mRNA_L-elsbetiae_contig1635.4321.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1635.4321.1
Unique NamemRNA_L-elsbetiae_contig1635.4321.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: D7FQ63_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ63_ECTSI)

HSP 1 Score: 447 bits (1149), Expect = 1.950e-151
Identity = 296/455 (65.05%), Postives = 318/455 (69.89%), Query Frame = 1
Query:    1 FKAACRGTRGREEIALYREQQAAASKIQARIRGDRARKDFSRAAPGGVPLDRADIKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSRLXXXXXXXXXXXXXXSVLDYELFEGEDFSWRASQEWLHDWRSDVVRSASMLHRVNISYNSIGCLRDMSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVELHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPGAEFTNTLPPFCEPEGPPVPESDQGVGPETVNSSSIGSAGVSDTPEE---TFRRST---------GVVTREATPCVEEVLATTSFDASS 1329
             +AACRGTRGREE ALYR                  RKDF+R +PGG+PLDRADIKKGLHTLGRNP DLRLCYIGLMAANAGVSNIN+I +FPLLQTVDLSGNCISSTKPL                                                              I  LRD+SHHRN     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GLPLVELHLDHNYIEKAENVGS KLA+LR+LRLGFN IGNLSNLK C+SL TLDVRFNK+SAVRQVEYLQECQFLHT+VLEGNPMDRLE+YRARVIFRLQ LM+LDRNKISPEEKVKAVNLMGDEES+LPHRKQVFHK+LPGAEFTNTLPPF EPEGPP PE D    PETV+ S        D+PEE    F  ST          VV+REA  CVE V+  +S+  SS
Sbjct:   50 IQAACRGTRGREETALYRXXXXXXXXXXXXXXXXXXRKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIAEFPLLQTVDLSGNCISSTKPLX--------------------------------------------XXXXXXXXXXXXXXXXXIDSLRDLSHHRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGSGKLASLRILRLGFNDIGNLSNLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEAYRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDEESDLPHRKQVFHKHLPGAEFTNTLPPFREPEGPPAPEPDPAEKPETVSGS--------DSPEEGGFVFEDSTVSIVDPPAPTVVSREAISCVEHVMTASSYGFSS 452          
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A6H5KB11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB11_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 2.690e-60
Identity = 103/113 (91.15%), Postives = 110/113 (97.35%), Query Frame = 1
Query:    1 FKAACRGTRGREEIALYREQQAAASKIQARIRGDRARKDFSRAAPGGVPLDRADIKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSR 339
            F+AACRGTRGREE ALYREQQAAASKIQARIRGD+ARKDF+R +PGG+PLDRADIKKGLHTLGRNP DLRLCYIGLMAANAGVSNIN+IV+FPLLQTVDLSGNCISSTKPLSR
Sbjct:   56 FQAACRGTRGREETALYREQQAAASKIQARIRGDKARKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSR 168          
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A835YJY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY7_9STRA)

HSP 1 Score: 202 bits (515), Expect = 7.560e-56
Identity = 176/406 (43.35%), Postives = 227/406 (55.91%), Query Frame = 1
Query:   25 RGREEIALYREQQAAASKIQARIRGDRARKDFSRAAPGGVPLDRADIKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSRLXXXXXXXXXXXXXXSVLDYELFEGED------------------FSWRASQEW--LHDWRSDVVRSASMLHRVNISYNSIGCLRDMSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVELHLDHNYIEKAENVGSDKLAN-------LRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPG--AEFTNTLPPFCEPEGPPV 1155
