  E G E  ILE   F+ P+ + +  KH LV ++  FL +  A   A
Sbjct:    5 EGGEATTAEEVLSYWFDGDMQELHRTKWFPVSGSDVQAATDADITSRFGTLLATAETRALHASWTSRPHSFVALIVLLDQFCRHVYRHDADKRKAI---DVLALELATQFVDAGLHLHVSVPHFVFALMPFRHSPTPDRLEHVLAHIDGRETTMLHDTDLLSKFRRTTVQRQSHLRVPNHREPGEEFDILERAAFLHPNEALLLPKHPLVPIMHAFLTSMRAGSDA 227
[Close]
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Match: W4GMR9_9STRA (tRNA(Ile)-lysidine synthetase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMR9_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.340e-31
Identity = 89/226 (39.38%), Postives = 125/226 (55.31%), Query Frame = 2 
Query:  350 EEGEEDEAERVLSLWFDGSTTDNHRTKWF--AQGDAIARVDETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGEPDRDERVGGCDRQALPLAEALLERGWQHGLAAEQHVFALMPLRHTPSEERLVRVMEEATAREERLVQSQELLKRFKKATNRRLQGIQ--DRAEEGAE--ILEHLEFVPPDPSQM-DKHELVKVLRVFLEARGAAEGA 1006
            E GE   AE VLS WFDG   + HRTKWF  +  D  A  D  I   FG L+  AE  AL ASW+ RP S VALI+LLDQF RH++R + D+ + +   D  AL LA   ++ G    ++    VFALMP RH+P+ +RL  V+     RE  ++   +LL +F++ T +R   ++  +  E G E  ILE   F+ P+ + +  KH LV ++  FL +  A   A
Sbjct:    5 EGGEATTAEEVLSYWFDGDMQELHRTKWFPVSGSDVQAATDADITSRFGTLLATAETRALHASWTSRPHSFVALIVLLDQFCRHVYRHDADKRKAI---DVLALELATQFVDDGLHLHVSVPHFVFALMPFRHSPTPDRLEHVLAHIDGRETTMLHDTDLLSKFRRTTVQRQSHLRVPNHREPGEEFDILERAAFLHPNEALLLPKHPLVPIMHAFLTSMRAGSDA 227
[Close]
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Match: A0A397EWL3_9STRA (tRNA(Ile)-lysidine synthetase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EWL3_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.620e-31
Identity = 89/226 (39.38%), Postives = 125/226 (55.31%), Query Frame = 2 
Query:  350 EEGEEDEAERVLSLWFDGSTTDNHRTKWF--AQGDAIARVDETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGEPDRDERVGGCDRQALPLAEALLERGWQHGLAAEQHVFALMPLRHTPSEERLVRVMEEATAREERLVQSQELLKRFKKATNRRLQGIQ--DRAEEGAE--ILEHLEFVPPDPSQM-DKHELVKVLRVFLEARGAAEGA 1006
            E GE   AE VLS WFDG   + HRTKWF  +  D  A  D  I   FG L+  AE  AL ASW+ RP S VALI+LLDQF RH++R + D+ + +   D  AL LA   ++ G    ++    VFALMP RH+P+ +RL  V+     RE  ++   +LL +F++ T +R   ++  +  E G E  ILE   F+ P+ + +  KH LV ++  FL +  A   A
Sbjct:    5 EGGEATTAEEVLSYWFDGDMQELHRTKWFPVSGSDVQAATDADITSRFGTLLATAETRALHASWTSRPHSFVALIVLLDQFCRHVYRHDADKRKAI---DVLALELATQFVDAGLHLHVSVPHFVFALMPFRHSPTPDRLEHVLAHIDGRETTMLHDTDLLSKFRRTTVQRQSHLRVPNHREPGEEFDILERAAFLHPNEALLLPKHPLVPIMHAFLTSMRAGSDA 227
[Close]
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Match: A0A418BYK5_9STRA (tRNA(Ile)-lysidine synthetase n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BYK5_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.350e-31
Identity = 89/226 (39.38%), Postives = 125/226 (55.31%), Query Frame = 2 
