mRNA_L-elsbetiae_contig16280.4292.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 194 bits (492), Expect = 3.010e-52 Identity = 114/245 (46.53%), Postives = 144/245 (58.78%), Query Frame = 1 Query: 301 AVQKEGRVDILRAVIDHGADLEPVRITQKTPLHYAAACHNNANATDVLVGAGANIEARDGLGCTPLHHASDNLRREVLLCLLKHGANVDAQDDDLQTPLMSAAERAGTQGTAEVADSLLRAGADETIVDDDGDKAAGMIGVNVEEETRLADDFERVHELLANAPADRAWRRRGYLVLCRVCLDRVQQMQVMSGAHHINIAQKTRSCAQLAGAGRVAGDSTVDESTGGDWAVVMTKVLLLQEEGIF 1035 A EG V+ILRA+I+HGAD++ V Q+T + L TPLM A +AG QG AEV +SLLRAGADETI + G+KA MIG +VEEE RL +D ERV ELLANAPADRAWRRRGYL++CR DRV + ++ SG H+ N+A++TRS A++A A +AG+STVDESTGG+WAVV++KV+ LQEEGIF Sbjct: 150 AAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIF 393
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 144 bits (363), Expect = 2.620e-34 Identity = 91/185 (49.19%), Postives = 113/185 (61.08%), Query Frame = 1 Query: 313 EGRVDILRAVIDHGADLEPVRITQKTPLHYAAACHNNANATDVLVGAGANIEARDGLGCTPLHHASDNLRRE---VLLCLLKHGANVDAQDDDLQTPLMSAAERAGTQGTAEVADSLLRAGADETIVDDDGDKAAGMIGVNVEEETRLADDFERVHELLANAPADRAWRRRGYLVLCRVCLDRVQ 858 EG VD +R +I+HGAD++ LH+A A +N A DVL+ AGAN + G T LH A+ R L LLKHGA+V+AQ + L A RAG QG EV D LLR GADET V +G +AA IG+ V EE R+ ++FE V +LLANAPADRAWRRR LVLCR D++Q Sbjct: 170 EGHVDFIRTLIEHGADVDATNYGGVAALHHATA-NNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQ 353
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 145 bits (365), Expect = 7.350e-34 Identity = 90/196 (45.92%), Postives = 118/196 (60.20%), Query Frame = 1 Query: 301 AVQKEGRVDILRAVIDHGADLEPVRITQKTPLHYAAACHNNANATDVLVGAGANIEARDGLGCTPLHHASDNLRREVLLCLLKHGANVDAQDDDLQTPLMSAAERAGTQGTAEVADSLLRAGADETIVDDDGDKAAGMIGVNVEEETRLAD--DFERVHELLANAPADRAWRRRGYLVLCRVCLDRVQQMQVMSGA 882 A QK G +LRA++ HG D+ R T LH AA +N A DVLV AGA++E D CTP A N E L L KHGAN++A+D +TPL+ AA +AG QG + D LLR GADET ++ DG AA ++G ++E + D ERV +LL NAPADRAWRRRG LVLCR + ++++ S + Sbjct: 163 AAQK-GDACVLRAILQHGVDVNR-RTDGYTSLHVAA-LNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSS 355
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 143 bits (361), Expect = 1.570e-33 Identity = 95/219 (43.38%), Postives = 129/219 (58.90%), Query Frame = 1 Query: 298 VAVQKEGRVDILRAVIDHGADLEPVRITQKTPLHYAAACHNNANATDVLVGAGANIEARDGLGCTPLHHASDNLRREVLLCLLKHGANVDAQDDDLQTPLMSAAERAGTQGTAEVADSLLRAGADETIVDDDGDKAAGMIGVNVEEETRLAD--DFERVHELLANAPADRAWRRRGYLVLCRVCLDRVQQMQVMSGAHHINIAQKTRSC---AQLAGAG 939 +A QK G +LRA++ HG D+ R T LH AA +N A DVLV AGA++E D CTP A N E L L KHG+N++A+D +TPL+ AA +AG QG + D LLR GADET ++ DG AA ++G ++E + D ERV +LL NAP DRAWRRRG+LVLCR + ++++ S N + RS A+++GAG Sbjct: 113 LAAQK-GDACVLRAILQHGVDVNR-RTDGYTSLHVAA-LNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSN-GPRVRSLSTGARISGAG 327