            R R  I L  EQ  AA+ IQ+R+R   A+K  +  A GG  LDRA +K+GLHTLGR P  LR C  G      G+ ++ A+ D+PLLQT+D+S N ++   PL  L               VLD+E+  G D                   +  A   W  L DWRS  VR+ S L   ++S N+I  +RD+S HRNL  L   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+GLPLVEL L            + +  N       LR L L  N I  LS L+ C SL TLD+  N +SA+RQVE+L++C  L  + L        E YR RV+ RLQ L +LD   +SP+EKV+A+NL G E S+L +R+ +F        A++ + LPP+ EPE  P+
Sbjct:   99 RKRRRIPLKEEQGGAATLIQSRVRTRLAQKRVAALADGGTTLDRAAVKRGLHTLGRAPHSLRHCLTGCDLRGLGLRDVAALSDWPLLQTLDVSDNALTELAPLCALPFLCELHAARNGVTEVLDFEVLRGRDQTIALNAYPHVLCAANGTHARSADMPWEDLLDWRSSAVRAESALALADLSENAIAAMRDLSPHRNLHTLLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLPLVELDLXXXXXXXXXXXAAPESGNGCAPPLLLRRLNLADNFIIELSGLQRCASLVTLDLSGNALSALRQVEWLRDCAVLRELSLARTAAAEQEWYRLRVLLRLQGLTLLDSEPVSPQEKVEALNLAGGEGSDLANRQALFRGTFQEHEAQWCDLLPPYQEPEPAPM 504          
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A8J2T0T5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0T5_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.800e-24
Identity = 120/428 (28.04%), Postives = 172/428 (40.19%), Query Frame = 1
Query:   16 RGTRGREEIALYREQQAAASKIQARIRGDRARKDFSRAAPGGVPLDRADIKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSRLXXXXXXXXXXXXXXSVLDYEL---FEGEDFSWRASQEWLHDWRSDVVRSASMLHRVNISYNSIGCLRDMSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVELHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDV---------------------------------------------RFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPGA-EFTNTLPPFCEPEGPP 1152
            RG     E+   REQ  AA+ I    RG   R+  +R   G   L+R DI +GLHTLGR   DL+  Y+G   +   + +I+ +  +  LQ +D+S N ++S  PL  L              S  D E+     GE             W      + S L  V++S N I  L + S HR L+                                     DG  + E+             G   L+ L++L +  N +  +S      +L  LDV                                             R N I  VR+VE+L+      +++L+GNP   L  YR RV+FRLQ+L VLD   +S ++K+KAVNL G +ES+L HR++ F K+   A EF + LPPF EPE  P
Sbjct:   51 RGRIACREVDERREQTQAATSIGRIYRGKVTRR--ARVDRGPRSLERDDIAQGLHTLGRTA-DLKHAYLGCSVSGLQLVDIDVLQSYEHLQALDVSCNNLTSLSPLEHLPYLTRLNASGNKL-SQFDLEIPRNVPGEKA-----------WTLGRKHAGSNLIEVDLSDNDIEVLGEQSTHRRLEKF---------------------------------VLDGNRMYEI------------TGLQNLSRLKILSMRNNDLSYVSXXXXXSALVELDVGGNRLTTMGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDNCIEKVREVEFLERLPLFSSLLLQGNPCSDLPFYRRRVVFRLQQLRVLDGIAVSSDDKIKAVNLHGGDESDLKHRRETFRKHFGSALEFEDPLPPFVEPEKSP 418          
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A3F2RVW1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVW1_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 5.610e-18
Identity = 91/348 (26.15%), Postives = 152/348 (43.68%), Query Frame = 1