Query:  350 EEGEEDEAERVLSLWFDGSTTDNHRTKWF--AQGDAIARVDETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGEPDRDERVGGCDRQALPLAEALLERGWQHGLAAEQHVFALMPLRHTPSEERLVRVMEEATAREERLVQSQELLKRFKKATNRRLQGIQ--DRAEEGAE--ILEHLEFVPPDPSQM-DKHELVKVLRVFLEARGAAEGA 1006
            E GE   AE VLS WFDG   + HRTKWF  +  D  A  D  I   FG L+  AE  AL ASW+ RP S VALI+LLDQF RH++R + D+ + +   D  AL LA   ++ G    ++    VFALMP RH+P+ +RL  V+     RE  ++   +LL +F++ T +R   ++  +  E G E  ILE   F+ P+ + +  KH LV ++  FL +  A   A
Sbjct:    5 EGGEATTAEEVLSYWFDGDMQELHRTKWFPVSGSDVQAATDADITSRFGTLLATAETRALHASWTSRPHSFVALIVLLDQFCRHVYRHDADKRKAI---DVLALELATQFVDAGLHLHVSVPHFVFALMPFRHSPTPDRLEHVLAHIDGRETTMLHDTDLLSKFRRTTVQRQSHLRVPNHREPGEEFDILERAAFLHPNEALLLPKHPLVPIMHAFLTSMRAGSDA 227
[Close]
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Match: A0A3R7BUG7_9STRA (Oligopeptidase A n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BUG7_9STRA)

HSP 1 Score: 135 bits (341), Expect = 6.660e-31
Identity = 89/226 (39.38%), Postives = 125/226 (55.31%), Query Frame = 2 
Query:  350 EEGEEDEAERVLSLWFDGSTTDNHRTKWF--AQGDAIARVDETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGEPDRDERVGGCDRQALPLAEALLERGWQHGLAAEQHVFALMPLRHTPSEERLVRVMEEATAREERLVQSQELLKRFKKATNRRLQGIQ--DRAEEGAE--ILEHLEFVPPDPSQM-DKHELVKVLRVFLEARGAAEGA 1006
            E GE   AE VLS WFDG   + HRTKWF  +  D  A  D  I   FG L+  AE  AL ASW+ RP S VALI+LLDQF RH++R + D+ + +   D  AL LA   ++ G    ++    VFALMP RH+P+ +RL  V+     RE  ++   +LL +F++ T +R   ++  +  E G E  ILE   F+ P+ + +  KH LV ++  FL +  A   A
Sbjct:    5 EGGEATTAEEVLSYWFDGDMQELHRTKWFPVSGSDVQAATDADITSRFGTLLATAETRALHASWTSRPPSFVALIVLLDQFCRHVYRHDADKRKAI---DVLALELATQFVDAGLHLHVSVPHFVFALMPFRHSPTPDRLEHVLAHIDGRETTMLHDTDLLSKFRRTTVQRQSHLRVPNHREPGEEFDILERAAFLHPNEALLLPKHPLVPIMHAFLTSMRAGSDA 227
[Close]
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Match: A0A024TV41_9STRA (tRNA(Ile)-lysidine synthetase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TV41_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.850e-30
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 2 
Query:  371 AERVLSLWFDGSTTDNHRTKWF-AQGDAI-ARVDETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGEPDRDERVGGCDRQALPLAEALLERGWQHGLAAEQHVFALMPLRHTPSEERLVRVMEEATAREERLVQSQELLKRFKKATNRRLQGIQ----DRAEEGAEILEHLEFVPPDPSQM-DKHELVKVLRVFLEARGA 994
            A+ VL+ WFDG   + +RTKWF A G  + A  D  I   FGDL+  AE  AL A+W+ RP S VALI+LLDQF RH++R + DR + +   D  AL LA   +++     +     VFALMP RH+P+ +RL  V+    ARE  +V++ +LL +F++ T +R   ++       +E  +ILE   FV P+ + +  KH LV V+  FL +  A
Sbjct:    7 ADEVLAYWFDGDMHELYRTKWFPASGSEVQAAADADITARFGDLLATAETRALHATWTSRPSSFVALIVLLDQFCRHVYRHDADRRKAI---DVIALELATEFVDQQLHLNVPVPHFVFALMPFRHSPTPDRLEHVLAHIDAREHTMVENTDLLSKFRRTTVQRQAHLRAPNLKAPDEEFDILERAAFVNPNEATLLPKHPLVPVMHSFLTSMRA 218
[Close]
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Match: A0A7S0DQN4_9EUKA (tRNA(Ile)-lysidine synthetase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DQN4_9EUKA)

