mRNA_L-elsbetiae_contig1635.4321.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: D7FQ63_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ63_ECTSI) HSP 1 Score: 447 bits (1149), Expect = 1.950e-151 Identity = 296/455 (65.05%), Postives = 318/455 (69.89%), Query Frame = 1 Query: 1 FKAACRGTRGREEIALYREQQAAASKIQARIRGDRARKDFSRAAPGGVPLDRADIKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSRLXXXXXXXXXXXXXXSVLDYELFEGEDFSWRASQEWLHDWRSDVVRSASMLHRVNISYNSIGCLRDMSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVELHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPGAEFTNTLPPFCEPEGPPVPESDQGVGPETVNSSSIGSAGVSDTPEE---TFRRST---------GVVTREATPCVEEVLATTSFDASS 1329 +AACRGTRGREE ALYR RKDF+R +PGG+PLDRADIKKGLHTLGRNP DLRLCYIGLMAANAGVSNIN+I +FPLLQTVDLSGNCISSTKPL I LRD+SHHRN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GLPLVELHLDHNYIEKAENVGS KLA+LR+LRLGFN IGNLSNLK C+SL TLDVRFNK+SAVRQVEYLQECQFLHT+VLEGNPMDRLE+YRARVIFRLQ LM+LDRNKISPEEKVKAVNLMGDEES+LPHRKQVFHK+LPGAEFTNTLPPF EPEGPP PE D PETV+ S D+PEE F ST VV+REA CVE V+ +S+ SS Sbjct: 50 IQAACRGTRGREETALYRXXXXXXXXXXXXXXXXXXRKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIAEFPLLQTVDLSGNCISSTKPLX--------------------------------------------XXXXXXXXXXXXXXXXXIDSLRDLSHHRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGSGKLASLRILRLGFNDIGNLSNLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEAYRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDEESDLPHRKQVFHKHLPGAEFTNTLPPFREPEGPPAPEPDPAEKPETVSGS--------DSPEEGGFVFEDSTVSIVDPPAPTVVSREAISCVEHVMTASSYGFSS 452
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A6H5KB11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB11_9PHAE) HSP 1 Score: 206 bits (523), Expect = 2.690e-60 Identity = 103/113 (91.15%), Postives = 110/113 (97.35%), Query Frame = 1 Query: 1 FKAACRGTRGREEIALYREQQAAASKIQARIRGDRARKDFSRAAPGGVPLDRADIKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSR 339 F+AACRGTRGREE ALYREQQAAASKIQARIRGD+ARKDF+R +PGG+PLDRADIKKGLHTLGRNP DLRLCYIGLMAANAGVSNIN+IV+FPLLQTVDLSGNCISSTKPLSR Sbjct: 56 FQAACRGTRGREETALYREQQAAASKIQARIRGDKARKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSR 168
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A835YJY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY7_9STRA) HSP 1 Score: 202 bits (515), Expect = 7.560e-56 Identity = 176/406 (43.35%), Postives = 227/406 (55.91%), Query Frame = 1 Query: 25 RGREEIALYREQQAAASKIQARIRGDRARKDFSRAAPGGVPLDRADIKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSRLXXXXXXXXXXXXXXSVLDYELFEGED------------------FSWRASQEW--LHDWRSDVVRSASMLHRVNISYNSIGCLRDMSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVELHLDHNYIEKAENVGSDKLAN-------LRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPG--AEFTNTLPPFCEPEGPPV 1155 R R I L EQ AA+ IQ+R+R A+K + A GG LDRA +K+GLHTLGR P LR C G G+ ++ A+ D+PLLQT+D+S N ++ PL L VLD+E+ G D + A W L DWRS VR+ S L ++S N+I +RD+S HRNL L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+GLPLVEL L + + N LR L L N I LS L+ C SL TLD+ N +SA+RQVE+L++C L + L E YR RV+ RLQ L +LD +SP+EKV+A+NL G E S+L +R+ +F A++ + LPP+ EPE P+ Sbjct: 99 RKRRRIPLKEEQGGAATLIQSRVRTRLAQKRVAALADGGTTLDRAAVKRGLHTLGRAPHSLRHCLTGCDLRGLGLRDVAALSDWPLLQTLDVSDNALTELAPLCALPFLCELHAARNGVTEVLDFEVLRGRDQTIALNAYPHVLCAANGTHARSADMPWEDLLDWRSSAVRAESALALADLSENAIAAMRDLSPHRNLHTLLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLPLVELDLXXXXXXXXXXXAAPESGNGCAPPLLLRRLNLADNFIIELSGLQRCASLVTLDLSGNALSALRQVEWLRDCAVLRELSLARTAAAEQEWYRLRVLLRLQGLTLLDSEPVSPQEKVEALNLAGGEGSDLANRQALFRGTFQEHEAQWCDLLPPYQEPEPAPM 504
