mRNA_L-elsbetiae_contig16295.4300.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Match: D7G522_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G522_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 8.750e-13 Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 1 Query: 1 KVKQCSLCNEVWYCGQECQTSDWKAGHKTECSRK 102 +VKQCSLCNEVWYCG ECQ SDW GHK +CSRK Sbjct: 368 QVKQCSLCNEVWYCGNECQASDWSKGHKNDCSRK 401
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Match: UPI000440B3FC (hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000440B3FC) HSP 1 Score: 55.8 bits (133), Expect = 4.590e-8 Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 1 Query: 1 KVKQCSLCNEVWYCGQECQTSDWKAGHKTECSR 99 K+++CS C + WYC +ECQT DWK GHK C+R Sbjct: 271 KLERCSRCRKAWYCSKECQTKDWKIGHKANCNR 303
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Match: A0A7S2UI28_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI28_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 4.940e-8 Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 1 Query: 1 KVKQCSLCNEVWYCGQECQTSDWKAGHKTECSR 99 K+K+C+ C VWYCG+ECQ DWK GHK +C + Sbjct: 356 KLKKCTRCKAVWYCGRECQLKDWKLGHKVDCCK 388
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Match: A0A150GG83_GONPE (MYND-type domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GG83_GONPE) HSP 1 Score: 51.6 bits (122), Expect = 1.540e-6 Identity = 19/35 (54.29%), Postives = 28/35 (80.00%), Query Frame = 1 Query: 1 KVKQCSLCNEVWYCGQECQTSDWKAGHKTECSRKK 105 +++QC+ C EV YCG ECQ + W+A HK+ECSR++ Sbjct: 1021 RLRQCTGCREVRYCGPECQRAHWRAAHKSECSRQR 1055
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Match: A0A0K9QTE9_SPIOL (MYND-type domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QTE9_SPIOL) HSP 1 Score: 49.3 bits (116), Expect = 1.020e-5 Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 1 KVKQCSLCNEVWYCGQECQTSDWKAGHKTECS 96 + ++CS+C V YC + CQT DWKAGHK ECS Sbjct: 297 EFRRCSVCGVVNYCSRGCQTLDWKAGHKVECS 328
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Match: A0A835SB76_CHLIN (MYND-type domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SB76_CHLIN) HSP 1 Score: 48.1 bits (113), Expect = 2.580e-5 Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 4 VKQCSLCNEVWYCGQECQTSDWKAGHKTECSR 99 ++C C YC Q+CQT DW+AGHK EC R Sbjct: 729 TRKCGQCRRRRYCSQDCQTKDWRAGHKAECKR 760
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Match: A0A409YL39_9AGAR (MYND-type domain-containing protein n=1 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409YL39_9AGAR) HSP 1 Score: 48.1 bits (113), Expect = 2.580e-5 Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 1 Query: 7 KQCSLCNEVWYCGQECQTSDWKAGHKTECSRK 102 ++CS C+ YC +ECQT DWKAGHK C K Sbjct: 481 RKCSACSTTLYCSKECQTEDWKAGHKVVCKLK 512
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Match: A0A166JEV4_9AGAM (MYND-type domain-containing protein n=1 Tax=Peniophora sp. CONT TaxID=1314672 RepID=A0A166JEV4_9AGAM) HSP 1 Score: 47.8 bits (112), Expect = 3.550e-5 Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 4 VKQCSLCNEVWYCGQECQTSDWKAGHKTECSR 99 + +CS C+ V YC + CQT DW AGHKT+C++ Sbjct: 506 LMKCSGCSTVTYCSKTCQTKDWSAGHKTQCTK 537
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Match: A0A7S2FCS6_9STRA (Hypothetical protein n=3 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FCS6_9STRA) HSP 1 Score: 47.8 bits (112), Expect = 3.550e-5 Identity = 15/32 (46.88%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 4 VKQCSLCNEVWYCGQECQTSDWKAGHKTECSR 99 + +CS C +YCG++CQ +DW+ GHK+EC + Sbjct: 114 IMKCSKCKSRYYCGRDCQMTDWREGHKSECKK 145
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Match: A0A067CXE4_SAPPC (MYND-type domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CXE4_SAPPC) HSP 1 Score: 47.0 bits (110), Expect = 3.790e-5 Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 1 Query: 13 CSLCNEVWYCGQECQTSDWKAGHKTECSRKK 105 C+ C V YC +ECQT DWKAGHK C KK Sbjct: 135 CARCISVRYCSKECQTEDWKAGHKRACKPKK 165 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16295.4300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16295.4300.1 >prot_L-elsbetiae_contig16295.4300.1 ID=prot_L-elsbetiae_contig16295.4300.1|Name=mRNA_L-elsbetiae_contig16295.4300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=36bp KVKQCSLCNEVWYCGQECQTSDWKAGHKTECSRKK*back to top mRNA from alignment at L-elsbetiae_contig16295:153..260+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16295.4300.1 ID=mRNA_L-elsbetiae_contig16295.4300.1|Name=mRNA_L-elsbetiae_contig16295.4300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=108bp|location=Sequence derived from alignment at L-elsbetiae_contig16295:153..260+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16295:153..260+ >mRNA_L-elsbetiae_contig16295.4300.1 ID=mRNA_L-elsbetiae_contig16295.4300.1|Name=mRNA_L-elsbetiae_contig16295.4300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=216bp|location=Sequence derived from alignment at L-elsbetiae_contig16295:153..260+ (Laminarionema elsbetiae ELsaHSoW15)back to top |