HSP 1 Score: 130 bits (328), Expect = 2.580e-29
Identity = 81/215 (37.67%), Postives = 120/215 (55.81%), Query Frame = 2 
Query:  368 EAERVLSLWFDGSTTDNHRTKWF--AQGDAIARVDETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGEPDRDERVGGCDRQALPLAEALLERGWQHGLAAEQHVFALMPLRHTPSEERLVRVMEEATAREERLVQSQELLKRFKKATNRRLQGIQDRAEEGAEILEHLEFV-PPDPSQMDKHELVKVLRVFLEARGAAEG 1003
            EA+RVL  WF GST +N R+KWF  ++ +    +D+ I K+FG LV  A  G LT  W+  PR  +A I++LDQFSRH++R  P+  E +  CD  A     AL++RGW   L+  +  FAL+PLRH      L+ V+ E    +    + ++LL RF++AT R LQG +    +  +ILE  +     D S +    L++ L+ FL  R   +G
Sbjct:   45 EAKRVLDFWFKGSTRENVRSKWFVPSRSERQRELDDRIGKEFGSLVEEASNGLLT-DWATTPRGALAAIIILDQFSRHVYRHGPE--ENLKSCDNLAHRFTRALVQRGWLDKLSLPEKCFALLPLRHRGDHNELLEVLREIGKIQSEFAEHKDLLSRFRRATVRSLQGAKSDPGDPEDILEREDTERQADCSTVFTEPLMRTLQDFLSTRLKEKG 256
[Close]
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Match: A0A225VYH9_9STRA (tRNA(Ile)-lysidine synthetase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VYH9_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.230e-29
Identity = 85/214 (39.72%), Postives = 122/214 (57.01%), Query Frame = 2 
Query:  368 EAERVLSLWFDGSTTDNHRTKWFAQG--DAIARVDETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGE--PDRDERVGGCDRQALPLAE-ALLERGWQHGLAAEQHVFALMPLRHTPSEERLVRVMEEATAREERLVQSQELLKRFKKATNRRLQGIQDRAE-----EGAEILEHLEFVPPDPSQMDKHELVKVLRVFL 979
            EA++VLS WFDG  ++ +R+KWF     D     D  I   FGDL+ RAEAG L  +W ERP + VALIL+LDQF+RH++R       +E++   D  AL + E +LL   W   LA  + VFALMPLRH+P+ +RL  V+     R +   Q  ELL++F++ T  RLQ ++   E        +ILE   F+  D S M ++ L + +  +L
Sbjct:    4 EAQQVLSFWFDGDQSETYRSKWFPSSGSDRQKATDVEISSRFGDLLARAEAGELE-TWRERPDTCVALILVLDQFARHVYRDRRITTNEEQLKRNDAHALAIVEQSLLPNCWHETLAVPRFVFALMPLRHSPTPDRLNEVLTAIEKRRQLQEQHGELLEKFRRTTTGRLQHLRGGPETTTDVSDEDILERA-FMETDESDMPRNRLYRAMDEYL 215
[Close]
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Match: A0A7S0T1Q2_9CHLO (tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T1Q2_9CHLO)

HSP 1 Score: 129 bits (323), Expect = 6.610e-29
Identity = 88/232 (37.93%), Postives = 125/232 (53.88%), Query Frame = 2 
Query:  329 MLSSSFGEEGEEDEAERVLSLWFDGSTTDNHRTKWFAQGDAIA----RVDETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGEPDRDERVGGCDRQALPLAEALL--ERGWQHGLAAEQHVFALMPLRHTPSEERLVRVMEEATAREERLVQSQE---LLKRFKKATNRRLQGIQDRA-EEGAEILEHLEFVPPDP--SQMDKHELVKVLRVFLEAR 988
            M+ ++  +E      + VLS WFDG   DN++ KWF  GD       RVD+ I + FG  V  AE G L +     P S VAL+LLLDQF+RH++R  PDRD +V   D  A+ + E  L  +R W   +    HVF LMPLRHT  ++ + R+     A +ER    +    LL +F+K T R LQ ++ +  ++G EILE  EF P D   + M  H + + +  FL A+
Sbjct:   22 MVDATQADEASAASVDDVLSFWFDGDLDDNYKRKWFPAGDKTGEMQRRVDDAIAERFGATVCAAERGDLDSWRVTSPSSAVALVLLLDQFTRHVYRHHPDRDAKVAAADAAAVLVTERCLATDRRWDLRVPLPHHVFLLMPLRHT--QKTVPRLRAALAAMDERRGADEAHAALLGKFQKTTLRCLQDMEGKQHQDGDEILEFHEFTPGDEVMAGMANHPVYQTVERFLRAK 251
