mRNA_L-elsbetiae_contig16276.4287.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: D8LSM6_ECTSI (GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM6_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 3.060e-144 Identity = 206/224 (91.96%), Postives = 215/224 (95.98%), Query Frame = 1 Query: 1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672 C QKYGE+QTA+FWCLGLGEPW ISGLHGDGIYDMMDNV EHLY+VD AE+EDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGK VDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADR+QSDGRACVVVCNKWDLVEDK+D+SYNKAV+YARQMLSPVKWAEVCFTSAKTGQRCTK+ Sbjct: 342 CESQKYGEIQTAEFWCLGLGEPWPISGLHGDGIYDMMDNVAEHLYEVDENAEEEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGK---VDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRIQSDGRACVVVCNKWDLVEDKDDSSYNKAVEYARQMLSPVKWAEVCFTSAKTGQRCTKL 562
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: A0A836CJC9_9STRA (GTPase Der n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC9_9STRA) HSP 1 Score: 296 bits (759), Expect = 9.690e-98 Identity = 139/218 (63.76%), Postives = 178/218 (81.65%), Query Frame = 1 Query: 19 GEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672 G Q A+FW LGLGEPW +SGLHG G+ ++++ +K HLY D + + + INV+IVGRPNVGKSSLLN+L+G+ R+IVSDV GTTRD+IDA+FERG RTYRL+DTAGIRRK K ++YGNEFFM+NRAFKAIRR+DVVLL++DV GI DQDRVLA+R+ ++G+ACVVV NKWD VE K+D +Y K++ Y R+ML PV+WA++ FTSA TGQR + Sbjct: 2 GAAQAAEFWALGLGEPWPVSGLHGYGVAEVLEQIKPHLYPADTSGDADTTINVSIVGRPNVGKSSLLNKLYGQERAIVSDVAGTTRDTIDALFERGDRTYRLIDTAGIRRKKK---IEYGNEFFMINRAFKAIRRSDVVLLVIDVVDGIKDQDRVLAERIAAEGKACVVVLNKWDAVE-KDDKTYLKSIAYVREMLPPVRWADIVFTSALTGQRTLSI 215
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: W7TQC4_9STRA (GTPase Der n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQC4_9STRA) HSP 1 Score: 275 bits (704), Expect = 2.360e-85 Identity = 135/224 (60.27%), Postives = 172/224 (76.79%), Query Frame = 1 Query: 1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672 C GE + FW LGLGEP+ +SGLHG G+ +M++ + H+Y+V+ AE E+ I VAIVGRPNVGKSSLLNRL+G+ R+IVSDV GTTRD++DA+ E G++YR +DTAGIRR+ K V+YGNEF MVNRA KA+RRADVVLL+VDV GI DQD++LA R+ DGRACV+V NKWD VE K+D ++N+AV Y ++ L V WA+V FTSA TGQRC K+ Sbjct: 349 CETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEE-AEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKK---VEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVE-KDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKI 567
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: B7FRD0_PHATC (GTPase Der n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRD0_PHATC) HSP 1 Score: 256 bits (655), Expect = 2.200e-79 Identity = 129/235 (54.89%), Postives = 169/235 (71.91%), Query Frame = 1 Query: 1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDN---INVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERG--------GRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672 C +K G + ADFW LGLGEP+ +S LHG G ++M+ + + + + +T + ED IN+AI+GRPNVGKSSLLN +FG+TR+IVS++ GTTRDSIDA+ ER YR VDTAGIRRKGK VD+G EFFMVNRA +AIRRADVVLL++D +G+ +QDRVLA ++ DGRACV+VCNKWD V DK+ +Y+K+V Y R+ L ++WA + F SA TGQR K+ Sbjct: 193 CESEKTGAMSAADFWGLGLGEPFPVSALHGVGTAEIMETIFDSIAEK-KTFDAEDRPEEINIAIIGRPNVGKSSLLNSIFGDTRAIVSEMAGTTRDSIDAVMERPPPPGSDDLSTIYRFVDTAGIRRKGK---VDFGPEFFMVNRALRAIRRADVVLLILDATSGVAEQDRVLAQKIADDGRACVIVCNKWDAVVDKDSTTYDKSVQYFREELPMIRWAPILFISAATGQRVGKI 423