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 138 bits (347), Expect = 1.690e-30 Identity = 100/232 (43.10%), Postives = 129/232 (55.60%), Query Frame = 1 Query: 349 HGADLEPVRITQKTPLHYAAACHNNANATDVLVGAGANIEARDGLGCTPLHHASDNLRREVLLCLLKHGANVDAQDDDLQTPLMSAAERAGTQGTAEVADSLLRAGADETIVDDDGDKAAGMIGVNVEEETRLADDFERVHELLANAPADRAWRRRGYLVLCRVCLD--RVQQMQVMSGAHHINIAQKTRSCAQLAGAGRVAGDSTVDESTGGDWAVVMTKVLLLQEEGIFP 1038 HG D+ T L A+A + A A DVL AGANIEA+ G TPLH AS R + LL+HGA+V ++ QTPL A +AG+ GTAE+ D LLR GADET V ++G AA M+ + EE LA+D +RV +LLA APADRAWRRRG+L+L R RVQ S A +A++TRS + + A DWA V V +L +G+ P Sbjct: 546 HGGDVNAKVNNGITALRVASA-FDKAPAIDVLTEAGANIEAQAN-GSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEI-------------DWAGV---VSMLMGDGVDP 759
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE) HSP 1 Score: 114 bits (285), Expect = 3.580e-24 Identity = 82/205 (40.00%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 250 RGREPSMRRVPIPSHLVAVQKEGRVDILRAVIDHGADLEPVRITQKTPLHYAAACHNNANATDVLVGAGANIEARDGLGCTPLHHASDNLRREVLLCLLKHGANVDAQDD-DLQTPLMSAAERAGTQGTAEVADSLLRAGADETIVDDDGDKAAGMIGVNV-EEETRLADDFERVHELLANAPADRAWRRRGYLVLCRVCLDRVQ 858 +G +P+ +HL+ K V I+ A++ GAD+ + + PL + AA HNNA A L AG IE R G TPL +A+ E +L LL+ GANV++++ + +PL SA +G + AD LLR GADET VD D M+ + ERV ELLA AP DRAWRRRG+LV C DRVQ Sbjct: 47 KGIDPTCVTTREETHLLLAVKRNHVAIINALLAEGADVNFLTTRRPVPLAHIAALHNNAAAMPALFKAGVYIEGRSPKGRTPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPLCSACR----EGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQ 247
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 114 bits (286), Expect = 9.760e-24 Identity = 88/222 (39.64%), Postives = 112/222 (50.45%), Query Frame = 1 Query: 391 PLHYAAACHNNANATDVLVGAGANIEARDGLGCTPLHHASDNLRR-EVLLCLLKHGANVDAQDDDLQTPLMSAAERAGTQGTAEVADSLLRAGADETIVDDDGDKAAGMIGVNVE-EETRLADDFERVHELLANAPADRAWRRRGYLVLCRVCLDRVQQMQVMSGAHHINIAQKTRSCAQLA-----GAGRVAGDSTVDESTGGDWAVVMTKVLLLQEEGIF 1035 P + A N A VL+ AGA+I+ TPLH AS E + AA AG QG+AE+ D LLR GADET D +G + A +G +E + L + VHELLANAPADRAWRRRG LVLCR L R + Q G ++++TRS A+LA GAG G T + TG +W +V+ L+EEGIF Sbjct: 196 PALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRG--TPEGGTGDEWRSASKRVVELEEEGIF 415
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 109 bits (273), Expect = 1.080e-21 Identity = 85/254 (33.46%), Postives = 139/254 (54.72%), Query Frame = 1 Query: 316 GRVDILRAVID-HGADLEPVRITQKTPLHYAAA----CHNNANATDVLVGAGA--NIEARDGLGCTPLHHASDNLRREV--LLCLLKHGANVDAQDDDLQTPLMSAAERAGTQGTAEVADSLLRAGADETIVDDDGDKAAGMIGV----NVEEETRLADDFERVHELLANAPADRAWRRRGYLVLCRVCLDRVQQMQVMSGAHHIN-IAQKTRSCAQLAGAGRVAGDSTVDESTGGDWAVVMTKVLLLQEEGIF 1035 G D+L+A++D ++++ LHY A+ + +A VL+GAGA N++ + TPLH A + + LL+ GAN++A+ TPL A R +G+ V + LLR GADE + ++DGD A ++GV ++++E R AD+ +R+H +LA APADR+WRRRG+LVL R C RV S + I+ I + A+++G G D ++ D ++ +++ L+ EG+F Sbjct: 256 GHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTR--LRGS--VVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADN-QRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLF 504