Query:  163 IKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSRLXXXXXXXXXXXXXXSVLDYELFE-GEDFSWRASQEWLHDWRSDVVRSASM-------------------LHRVNISYNSIGCLRDMSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVE-LHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLES----YRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPGAEFTNTLPPF 1131
            + K L  LGRNP      Y      +  +S+I  I +FP +Q +  + N + +  PL  +               VLD+++ +   D +W     W+      ++R A++                   L  +++++N+I  +  +S  R L+ LD                                   GL  +E L L HN +   ++ G   L  L  L +  N +  LS+L +CV L  L++ +N+++ + ++  L   ++L  + L G P+  ++     YRARVI RL +L  LD   ++ +EKVKA+ + G   S+L  R+QV  KYLPG EF N LPP 
Sbjct:    2 VSKRLGVLGRNPFTQAHIYTTATLTDLRLSDIEVIREFPHIQHLVCNQNELKTLDPLKHIPLLLTLDAEENQLTEVLDFQVPKCTPDNAWVDGARWI----GSLLRKATLNRNRIVSMPTHELSTTHPFLQELHLAFNTIEEISGVSQLRFLRVLDLSHNRLSSIRGLVANEDSSH---------------GLQALETLLLSHNQLTAIDD-GVAFLPRLTHLDVAHNQLKTLSSLGECVQLQRLELAYNRVADINELNCLANLRYLGQLSLGGCPLVEIQVSLIFYRARVIRRLLQLQKLDDETVTSKEKVKALVMHG---SDLDARRQVAAKYLPGQEFANFLPPL 326          
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A3R7K2Y1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K2Y1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.940e-16
Identity = 89/345 (25.80%), Postives = 150/345 (43.48%), Query Frame = 1
Query:  163 IKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSRLXXXXXXXXXXXXXXSVLDYELFE-GEDFSWRASQEWLHDWRSDVVRSASM-------------------LHRVNISYNSIGCLRDMSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVE-LHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLES----YRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPGAEFTNTL 1122
            + K L  LGRNP      Y      +  +S+I  I +FP +Q +  + N + +  PL  +               VLD+++ +   D +W     W+      ++R A++                   L  +++++N+I  +  +S  R L+ LD                                   GL  +E L L HN +   ++ G   L  L  L +  N +  LS+L +CV L  L++ +N+++ + ++  L   ++L  + L G P+  ++     YRARVI RL +L  LD   ++ +EKVKA+ + G   S+L  R+QV  KYLPG EF N L
Sbjct:    2 VSKRLGVLGRNPFTQAHIYTTATLTDLRLSDIEVIREFPHIQHLVCNQNELKTLDPLKHIPLLLTLDAEENQLTEVLDFQVPKCTPDNAWVDGARWI----GSLLRKATLNRNRIVSMPTHELSTTHPFLQELHLAFNTIEEISGVSQLRFLRVLDLSHNRLSSIRGLVANEDSSR---------------GLQALETLLLSHNQLTVIDD-GVAFLPRLTHLDVAHNQLKTLSSLGECVQLQRLELAYNRVADINELNCLANLRYLGQLSLGGCPLVEIQVSLIFYRARVIRRLLQLQKLDDEIVTSKEKVKALVMHG---SDLDARRQVAAKYLPGQEFANFL 323          
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A7S2BD69_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BD69_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.970e-14
Identity = 60/166 (36.14%), Postives = 81/166 (48.80%), Query Frame = 1
Query:  673 DGLPLVELHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRL---------ESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPGAEFTNTLPPFCEPE 1143
            DGLPL EL LD+N I+  EN+  +K+  L                                 AVR+VEY+Q    L ++VL GNP+  +           YR RV+ RLQ L  LD    + EEK KA+NL G + S++ +R +VF K  P  E++NTLP F E E