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A8J2T0T5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0T5_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.800e-24 Identity = 120/428 (28.04%), Postives = 172/428 (40.19%), Query Frame = 1 Query: 16 RGTRGREEIALYREQQAAASKIQARIRGDRARKDFSRAAPGGVPLDRADIKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSRLXXXXXXXXXXXXXXSVLDYEL---FEGEDFSWRASQEWLHDWRSDVVRSASMLHRVNISYNSIGCLRDMSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVELHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDV---------------------------------------------RFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPGA-EFTNTLPPFCEPEGPP 1152 RG E+ REQ AA+ I RG R+ +R G L+R DI +GLHTLGR DL+ Y+G + + +I+ + + LQ +D+S N ++S PL L S D E+ GE W + S L V++S N I L + S HR L+ DG + E+ G L+ L++L + N + +S +L LDV R N I VR+VE+L+ +++L+GNP L YR RV+FRLQ+L VLD +S ++K+KAVNL G +ES+L HR++ F K+ A EF + LPPF EPE P Sbjct: 51 RGRIACREVDERREQTQAATSIGRIYRGKVTRR--ARVDRGPRSLERDDIAQGLHTLGRTA-DLKHAYLGCSVSGLQLVDIDVLQSYEHLQALDVSCNNLTSLSPLEHLPYLTRLNASGNKL-SQFDLEIPRNVPGEKA-----------WTLGRKHAGSNLIEVDLSDNDIEVLGEQSTHRRLEKF---------------------------------VLDGNRMYEI------------TGLQNLSRLKILSMRNNDLSYVSXXXXXSALVELDVGGNRLTTMGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDNCIEKVREVEFLERLPLFSSLLLQGNPCSDLPFYRRRVVFRLQQLRVLDGIAVSSDDKIKAVNLHGGDESDLKHRRETFRKHFGSALEFEDPLPPFVEPEKSP 418
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A3F2RVW1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVW1_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 5.610e-18 Identity = 91/348 (26.15%), Postives = 152/348 (43.68%), Query Frame = 1 Query: 163 IKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSRLXXXXXXXXXXXXXXSVLDYELFE-GEDFSWRASQEWLHDWRSDVVRSASM-------------------LHRVNISYNSIGCLRDMSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVE-LHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLES----YRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPGAEFTNTLPPF 1131 + K L LGRNP Y + +S+I I +FP +Q + + N + + PL + VLD+++ + D +W W+ ++R A++ L +++++N+I + +S R L+ LD GL +E L L HN + ++ G L L L + N + LS+L +CV L L++ +N+++ + ++ L ++L + L G P+ ++ YRARVI RL +L LD ++ +EKVKA+ + G S+L R+QV KYLPG EF N LPP Sbjct: 2 VSKRLGVLGRNPFTQAHIYTTATLTDLRLSDIEVIREFPHIQHLVCNQNELKTLDPLKHIPLLLTLDAEENQLTEVLDFQVPKCTPDNAWVDGARWI----GSLLRKATLNRNRIVSMPTHELSTTHPFLQELHLAFNTIEEISGVSQLRFLRVLDLSHNRLSSIRGLVANEDSSH---------------GLQALETLLLSHNQLTAIDD-GVAFLPRLTHLDVAHNQLKTLSSLGECVQLQRLELAYNRVADINELNCLANLRYLGQLSLGGCPLVEIQVSLIFYRARVIRRLLQLQKLDDETVTSKEKVKALVMHG---SDLDARRQVAAKYLPGQEFANFLPPL 326
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A3R7K2Y1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K2Y1_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.940e-16 Identity = 89/345 (25.80%), Postives = 150/345 (43.48%), Query Frame = 1 Query: 163 IKKGLHTLGRNPQDLRLCYIGLMAANAGVSNINAIVDFPLLQTVDLSGNCISSTKPLSRLXXXXXXXXXXXXXXSVLDYELFE-GEDFSWRASQEWLHDWRSDVVRSASM-------------------LHRVNISYNSIGCLRDMSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLPLVE-LHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLES----YRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPGAEFTNTL 1122 + K L LGRNP Y + +S+I I +FP +Q + + N + + PL + VLD+++ + D +W W+ ++R A++ L +++++N+I + +S R L+ LD GL +E L L HN + ++ G L L L + N + LS+L +CV L L++ +N+++ + ++ L ++L + L G P+ ++ YRARVI RL +L LD ++ +EKVKA+ + G S+L R+QV KYLPG EF N L Sbjct: 2 VSKRLGVLGRNPFTQAHIYTTATLTDLRLSDIEVIREFPHIQHLVCNQNELKTLDPLKHIPLLLTLDAEENQLTEVLDFQVPKCTPDNAWVDGARWI----GSLLRKATLNRNRIVSMPTHELSTTHPFLQELHLAFNTIEEISGVSQLRFLRVLDLSHNRLSSIRGLVANEDSSR---------------GLQALETLLLSHNQLTVIDD-GVAFLPRLTHLDVAHNQLKTLSSLGECVQLQRLELAYNRVADINELNCLANLRYLGQLSLGGCPLVEIQVSLIFYRARVIRRLLQLQKLDDEIVTSKEKVKALVMHG---SDLDARRQVAAKYLPGQEFANFL 323