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Match: D7G0W2_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W2_ECTSI) HSP 1 Score: 104 bits (260), Expect = 2.430e-21 Identity = 87/256 (33.98%), Postives = 134/256 (52.34%), Query Frame = 1 Query: 301 AVQKEGRVDILRAVIDHGADLEPVRITQKTPLHYAAACHNNANATDVLVGAGANIEARDGLGC--TPLHHASDNL-RREVLLCLLKHGANVDAQDDDL-QTPLMSAAERAGTQGTAEVADSLLRAGADETIVDDDGDKAAGMIGVNVEEETRLA---DDFERVHELLANAPADRA---WRRRGYLVLCRVCLDRVQQMQVMSGAHHINIAQKTRSCAQLA-GAGRVAGDSTVDESTGGDWAVVMTKVLLLQEEGIF 1035 +V+ +G +D+ R V+ GA T LH+A + NA+A D+LVGAGAN+EA+ TPLH A+ V+ L +HGA+V AQ+ TPL AA+ T+ + E D+LL+AGADET +D G ++ + + ++ ER +L NAP DRA W RR + V+CR DRV+ + V+ A+KT + A A G+GR + + ++ M ++ L+E+G+F Sbjct: 22 SVRSDG-MDLTRQVLQRGAIATESSSDGCTALHWAG-WNMNASAIDLLVGAGANLEAKIAADAEATPLHLAARQAGNAAVIEALARHGADVHAQETPSGNTPLHVAAQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAAGDLMGASVNEAERTRSVLVNAPKDRAQRAWSRRSFFVMCRAHPDRVR-LTVVDDTTTSPRAKKTMAAAATAVGSGRRG----ANRDSADNFQRAMRSLIRLKEDGLF 270
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 2.270e-18 Identity = 84/239 (35.15%), Postives = 103/239 (43.10%), Query Frame = 1 Query: 322 VDILRAVIDHGADLEPVRITQKTPLHYAAACHNNANATDVLVGAGANIEARDGLGCTPLHHASDNLRREVLLCLLKHGANVDAQDDDLQTPLMSAAERAGTQ-GTAEVADSLLRAGADETIVDDDGDKAAGMIGVNVEEETRLADDFERVHELLANAPADRAWRRRGYLVLCRVCLDRVQQMQVMSGAHHINIAQKTRSCAQLAGAGRVAGDSTVDESTGGDWAVVMTKVLLLQEEGIF 1035 V+ILR +IDHG ++ + T LH+AA N ANA DVLVGAGA+I+AR+ G PL + G + G+ +V LLR GADETIV G AA IG T DD ER LL APADRAWRRRG LVLC DR+Q GGD A ++ +VL L+E G+F Sbjct: 183 VEILRMLIDHGMEVN-LAAAFGTALHWAAKA-NRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDD-ERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQ--------------------------------------LGGDLAGLVDRVLGLEEVGVF 380 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16280.4292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16280.4292.1 >prot_L-elsbetiae_contig16280.4292.1 ID=prot_L-elsbetiae_contig16280.4292.1|Name=mRNA_L-elsbetiae_contig16280.4292.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=299bp MDTASSGSLLWSFGSLIGSVDCRRGREPSMRRVPIPSHLVAVQKEGRVDIback to top mRNA from alignment at L-elsbetiae_contig16280:301..3713- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16280.4292.1 ID=mRNA_L-elsbetiae_contig16280.4292.1|Name=mRNA_L-elsbetiae_contig16280.4292.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3413bp|location=Sequence derived from alignment at L-elsbetiae_contig16280:301..3713- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16280:301..3713- >mRNA_L-elsbetiae_contig16280.4292.1 ID=mRNA_L-elsbetiae_contig16280.4292.1|Name=mRNA_L-elsbetiae_contig16280.4292.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1794bp|location=Sequence derived from alignment at L-elsbetiae_contig16280:301..3713- (Laminarionema elsbetiae ELsaHSoW15)back to top |