Sbjct:    9 DGLPLTELALDNNKIKFIENL--EKVPCLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVREVEYVQNLPLLCSLVLTGNPVAPVVIPEDPSLPNFYRLRVLVRLQGLTSLDGKLATAEEKTKAMNLHGGDNSDVLNRARVFKKVFPDMEYSNTLPCFVETE 172          
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: Q1L8G4_DANRE (Leucine-rich repeats and guanylate kinase domain-containing n=4 Tax=Danio rerio TaxID=7955 RepID=Q1L8G4_DANRE)

HSP 1 Score: 68.6 bits (166), Expect = 1.250e-8
Identity = 54/160 (33.75%), Postives = 77/160 (48.12%), Query Frame = 1
Query:  673 DGLPLVELHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYL----PGAEFTNTLPPFCEP 1140
            D LPL EL L  N I K EN+ +  L NL+VL L  N I           L T+++  N I+ +++  +L +   L  + L  NP+   + YR  VIF LQ L++LD+  ++ EEKV AVN        +  R  + H       P   F +TLP    P
Sbjct:  157 DHLPLRELCLAGNMINKIENLQT--LHNLQVLDLSCNRIQXXXXXXXLRFLGTVNLESNLITEIKEAAHLHDLILLREINLLKNPVQDHDDYRIAVIFLLQHLILLDKQTVTAEEKVAAVNKYDPPLEVVAARDHMTHLVYQLMQPQVIFDSTLPSLDAP 314          
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A4V1IT65_9FUNG (Outer arm dynein light chain 1 (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4V1IT65_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 2.290e-7
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 1
Query:  700 LDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKA 1029
            L +N I + ENVG  KL  LR L+L  N I ++ NL+   +L  LD+  N +     +E L++   L  + L GNP+++L+ YRA  I  L +L VLD  +I+  E+++A
Sbjct:   52 LQNNQIGRIENVG--KLKGLRYLQLALNNIRHIENLQHNEALEKLDLTVNFVENPLDLENLKDNYRLRELYLVGNPVNKLDGYRAFAIHTLPQLRVLDGVEITRTERLEA 159          
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: UPI0013903C59 (leucine-rich repeat and guanylate kinase domain-containing protein-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013903C59)

HSP 1 Score: 63.9 bits (154), Expect = 3.780e-7
Identity = 34/113 (30.09%), Postives = 61/113 (53.98%), Query Frame = 1
Query:  748 LANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFH 1086
            L  L+ L L  N I ++  L+    L  +D++ N+I  + +V Y++E +         NP+  L  YR  ++FR+Q L+ LD++K++PEEK+ A+N+       +  R  + H
Sbjct:  252 LKTLQKLNLASNCIRSMKGLQGHPMLQEVDLQENQIIDIAEVRYIRELKXXXXXXXXSNPIQSLPDYRLSLLFRIQTLLELDKSKVTPEEKIAAMNMYSPPMEVVAARDHMLH 364          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FQ63_ECTSI1.950e-15165.05Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KB11_9PHAE2.690e-6091.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJY7_9STRA7.560e-5643.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2T0T5_9STRA1.800e-2428.04Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A3F2RVW1_9STRA5.610e-1826.15Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A3R7K2Y1_9STRA3.940e-1625.80Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A7S2BD69_9STRA1.970e-1436.14Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