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1637.4331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRA2_ECTSI2.050e-11682.87Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A397BYC8_9STRA7.240e-3339.38tRNA(Ile)-lysidine synthetase n=2 Tax=Aphanomyces ... [more]
W4GMR9_9STRA2.340e-3139.38tRNA(Ile)-lysidine synthetase n=2 Tax=Aphanomyces ... [more]
A0A397EWL3_9STRA2.620e-3139.38tRNA(Ile)-lysidine synthetase n=3 Tax=Aphanomyces ... [more]
A0A418BYK5_9STRA3.350e-3139.38tRNA(Ile)-lysidine synthetase n=5 Tax=Aphanomyces ... [more]
A0A3R7BUG7_9STRA6.660e-3139.38Oligopeptidase A n=1 Tax=Aphanomyces astaci TaxID=... [more]
A0A024TV41_9STRA4.850e-3039.53tRNA(Ile)-lysidine synthetase n=2 Tax=Aphanomyces ... [more]
A0A7S0DQN4_9EUKA2.580e-2937.67tRNA(Ile)-lysidine synthetase n=2 Tax=Amorphochlor... [more]
A0A225VYH9_9STRA3.230e-2939.72tRNA(Ile)-lysidine synthetase n=1 Tax=Phytophthora... [more]
A0A7S0T1Q2_9CHLO6.610e-2937.93tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=M... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1637contigL-elsbetiae_contig1637:1778..7356 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.9
Seed ortholog evalue6.8e-94
Seed eggNOG ortholog2880.D8LRA2
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Bacterial protein of unknown function (DUF924)
EggNOG OGs2D6B9@1,2T1ED@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF924
Ec32 orthologEc-06_003280.1
Exons7
Model size1205
Cds size1041
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1637.4331.1prot_L-elsbetiae_contig1637.4331.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1637 2298..7356 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815675.8738997-UTR-L-elsbetiae_contig1637:1777..18311622815675.8738997-UTR-L-elsbetiae_contig1637:1777..1831Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1637 1778..1831 +
1691683030.8940408-UTR-L-elsbetiae_contig1637:1777..18311691683030.8940408-UTR-L-elsbetiae_contig1637:1777..1831Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1637 1778..1831 +
1622815675.8868654-UTR-L-elsbetiae_contig1637:2188..22971622815675.8868654-UTR-L-elsbetiae_contig1637:2188..2297Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1637 2189..2297 +
1691683030.904592-UTR-L-elsbetiae_contig1637:2188..22971691683030.904592-UTR-L-elsbetiae_contig1637:2188..2297Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1637 2189..2297 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815675.8997624-CDS-L-elsbetiae_contig1637:2297..25761622815675.8997624-CDS-L-elsbetiae_contig1637:2297..2576Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 2298..2576 +