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A7S2BD69_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BD69_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.970e-14 Identity = 60/166 (36.14%), Postives = 81/166 (48.80%), Query Frame = 1 Query: 673 DGLPLVELHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRL---------ESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYLPGAEFTNTLPPFCEPE 1143 DGLPL EL LD+N I+ EN+ +K+ L AVR+VEY+Q L ++VL GNP+ + YR RV+ RLQ L LD + EEK KA+NL G + S++ +R +VF K P E++NTLP F E E Sbjct: 9 DGLPLTELALDNNKIKFIENL--EKVPCLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVREVEYVQNLPLLCSLVLTGNPVAPVVIPEDPSLPNFYRLRVLVRLQGLTSLDGKLATAEEKTKAMNLHGGDNSDVLNRARVFKKVFPDMEYSNTLPCFVETE 172
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: Q1L8G4_DANRE (Leucine-rich repeats and guanylate kinase domain-containing n=4 Tax=Danio rerio TaxID=7955 RepID=Q1L8G4_DANRE) HSP 1 Score: 68.6 bits (166), Expect = 1.250e-8 Identity = 54/160 (33.75%), Postives = 77/160 (48.12%), Query Frame = 1 Query: 673 DGLPLVELHLDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFHKYL----PGAEFTNTLPPFCEP 1140 D LPL EL L N I K EN+ + L NL+VL L N I L T+++ N I+ +++ +L + L + L NP+ + YR VIF LQ L++LD+ ++ EEKV AVN + R + H P F +TLP P Sbjct: 157 DHLPLRELCLAGNMINKIENLQT--LHNLQVLDLSCNRIQXXXXXXXLRFLGTVNLESNLITEIKEAAHLHDLILLREINLLKNPVQDHDDYRIAVIFLLQHLILLDKQTVTAEEKVAAVNKYDPPLEVVAARDHMTHLVYQLMQPQVIFDSTLPSLDAP 314
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: A0A4V1IT65_9FUNG (Outer arm dynein light chain 1 (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4V1IT65_9FUNG) HSP 1 Score: 62.4 bits (150), Expect = 2.290e-7 Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 1 Query: 700 LDHNYIEKAENVGSDKLANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKA 1029 L +N I + ENVG KL LR L+L N I ++ NL+ +L LD+ N + +E L++ L + L GNP+++L+ YRA I L +L VLD +I+ E+++A Sbjct: 52 LQNNQIGRIENVG--KLKGLRYLQLALNNIRHIENLQHNEALEKLDLTVNFVENPLDLENLKDNYRLRELYLVGNPVNKLDGYRAFAIHTLPQLRVLDGVEITRTERLEA 159
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Match: UPI0013903C59 (leucine-rich repeat and guanylate kinase domain-containing protein-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013903C59) HSP 1 Score: 63.9 bits (154), Expect = 3.780e-7 Identity = 34/113 (30.09%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 748 LANLRVLRLGFNAIGNLSNLKDCVSLATLDVRFNKISAVRQVEYLQECQFLHTVVLEGNPMDRLESYRARVIFRLQRLMVLDRNKISPEEKVKAVNLMGDEESELPHRKQVFH 1086 L L+ L L N I ++ L+ L +D++ N+I + +V Y++E + NP+ L YR ++FR+Q L+ LD++K++PEEK+ A+N+ + R + H Sbjct: 252 LKTLQKLNLASNCIRSMKGLQGHPMLQEVDLQENQIIDIAEVRYIRELKXXXXXXXXSNPIQSLPDYRLSLLFRIQTLLELDKSKVTPEEKIAAMNMYSPPMEVVAARDHMLH 364 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1635.4321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1635.4321.1 >prot_L-elsbetiae_contig1635.4321.1 ID=prot_L-elsbetiae_contig1635.4321.1|Name=mRNA_L-elsbetiae_contig1635.4321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=449bp FKAACRGTRGREEIALYREQQAAASKIQARIRGDRARKDFSRAAPGGVPLback to top mRNA from alignment at L-elsbetiae_contig1635:974..4936+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1635.4321.1 ID=mRNA_L-elsbetiae_contig1635.4321.1|Name=mRNA_L-elsbetiae_contig1635.4321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3963bp|location=Sequence derived from alignment at L-elsbetiae_contig1635:974..4936+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1635:974..4936+ >mRNA_L-elsbetiae_contig1635.4321.1 ID=mRNA_L-elsbetiae_contig1635.4321.1|Name=mRNA_L-elsbetiae_contig1635.4321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2694bp|location=Sequence derived from alignment at L-elsbetiae_contig1635:974..4936+ (Laminarionema elsbetiae ELsaHSoW15)back to top |