Q1L8G4_DANRE1.250e-833.75Leucine-rich repeats and guanylate kinase domain-c... [more]
A0A4V1IT65_9FUNG2.290e-737.27Outer arm dynein light chain 1 (Fragment) n=1 Tax=... [more]
UPI0013903C593.780e-730.09leucine-rich repeat and guanylate kinase domain-co... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1635contigL-elsbetiae_contig1635:974..4936 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.9
Seed ortholog evalue4.3e-125
Seed eggNOG ortholog2880.D7FQ63
Hectar predicted targeting categoryother localisation
EggNOG free text desc.axoneme assembly
EggNOG OGsCOG4886@1,KOG0531@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1347
Cds size1347
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815674.9339778-CDS-L-elsbetiae_contig1635:973..13591622815674.9339778-CDS-L-elsbetiae_contig1635:973..1359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 974..1359 +
1691683030.2933385-CDS-L-elsbetiae_contig1635:973..13591691683030.2933385-CDS-L-elsbetiae_contig1635:973..1359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 974..1359 +
1622815674.9466164-CDS-L-elsbetiae_contig1635:1769..19011622815674.9466164-CDS-L-elsbetiae_contig1635:1769..1901Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 1770..1901 +
1691683030.3061173-CDS-L-elsbetiae_contig1635:1769..19011691683030.3061173-CDS-L-elsbetiae_contig1635:1769..1901Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 1770..1901 +
1622815674.9606209-CDS-L-elsbetiae_contig1635:2451..26091622815674.9606209-CDS-L-elsbetiae_contig1635:2451..2609Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 2452..2609 +
1691683030.3143058-CDS-L-elsbetiae_contig1635:2451..26091691683030.3143058-CDS-L-elsbetiae_contig1635:2451..2609Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 2452..2609 +
1622815674.973098-CDS-L-elsbetiae_contig1635:3092..32671622815674.973098-CDS-L-elsbetiae_contig1635:3092..3267Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 3093..3267 +
1691683030.3224604-CDS-L-elsbetiae_contig1635:3092..32671691683030.3224604-CDS-L-elsbetiae_contig1635:3092..3267Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 3093..3267 +
1622815674.9877264-CDS-L-elsbetiae_contig1635:3777..39281622815674.9877264-CDS-L-elsbetiae_contig1635:3777..3928Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 3778..3928 +
1691683030.33097-CDS-L-elsbetiae_contig1635:3777..39281691683030.33097-CDS-L-elsbetiae_contig1635:3777..3928Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 3778..3928 +
1622815674.9994328-CDS-L-elsbetiae_contig1635:4352..44271622815674.9994328-CDS-L-elsbetiae_contig1635:4352..4427Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 4353..4427 +
1691683030.3426554-CDS-L-elsbetiae_contig1635:4352..44271691683030.3426554-CDS-L-elsbetiae_contig1635:4352..4427Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 4353..4427 +
1622815675.0096135-CDS-L-elsbetiae_contig1635:4666..49361622815675.0096135-CDS-L-elsbetiae_contig1635:4666..4936Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 4667..4936 +