1691683030.9132602-CDS-L-elsbetiae_contig1637:2297..25761691683030.9132602-CDS-L-elsbetiae_contig1637:2297..2576Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 2298..2576 +
1622815675.913027-CDS-L-elsbetiae_contig1637:2824..29731622815675.913027-CDS-L-elsbetiae_contig1637:2824..2973Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 2825..2973 +
1691683030.9243164-CDS-L-elsbetiae_contig1637:2824..29731691683030.9243164-CDS-L-elsbetiae_contig1637:2824..2973Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 2825..2973 +
1622815675.9258933-CDS-L-elsbetiae_contig1637:4243..44021622815675.9258933-CDS-L-elsbetiae_contig1637:4243..4402Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 4244..4402 +
1691683030.932436-CDS-L-elsbetiae_contig1637:4243..44021691683030.932436-CDS-L-elsbetiae_contig1637:4243..4402Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 4244..4402 +
1622815675.9396584-CDS-L-elsbetiae_contig1637:5032..51341622815675.9396584-CDS-L-elsbetiae_contig1637:5032..5134Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 5033..5134 +
1691683030.941022-CDS-L-elsbetiae_contig1637:5032..51341691683030.941022-CDS-L-elsbetiae_contig1637:5032..5134Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 5033..5134 +
1622815675.9519017-CDS-L-elsbetiae_contig1637:6143..62511622815675.9519017-CDS-L-elsbetiae_contig1637:6143..6251Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 6144..6251 +
1691683030.9517071-CDS-L-elsbetiae_contig1637:6143..62511691683030.9517071-CDS-L-elsbetiae_contig1637:6143..6251Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 6144..6251 +
1622815675.9632654-CDS-L-elsbetiae_contig1637:7112..73561622815675.9632654-CDS-L-elsbetiae_contig1637:7112..7356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 7113..7356 +
1691683030.9688604-CDS-L-elsbetiae_contig1637:7112..73561691683030.9688604-CDS-L-elsbetiae_contig1637:7112..7356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1637 7113..7356 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1637.4331.1

>prot_L-elsbetiae_contig1637.4331.1 ID=prot_L-elsbetiae_contig1637.4331.1|Name=mRNA_L-elsbetiae_contig1637.4331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp
MGRSHVLPQALLLVMPCTLLCACVAAYRMGLSANPTTSRRDCRRRARGGS
DLAGEMLSSSFGEEGEEDEAERVLSLWFDGSTTDNHRTKWFAQGDAIARV
DETIRKDFGDLVLRAEAGALTASWSERPRSLVALILLLDQFSRHMFRGEP
DRDERVGGCDRQALPLAEALLERGWQHGLAAEQHVFALMPLRHTPSEERL
VRVMEEATAREERLVQSQELLKRFKKATNRRLQGIQDRAEEGAEILEHLE
FVPPDPSQMDKHELVKVLRVFLEARGAAEGAGAGAGATTTTTTTTTTSGI
NGNSQTANDASTSASSCASASASNSGINDAHAADTTVAGATTATKSG
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mRNA from alignment at L-elsbetiae_contig1637:1778..7356+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1637.4331.1 ID=mRNA_L-elsbetiae_contig1637.4331.1|Name=mRNA_L-elsbetiae_contig1637.4331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5579bp|location=Sequence derived from alignment at L-elsbetiae_contig1637:1778..7356+ (Laminarionema elsbetiae ELsaHSoW15)