1691683030.351496-CDS-L-elsbetiae_contig1635:4666..49361691683030.351496-CDS-L-elsbetiae_contig1635:4666..4936Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1635 4667..4936 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1635.4321.1prot_L-elsbetiae_contig1635.4321.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1635 974..4936 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1635.4321.1

>prot_L-elsbetiae_contig1635.4321.1 ID=prot_L-elsbetiae_contig1635.4321.1|Name=mRNA_L-elsbetiae_contig1635.4321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=449bp
FKAACRGTRGREEIALYREQQAAASKIQARIRGDRARKDFSRAAPGGVPL
DRADIKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDL
SGNCISSTKPLSRLPFLHDLDISHNCLTSVLDYELFEGEDFSWRASQEWL
HDWRSDVVRSASMLHRVNISYNSIGCLRDMSHHRNLQDLDLSHNAVEVLE
GLSALKCLRSLKMNNNHIRRIEGLDGLPLVELHLDHNYIEKAENVGSDKL
ANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFL
HTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDE
ESELPHRKQVFHKYLPGAEFTNTLPPFCEPEGPPVPESDQGVGPETVNSS
SIGSAGVSDTPEETFRRSTGVVTREATPCVEEVLATTSFDASSGEVLQ*
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mRNA from alignment at L-elsbetiae_contig1635:974..4936+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1635.4321.1 ID=mRNA_L-elsbetiae_contig1635.4321.1|Name=mRNA_L-elsbetiae_contig1635.4321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3963bp|location=Sequence derived from alignment at L-elsbetiae_contig1635:974..4936+ (Laminarionema elsbetiae ELsaHSoW15)
TTCAAGGCCGCATGTCGAGGTACAAGAGGCCGCGAAGAAATAGCGCTTTA CCGAGAGCAACAGGCTGCGGCGTCTAAGATACAGGCAAGGATACGCGGAG ATAGAGCGCGCAAGGACTTCAGCCGAGCGGCACCGGGAGGTGTCCCGCTT GACCGAGCAGACATCAAGAAGGGCCTCCACACCCTTGGCCGTAACCCGCA AGATTTACGCCTTTGCTACATTGGACTGATGGCTGCAAACGCTGGGGTTT CTAACATCAACGCGATCGTCGACTTTCCTCTACTTCAAACAGTGGATCTC AGTGGTAACTGCATATCCAGCACGAAGCCTTTGTCGAGGCTGCCCTTCTT GCATGACCTCGACATATCTCACAACTGTCTGACAAGGTAACTCAATATGC GTGAAAGTCGCTCAACACTTGAGAAGTTGCACAAGCAGTTTTCACAGTGA TTACACAGTACAAGTGTCAAGCGGCGAAACTACATACTCCACTTCTAAGT ACAACCTTTCCAAGTGTTCCGCACCGGGTTTTGTACTGGGTTTCGGAGGA GTCAGTGTTGGTACTGTAGGTATGTATGTGAATCAGAAAGCCCAGTGAAA CTAAGGGGGCCTTCGGTAGAAAACATATCCACACGTCATCAGACATGCAT AGTGAGGGCATAAAGTACTTTGTATTGCCCGCGGGGAAGTTCACAAGGCC ACCATGTCTCGACGCACGGCGGGGCCAACGTCAATCGACTCACCGACACG CACGCGAAACACAATCGATATGCCCTGTCGTGATCCCTCTTCACAGTGTA CTGGATTATGAGTTGTTTGAAGGGGAAGATTTTTCGTGGCGGGCGAGCCA GGAATGGTTACACGACTGGAGATCGGACGTTGTGCGATCGGCGTCGATGC TTCACCGGGTGAATATTTCATACAACAGGTGAAGCTTCAGATCACGAGAG ACGTTGAACCCCATTCAGTGATTTTAACTGCCCTACCCGTACCACCTACC GAGGGTTGCGCCAAAGAAAACGTCTGCCCTGTACCTGGTGTGGGCATACA ATCAACTTATTTGTTGAAGAAGGTTTGCGCCATCGTTCGCCTATTGATAA CTTTATCGATAGTGGTGGTGGGTGGAAGCAGGTTCTTGGTGTAGCTAGAT TCGACTCGCGTGGCAAAATAAGTAATGTTACCCATCGACACCTGCATCTG CGAAGCGGTAACGTTGTTAGCATGGGAACCCTGGTCAATGATACCTCGAT CTTCTGAGTTTACATCCATTAAGGAGGTTAAACCATCCGAGCGGCTTCGT TGGAGACTACTGCGACGTACATTCATTCGCCATCAGAAAAACAAAATGGC