GTTGGTGGCCCACGCTGACCGCCGCCATGACCATCAGTAAATAGGAGTAC
TACGGTTAGTACTCTTGGACTCTTGGTCTTGCTTGGTGCTTTCTCAGACA
ACGTCCCTATATGACTTGCTAGACTGATAGTTGGGCAAAATGAGCGAAGT
CCACTTACTTCTAGAATTTTCGTTCAAGTTTGCAAGAATCGATTTATGTG
TTGCTACAGAGATATCTTACATCAATGGTGTAGTTCGATGCGCGAAGGAG
GGCGTCGTGCGTCGTGTAAAACGTAAATACATAAGGCGCCAACAAATGCG
GGTTGAATATGTTTGGTTTAGCTTTCCCGAATGGCATATATATGACGTAA
GAGAACCTCTCAGGCATAGCTGATAGCTGGTTGTGTATGTTCTGTCCCCA
TCGGCGCGCAGGGAGAGCCAAGAGAGAGCGAGGACTCGCCAGGGATCGCA
AGTTGAAAAACCTCGAGGTTTTTCTGTGCTGTGCTTTGAGGGACGCTGTC
CCCTCGTTTTGTTGGGGCTTATGGGTCGTTCTCATGTGTTGCCGCAGGCT
CTGTTGTTGGTCATGCCGTGCACGTTGTTGTGTGCTTGTGTAGCAGCCTA
CCGCATGGGTTTGTCGGCGAACCCAACCACCAGCCGCAGAGACTGCAGGC
GGCGGGCGAGGGGCGGTTCAGACCTAGCTGGCGAAATGTTGTCGTCGTCT
TTCGGAGAGGAGGGTGAGGAGGATGAGGCTGAGAGAGTGCTGTCTCTGTG
GTTTGATGGATCAACGACAGACAACCATCGCACCAAGTGGTTTGCGCAGG
TGTGTGTTGGAGTGCCCGCCTGTTGTCTCTTTCTCTCTCCCAGCGTGCCC
CAAGCGTTCTTGTGGGCAGGTGTCGGGCATTGGTTCGGCTAGTTGGCATT
GTGCTTCCATATCCGACTCTCTGGTGACATTGAAATGCATGTGTGTTCGT
CTGCGGAGACTCGAACTTCTTGCAGCACACAGCCTACGTAGCGAACCCCA
ACCGACTACTTCGATAACACACGCGCCCTCTCGCGCCGTTCCGAAAGGGA
GACGCCATCGCGCGCGTGGACGAAACCATCCGCAAGGACTTCGGGGATCT
GGTGCTCCGGGCAGAGGCCGGGGCGCTGACGGCCTCGTGGAGCGAACGAC
CGCGGTCGCTAGTGGCGCTCATTCTTCTCCTCGATCAGTTCTCCAGGTAT
TTCTCCACAACCAGGAGGGTACCACTGCCGAAAAGGGTGGTTTTCGAAAC
GTCTCGTCGGGGGCTTTCCAGAGAGGTACCAGTTAGTGTCCGCACTCGCA
CCCCCGTGTCAGCGTTTTTCTATAAGCCTATTTCTCCACAACCTTTTCGG
CAGTGGTACCCTCCTGGTTGTGGAGAAACACGATAGAAAAACGCTAGCAC
GGGGGTGCGATAACCCGCATGATTGCGGTACTCTTGTCTGTTCTGTCTCC
CTGTCTCGCCCTGTCTCTCTCTGTCTCTCTCTCGCTCTGTCTCTCTCGGG
AGTGGGCTGGCTCCAACATGTTGTACCAGGCAGAGCAGCATTTCAGCGCC
TAATTTGCATCATCTTCTGTGGGTGTGCAGTACTCTCAGGAGCCACGGGA
CGTCCTAAGGAGGAAGTTTTGAACAACACATCAAGAGCGTAGACTTTATT
TCCAGCGCTCGAAGCGCTCCTTGCCACGAAGGGGTATCTTGCCTGAGCTC
TGAACCGTGGTTGCACAGAAGGGTTCCTCTCCCTGAGCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCGCCCCGTCCCCTCTTTTTTTTTTTTTTTTTTT
TCAAAGATATTGGGGTTCTTTTTCTTCTTTTTTAAAAACCAACCCNNNNN
NNNNNCGAGGGCCCCCCCCCCGCGGGGGGGGTTTTCGCCCCGCTCCCCCC
CCGGGTTGCCCCAGAGGGGGTCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCATCTGCGGTGCTTGCCTTCAACTTTTTAACTTTTTAAGGCGGGAAGAG
ATTTGGCCGTCTCTTCTCTCAAATGTACACACGAACTAGCGTTTTCCTCT
GACAAGAACGAAAGCGAGAGAAAAAGCTCATTTTTTTGTGAGAATAAAGT
CGCCTTGTAAACGCCGGGGCCTCGAACCCATGACCTGCCGGCCAAAAAGG
TTTGCGGGGATACCGACTAGATCGCCCCGTGCATGCACGAAGAACTGTCT
TATATAACGAAGTGTCTAGATGTCTAGATACACGCTGTAAATATTAAATA
TTTGTTTTTTGGGCTGTTTGTTCATCACGCGGTCTGCAGTCCCTCTGCGC
CCCCGCCCCCAAAAAAACAATTAGCGGCCGAACCTGACTCGCTTCAAAAG
GAAACCTGCTCTGCGTTTTGCCCCTACACACAGGCGCTGCTTGTTTCTTG
CTTGATAGTCGCGCGGTTTCGCCGCCATACAATAATGCCTCCGTTGCTGC
TTTGTGTTTTTTCAAGGCACATGTTCCGCGGAGAGCCGGACAGAGACGAG
CGGGTCGGAGGGTGCGATCGACAGGCGCTGCCTTTGGCGGAGGCGTTGCT
GGAAAGGGGATGGCAGCACGGCCTCGCCGCCGAGCAACACGTGTTCGCTC