ATCCTCTACGCTGGGCCAGGCATTTCCGTGCGGTGGTGGACGCTCGTGTC GTCATCTGACAGCATATTTTCGAACCGCCTGTTTTCCCCGCATCTCTGGT GTCTGATATGTTCCGTTTTTCTTCGCAGTATCGGCTGCCTAAGAGATATG TCGCACCACCGAAACCTTCAAGACCTTGACCTCAGCCACAACGCGGTGGA GGTGCTGGAGGGACTGTCAGCTCTCAAGTGCCTGAGGAGCTTGAAGATGA ACAACAACCATATAAGGCGAATCGAAGGGCTCGACGGTAAGTGTGGGAGA GCTGGAAACACAACCGAAGCCTGATATGTTGTTCCCGAGAGGAATCGCCC ACACCTTGCCGGTATTCTGTTACTTCCCGGCGCGCTCGATACGCAGATAT AGCGAGATCATGGCAAAGTCGACGAAAAACAAACTGCGGCACGAGTGCAG TCAGTTGAAGCGCCTCAATGTGTGATGATATCAACCGATCTCTAGTAGTA TCAACATCTACACGCGCTGTTGTCTCCTCCGCACTCGCTCCAAAACCTTC TGAAGTGAGGGGTTGCCTGCGAATCTTCGAGGACCCGTCAATAACCTACT CAATACTTCTAGGAGACTGTAGACGCGGTGGGAAGAGCAGATATATCGCT CACTTTCTTTCCACAACCTCGCATCCAACCAGCACGATGAATAAAGTTTC AGGCCGACCATATACCCTTTGCCTTACTACTCCACGCGTCCCCATTCTTA CGCGCACGCCCCCGGGAAGGGTTGCCTCTGGTGGAGCTGCACCTCGACCA CAACTACATAGAGAAGGCGGAGAATGTTGGTTCCGACAAGCTGGCGAACC TCCGCGTCCTTCGACTTGGCTTTAACGCCATCGGAAACCTCTCCAACCTC AAGGACTGCGTATCGCTAGCTACTCTCGACGTTCGGTTCAACAAGTGAGC ACAAATATCGACCTATTCAACAGGCACGTAAGGCTTTCCATTCCCATTCT AGCTCATGGCACACGCTTCTCCTTCGCCATTTCTCGTGGGCCCTGTTGCT GTTTTCAGCATTTTCGAGGGTATACGTCGAGACTCTCTGGTCCGGGGAGA TATTGTCACCCCTCACAAGGGTATTATTTCGTTCTTGCAGCCTTGGGGAC GATTTTCTGTGTATCTACTTCTACTCTAGTATATATTCAGCGGGTAGAAA ACCGCCCGAAAGCTGGAGTACGGCAACAAAGTATGACGGCCGTATTTTTT AACAGAATGGAAACCGAAAAGAAGTGGGGAAAGAAAGGGCACGCATGAAG CCGTCTTGAAGCCATTCAACGCTGTTTCTACAACGATCCGTGGGCGATGC GGCGTCCAAACAATCCGCAACGTGCGTGTAGACGGGGGAATGAGTTTGAT TCCTTTTTTTCCCTCCGGCTGATGATGCTTGTCCGCTCGATCGCCTGCCG GAAGGATTTCGGCTGTGCGCCAGGTAGAATACCTGCAGGAGTGCCAGTTT CTGCACACGGTCGTCTTGGAAGGGAACCCGATGGACCGGCTGGAGTCCTA TCGCGCGCGGGTCATATTTCGGCTGCAGAGGCTGATGGTTCTCGACAGGA ACAAGGTGAAAGCGAACGAAAGCATGTGTTACATGCAGCTGTTGGAGCTC TTTCCTCAGCCTCTTGATGGGTCGAAGTACTCGACCTCACGCTTATTGCC TGACATTGTGTGCCGCGAATGTAGACACGGATGCGGTCATGTTTGAACGC TACCCCCTGGCACGCTCGTTGCTTCGGGGTGGTGGTACGTTCACAGCGAC CTACGTAGCCTACCCACGCGACCGTCGTGTACACGATGCTTGAAATGCAA CAACCGAAGGGAAAGGACGCAATCAGCAGGAAGCCTGAACTACCAAAACA ACCGTAATGTATCTAGGCGATGCTTGAAATGCAACAGCGGAAGGAAAAGG GAGCCATCAGCAGGAAACCTGAACTTTTGTCGCCGCTGCATTTACCCCCG AATCTATTTTCTGACCCATTACCCTTCAGATCTCCCCTGAGGAGAAGGTG AAGGCTGTGAATCTTATGGGGGACGAAGAAAGCGAACTTCCTCACCGAAA GCAGGTGCGCAGCAAGCCTACCCGAAGCCACTCAAGCACAGTCTAGTAAC TTGTACGCGAAAGTTCGTCCGGCTCTCGCTACGTCGAAAGTTGTTCGGTG TTGCCGTAAACCTCGCAGGCCATCCTGCCCCCGTCTCACACGTGGCCGTC CACTCGCCGCGAAAGCCCTCAAGATTGGGCAGAGGACCGAACGCAAGCAT CCCCTCTCCTTCCACCGGCCACCAAATAACATCCTCGATCCAGGTTTTCC ACAAGTATCTACCTGGAGCAGAGTTCACCAACACCCTGCCCCCGTTCTGC GAGCCCGAAGGGCCTCCGGTGCCGGAATCGGACCAAGGGGTGGGGCCCGA AACGGTGAATAGCAGCAGCATTGGCTCGGCGGGCGTAAGCGACACCCCAG AGGAAACCTTCCGACGTAGTACTGGGGTCGTCACCCGTGAAGCAACGCCC TGCGTCGAGGAGGTACTCGCGACGACCTCTTTCGACGCGTCGTCGGGCGA AGTGTTGCAGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1635:974..4936+

>mRNA_L-elsbetiae_contig1635.4321.1 ID=mRNA_L-elsbetiae_contig1635.4321.1|Name=mRNA_L-elsbetiae_contig1635.4321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2694bp|location=Sequence derived from alignment at L-elsbetiae_contig1635:974..4936+ (Laminarionema elsbetiae ELsaHSoW15)