TCATGCCGCTCAGGCACACCCCGAGGTACAAGCCAGTCCCTTTCAGTACA
AGTGCTGCGATGTCTCGAACGGCGGGCTTGGGGGGGGGGGAGAGGGGTCC
GTGAACGAGTGCGCCTCGCGCGGGCTGTGTTGGCGTGCGTGCGTGGGTGC
GTGCATGTGTGTTTGTGCGTATGTGCGGCATGTATTGTTTGTTTATCTCG
GGCATATTTATGGACGCGTCTTCTCGTTGCTTCACCGCATGACAATCTCC
TTAAGAATCTAGCCGGAGAAATGGAAGATGCTGCAACTATCTATAGTGAC
TGGCACGACGTGATTTATCGTGTGTGTGTGTGCGTGTGTGTGTGCGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAAGTCGTTTTT
TTCCCTGTCGTTTTCATGTTGAGTTCCCCGCCGCGGCCTGGGGGGAAGCG
GCAGCGGCACGAAAGTGTGGCGGCCGCGAGGGGGCACACAGACAGAGATA
CACACAGAGAGCGGAGCACCCACAGCTAATGTCATGCGGAGGACTTCTCT
TTCGAAACCTTCGACCGCACCACTCCGTCAACCAAGCTAAACGGCCCCCC
TCGACTCTATATTCTTTTTTATCGGGATTTGTGTGTGTGGGGGACGATTT
TTCAGCGAAGAACGGTTGGTCCGCGTGATGGAAGAGGCGACCGCGAGAGA
GGAGCGCCTGGTGCAGTCACAGGAGCTCCTGAAGCGCTTCAAGAAAGCCA
CCAACAGGTGGGCCCCTGGGGTTGGCATGGGATACCCGTTTTCAGTATAC
CTTTGTTAGGGTGAATTATCCTGTGACCACGGGAATCGACCGCGTCAGTG
TTGGATTAGTACGGACTCATGGAGGTGTACTGGATAGAGTGATCGGAACG
GTTTTTAATGTGAAGACAACAACAACAACCCGTGTGTACGGTTGTGCCGT
TTCAGTTTCTGGAGGCACGGGTGCTTACCGTAGGTGACACAAGATACCCC
CCCCTCCCCCCCCCGGACAGATCTTCAAAGCTCGATTCCTCCCCAGCGAG
AAGAGTGCCAGTGCTGAGAAGGAGTGGGGTTGGAAATATCTTGTCGAGGG
CTGTCCGATGATGTGTCGTTTGGTTGCTGGCACCCTCTTCGTTCCGGAGT
AATGGAGCTCTAAAACTCGGTCCATGGGGGGGGTGGTATATTGTGTCACC
TACGGTAGGCGTCGATTGATTGGGCTGTGAGGGAGGTCGAGAGACTGCGA
ACTAGCAGCCCCCCCCCTCCCCCCTCTCTCGATGTCCCATCAAATACTGC
TACGCGCGTCTTTTGAAACAAGCTCTGGAAATCCGCTGGAAGGCGGTACA
TAGCGTGAAGGTACACACGCCGTCCGAAAGCATCTACGTAGAGCGGCCAG
TGCTGCATCAAGGTTCGGTCTCTCAAGGCAGGTTTACTTCTAGGTACGAC
AGGTGTGATGCTCTGGAAAAAAACACCCGTGCTGTTTTTTTCTTGATCTC
CGCGTAGGCGCGTAGGTATGTACACGAACAAACGAACAACCGAGTCGTTG
TTAAGGCGTGGTACGCGGCAGGGTCCAAACAAGGTGTGTGCGCGGGGTGT
GTGTGTGTGGAGCCCGCACGCTCTGGCATTTTCGACGGGGCTTCCGTTGC
TGCTGCTGCTGCTGCTAGCTGCTGCTGCTGCTATTGAAGTCTATCAACCG
TCGCCACTGCAAATAATGCCCTACCTGCTGGTCCTCCTGAAAACCGGCCG
CTTTGCCATTTACTAGGCGGCTCCAGGGCATCCAGGACAGGGCGGAGGAA
GGAGCAGAGATCTTGGAGCACCTAGAGTTCGTGCCCCCGGACCCTTCCCA
GATGGATAAACACGAGCTTGTCAAGTAAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAAAACAAGAGAGAGAGAGAGAGAGCAGGCGCGC
GGGATACGGAGTGTTTGCTACATATTTAGCGGCCTTGTTGTCAACCGTAC
TTTCCTCTCTGCTTCACGCGACTCCGCTGCAGCCTTCGCGTTGGTTGTTG
AGTGTTCTTCTTCGCGACTTGGGGGGTGAGTGCAAGCGGTGGTGGGTACC
TCGGCTTTACTGGCCTGAGTTTTCCACTCGGCGTTTGGCCTTTTTTCTCC
CACAGGCCTTGCTGTTTGGTTCTCGCTGCACGACAATGGCCACCGAAAAT
AGTGCCCGTGCTTTCCTTAACCGGGAGCAGAAGTTCCAGCCTCTAAGTGT
GCGGGCCCGGGCTTGTGTAATCGAGGAACACTGATGAAGCGACTTTCCCT
CGACAACCGGGAGGCTGAATAGCAGCACTAGATAGTGTCCGTGCGCGTAC
CAGCTGTTTATCTTGTACCAGGTTTACCATGTACAAGTGCTAGACTACAC
AGCTAGTCCTTGTGCAAGAGTTGGTGTTCCGGGCGACCTCAAAGAGATCG
GTTGATAGATTAGGTCACAACGAGAGATAGCTTTGCTACCTACCCTTCGG
CTTTCCTTGGAGTCACGAGGCCCGTTTCTCCGTGTCTTTCCACAACGACG
CTACTCGGTTCTTCTGCCTTCAGGGTGGGCAGAGTGTGTCAACGGAGGTG
TGGTTGCTCTCTCGCAGAGGAGCTTGTTGTGTTGAGATATTGTTTCCTGT
TCAGCGACCACGCCTGCCCGCCCGCCTGCCTGCCTGCCCGCCCGCCCGCC
TTCCTGTCGGCCTGCCTGTCTGCCCCTTGGGGAAGGGTCTTGCGAGTCTT
CTTGGAGGCACGAGGCGCCGCCGAAGGCGCCGGTGCCGGCGCCGGCGCCA
CCACCACCACCACCACCACCACCACCACCAGTGGCATCAACGGCAACAGC
CAAACCGCGAACGACGCCAGCACCAGCGCGAGCTCCTGCGCCAGCGCCAG
CGCAAGCAATAGCGGCATCAACGACGCGCACGCAGCAGACACCACCGTTG
CCGGCGCCACGACCGCTACCAAGAGCGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1637:1778..7356+

>mRNA_L-elsbetiae_contig1637.4331.1 ID=mRNA_L-elsbetiae_contig1637.4331.1|Name=mRNA_L-elsbetiae_contig1637.4331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2082bp|location=Sequence derived from alignment at L-elsbetiae_contig1637:1778..7356+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTCGTTCTCATGTGTTGCCGCAGGCTCTGTTGTTGGTCATGCCGTG
CACGTTGTTGTGTGCTTGTGTAGCAGCCTACCGCATGGGTTTGTCGGCGA
ACCCAACCACCAGCCGCAGAGACTGCAGGCGGCGGGCGAGGGGCGGTTCA
GACCTAGCTGGCGAAATGTTGTCGTCGTCTTTCGGAGAGGAGGGTGAGGA
GGATGAGGCTGAGAGAGTGCTGTCTCTGTGGTTTGATGGATCAACGACAG
ACAACCATCGCACCAAGTGGTTTGCGCAGATGGGTCGTTCTCATGTGTTG
CCGCAGGCTCTGTTGTTGGTCATGCCGTGCACGTTGTTGTGTGCTTGTGT
AGCAGCCTACCGCATGGGTTTGTCGGCGAACCCAACCACCAGCCGCAGAG
ACTGCAGGCGGCGGGCGAGGGGCGGTTCAGACCTAGCTGGCGAAATGTTG
TCGTCGTCTTTCGGAGAGGAGGGTGAGGAGGATGAGGCTGAGAGAGTGCT
GTCTCTGTGGTTTGATGGATCAACGACAGACAACCATCGCACCAAGTGGT
TTGCGCAGGGAGACGCCATCGCGCGCGTGGACGAAACCATCCGCAAGGAC
TTCGGGGATCTGGTGCTCCGGGCAGAGGCCGGGGCGCTGACGGCCTCGTG
GAGCGAACGACCGCGGTCGCTAGTGGCGCTCATTCTTCTCCTCGATCAGT
TCTCCAGGGAGACGCCATCGCGCGCGTGGACGAAACCATCCGCAAGGACT
TCGGGGATCTGGTGCTCCGGGCAGAGGCCGGGGCGCTGACGGCCTCGTGG
AGCGAACGACCGCGGTCGCTAGTGGCGCTCATTCTTCTCCTCGATCAGTT
CTCCAGGCACATGTTCCGCGGAGAGCCGGACAGAGACGAGCGGGTCGGAG
GGTGCGATCGACAGGCGCTGCCTTTGGCGGAGGCGTTGCTGGAAAGGGGA
TGGCAGCACGGCCTCGCCGCCGAGCAACACGTGTTCGCTCTCATGCCGCT
CAGGCACACCCCGAGGCACATGTTCCGCGGAGAGCCGGACAGAGACGAGC
GGGTCGGAGGGTGCGATCGACAGGCGCTGCCTTTGGCGGAGGCGTTGCTG
GAAAGGGGATGGCAGCACGGCCTCGCCGCCGAGCAACACGTGTTCGCTCT
CATGCCGCTCAGGCACACCCCGAGCGAAGAACGGTTGGTCCGCGTGATGG
AAGAGGCGACCGCGAGAGAGGAGCGCCTGGTGCAGTCACAGGAGCTCCTG
AAGCGCTTCAAGAAAGCCACCAACAGCGAAGAACGGTTGGTCCGCGTGAT
GGAAGAGGCGACCGCGAGAGAGGAGCGCCTGGTGCAGTCACAGGAGCTCC
TGAAGCGCTTCAAGAAAGCCACCAACAGGCGGCTCCAGGGCATCCAGGAC
AGGGCGGAGGAAGGAGCAGAGATCTTGGAGCACCTAGAGTTCGTGCCCCC
GGACCCTTCCCAGATGGATAAACACGAGCTTGTCAAGCGGCTCCAGGGCA
TCCAGGACAGGGCGGAGGAAGGAGCAGAGATCTTGGAGCACCTAGAGTTC
GTGCCCCCGGACCCTTCCCAGATGGATAAACACGAGCTTGTCAAGGTCTT
GCGAGTCTTCTTGGAGGCACGAGGCGCCGCCGAAGGCGCCGGTGCCGGCG
CCGGCGCCACCACCACCACCACCACCACCACCACCACCAGTGGCATCAAC
GGCAACAGCCAAACCGCGAACGACGCCAGCACCAGCGCGAGCTCCTGCGC
CAGCGCCAGCGCAAGCAATAGCGGCATCAACGACGCGCACGCAGCAGACA
CCACCGTTGCCGGCGCCACGACCGCTACCAAGAGCGGCGGTCTTGCGAGT
CTTCTTGGAGGCACGAGGCGCCGCCGAAGGCGCCGGTGCCGGCGCCGGCG
CCACCACCACCACCACCACCACCACCACCACCAGTGGCATCAACGGCAAC
AGCCAAACCGCGAACGACGCCAGCACCAGCGCGAGCTCCTGCGCCAGCGC
CAGCGCAAGCAATAGCGGCATCAACGACGCGCACGCAGCAGACACCACCG
TTGCCGGCGCCACGACCGCTACCAAGAGCGGC
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