TTCAAGGCCGCATGTCGAGGTACAAGAGGCCGCGAAGAAATAGCGCTTTA
CCGAGAGCAACAGGCTGCGGCGTCTAAGATACAGGCAAGGATACGCGGAG
ATAGAGCGCGCAAGGACTTCAGCCGAGCGGCACCGGGAGGTGTCCCGCTT
GACCGAGCAGACATCAAGAAGGGCCTCCACACCCTTGGCCGTAACCCGCA
AGATTTACGCCTTTGCTACATTGGACTGATGGCTGCAAACGCTGGGGTTT
CTAACATCAACGCGATCGTCGACTTTCCTCTACTTCAAACAGTGGATCTC
AGTGGTAACTGCATATCCAGCACGAAGCCTTTGTCGAGGCTGCCCTTCTT
GCATGACCTCGACATATCTCACAACTGTCTGACAAGTTCAAGGCCGCATG
TCGAGGTACAAGAGGCCGCGAAGAAATAGCGCTTTACCGAGAGCAACAGG
CTGCGGCGTCTAAGATACAGGCAAGGATACGCGGAGATAGAGCGCGCAAG
GACTTCAGCCGAGCGGCACCGGGAGGTGTCCCGCTTGACCGAGCAGACAT
CAAGAAGGGCCTCCACACCCTTGGCCGTAACCCGCAAGATTTACGCCTTT
GCTACATTGGACTGATGGCTGCAAACGCTGGGGTTTCTAACATCAACGCG
ATCGTCGACTTTCCTCTACTTCAAACAGTGGATCTCAGTGGTAACTGCAT
ATCCAGCACGAAGCCTTTGTCGAGGCTGCCCTTCTTGCATGACCTCGACA
TATCTCACAACTGTCTGACAAGTGTACTGGATTATGAGTTGTTTGAAGGG
GAAGATTTTTCGTGGCGGGCGAGCCAGGAATGGTTACACGACTGGAGATC
GGACGTTGTGCGATCGGCGTCGATGCTTCACCGGGTGAATATTTCATACA
ACAGTGTACTGGATTATGAGTTGTTTGAAGGGGAAGATTTTTCGTGGCGG
GCGAGCCAGGAATGGTTACACGACTGGAGATCGGACGTTGTGCGATCGGC
GTCGATGCTTCACCGGGTGAATATTTCATACAACAGTATCGGCTGCCTAA
GAGATATGTCGCACCACCGAAACCTTCAAGACCTTGACCTCAGCCACAAC
GCGGTGGAGGTGCTGGAGGGACTGTCAGCTCTCAAGTGCCTGAGGAGCTT
GAAGATGAACAACAACCATATAAGGCGAATCGAAGGGCTCGACGTATCGG
CTGCCTAAGAGATATGTCGCACCACCGAAACCTTCAAGACCTTGACCTCA
GCCACAACGCGGTGGAGGTGCTGGAGGGACTGTCAGCTCTCAAGTGCCTG
AGGAGCTTGAAGATGAACAACAACCATATAAGGCGAATCGAAGGGCTCGA
CGGGTTGCCTCTGGTGGAGCTGCACCTCGACCACAACTACATAGAGAAGG
CGGAGAATGTTGGTTCCGACAAGCTGGCGAACCTCCGCGTCCTTCGACTT
GGCTTTAACGCCATCGGAAACCTCTCCAACCTCAAGGACTGCGTATCGCT
AGCTACTCTCGACGTTCGGTTCAACAAGGTTGCCTCTGGTGGAGCTGCAC
CTCGACCACAACTACATAGAGAAGGCGGAGAATGTTGGTTCCGACAAGCT
GGCGAACCTCCGCGTCCTTCGACTTGGCTTTAACGCCATCGGAAACCTCT
CCAACCTCAAGGACTGCGTATCGCTAGCTACTCTCGACGTTCGGTTCAAC
AAGATTTCGGCTGTGCGCCAGGTAGAATACCTGCAGGAGTGCCAGTTTCT
GCACACGGTCGTCTTGGAAGGGAACCCGATGGACCGGCTGGAGTCCTATC
GCGCGCGGGTCATATTTCGGCTGCAGAGGCTGATGGTTCTCGACAGGAAC
AAGGATTTCGGCTGTGCGCCAGGTAGAATACCTGCAGGAGTGCCAGTTTC
TGCACACGGTCGTCTTGGAAGGGAACCCGATGGACCGGCTGGAGTCCTAT
CGCGCGCGGGTCATATTTCGGCTGCAGAGGCTGATGGTTCTCGACAGGAA
CAAGATCTCCCCTGAGGAGAAGGTGAAGGCTGTGAATCTTATGGGGGACG
AAGAAAGCGAACTTCCTCACCGAAAGCAGATCTCCCCTGAGGAGAAGGTG
AAGGCTGTGAATCTTATGGGGGACGAAGAAAGCGAACTTCCTCACCGAAA
GCAGGTTTTCCACAAGTATCTACCTGGAGCAGAGTTCACCAACACCCTGC
CCCCGTTCTGCGAGCCCGAAGGGCCTCCGGTGCCGGAATCGGACCAAGGG
GTGGGGCCCGAAACGGTGAATAGCAGCAGCATTGGCTCGGCGGGCGTAAG
CGACACCCCAGAGGAAACCTTCCGACGTAGTACTGGGGTCGTCACCCGTG
AAGCAACGCCCTGCGTCGAGGAGGTACTCGCGACGACCTCTTTCGACGCG
TCGTCGGGCGAAGTGTTGCAGTGAGTTTTCCACAAGTATCTACCTGGAGC
AGAGTTCACCAACACCCTGCCCCCGTTCTGCGAGCCCGAAGGGCCTCCGG
TGCCGGAATCGGACCAAGGGGTGGGGCCCGAAACGGTGAATAGCAGCAGC
ATTGGCTCGGCGGGCGTAAGCGACACCCCAGAGGAAACCTTCCGACGTAG
TACTGGGGTCGTCACCCGTGAAGCAACGCCCTGCGTCGAGGAGGTACTCG
CGACGACCTCTTTCGACGCGTCGTCGGGCGAAGTGTTGCAGTGA
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