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: B8BTK0_THAPS (GTPase Der (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTK0_THAPS) HSP 1 Score: 252 bits (644), Expect = 9.510e-79 Identity = 125/232 (53.88%), Postives = 166/232 (71.55%), Query Frame = 1 Query: 1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYD-VDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRT-------YRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672 C K G + FW LGLGEP+A+S LHG G ++M+ + + + +D + ++ INVAI+GRPNVGKSSL+N +FG R+IVSDV GTTRDSIDA+ ER YR VDTAGIRRKGK +++G EFFMVNRA +AIRRADVVLL++D AG+T+QDRVLA ++ DGRACV++CNKWD V DK+ ++Y+++V Y R+ L ++WA + F SA TGQR K+ Sbjct: 125 CESDKNGAYLASQFWNLGLGEPFAVSALHGVGTAEVMEKMFDDIAKPLDGEDDTDEEINVAIIGRPNVGKSSLINTIFGSNRAIVSDVAGTTRDSIDAIMERPSSDPEGLPTIYRFVDTAGIRRKGK---IEFGPEFFMVNRALRAIRRADVVLLVLDATAGVTEQDRVLAQKISDDGRACVILCNKWDAVIDKDSSTYDQSVKYFREELPQIRWAPILFVSAATGQRVGKI 353
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: K9W310_9CYAN (GTPase Der n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9W310_9CYAN) HSP 1 Score: 247 bits (631), Expect = 7.420e-77 Identity = 128/224 (57.14%), Postives = 162/224 (72.32%), Query Frame = 1 Query: 1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672 C + G VQ ++FW LGLGEP+ +SG+HG+G ++++ + +L VD E + I VAIVGRPNVGKSSLLN L GE RSIVS + GTTRD+ID++ ER G TYRL+DTAGIRRK V+YG+EFF +NRAFKAIRRADVVLL++DV G+TDQD+ LA R+ +GRACVV+ NKWD VE + Y + + LS V+WAEV FTSA TGQR K+ Sbjct: 122 CESPQQGLVQASEFWSLGLGEPFPMSGIHGNGTGELLEKLVTYLPSVDEIEETPE-IKVAIVGRPNVGKSSLLNALTGENRSIVSPISGTTRDAIDSVVERNGTTYRLIDTAGIRRKKN---VEYGSEFFGINRAFKAIRRADVVLLVIDVLDGVTDQDQKLAGRIAEEGRACVVIANKWDAVEKDSYTIYEHQANITTR-LSFVEWAEVIFTSALTGQRVDKI 340
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: A0A0G4FDK2_VITBC (GTPase Der n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FDK2_VITBC) HSP 1 Score: 251 bits (640), Expect = 2.450e-76 Identity = 124/225 (55.11%), Postives = 161/225 (71.56%), Query Frame = 1 Query: 1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDV-DRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672 C G Q +FW LG GEP +SG+ G G+ D++D V H+ V D ED++ +N+AI+GRPNVGKSSLLNRL GE R IVSDVPGTTRD+ID ER GR YRLVDTAGIRR+ + +EF+MVNRA +AI R+DV LL++DV GI DQD LA+++ G+AC+V+CNKWD V DK+D +Y+KAVDY R +L P++W+ + F SAKTGQR ++ Sbjct: 293 CESPTKGITQAQEFWSLGFGEPHPVSGIQGTGVGDVLDKVVTHIPWVPDVEVEDDEEVNIAIIGRPNVGKSSLLNRLLGEQRVIVSDVPGTTRDAIDVELERQGRVYRLVDTAGIRRRSRV-LAGQDSEFYMVNRAERAIERSDVCLLLIDVVQGIADQDLKLAEKIVEAGKACLVLCNKWDAV-DKDDKTYDKAVDYIRTVLYPLRWSAIEFISAKTGQRVARI 515
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: A0A846AEB7_9CYAN (GTPase Der n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846AEB7_9CYAN) HSP 1 Score: 243 bits (621), Expect = 2.220e-75 Identity = 123/224 (54.91%), Postives = 161/224 (71.88%), Query Frame = 1 Query: 1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672 C + G +Q A FW LG+GEP+ +SG+HG+G ++++ + E+L V E +D I VAI+GRPNVGKSSLLN G TRSIVS V GTTRD+ID + RG +TYRLVDTAGIRRK + V+YG EFF VNRAFKAIRR+DVVLL++D G+T+QD+ LA R++ DGRAC++V NKWD +E + Y+ D + ++ + WAEV FTSA TGQR TK+ Sbjct: 122 CESPEQGLIQAAQFWELGIGEPYPVSGIHGNGTGELLEQLVEYLPPV-IADETDDEIRVAIIGRPNVGKSSLLNAFVGNTRSIVSPVSGTTRDAIDTVVTRGEQTYRLVDTAGIRRKKQ---VEYGTEFFSVNRAFKAIRRSDVVLLVIDAIDGVTEQDQKLAGRIEEDGRACIIVVNKWDAIEKDSHTIYDHKRDISAKLYF-MDWAEVIFTSALTGQRVTKI 340
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: A0A1C0V792_9CYAN (GTPase Der n=3 Tax=Limnothrix TaxID=132605 RepID=A0A1C0V792_9CYAN) HSP 1 Score: 242 bits (618), Expect = 6.100e-75 Identity = 127/224 (56.70%), Postives = 158/224 (70.54%), Query Frame = 1 Query: 1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672 C G Q + FW LGLGEP+A+SG+HG+G D++D +L VD+ E E +N+AIVGRPNVGKSSLLN GE R+IVS + GTTRDSID + ER G+ YRL+DTAGIRRK + +DYG EFF +NRAFKAIRR+DVVLL++DV GIT+QD+ LA R+ DGRACV+V NKWD V DK+ S + R L + WAE+ FTSA TGQR K+ Sbjct: 122 CESPDQGLAQASLFWELGLGEPFAVSGIHGNGTGDLLDAALRYLPPVDQLPE-EPELNIAIVGRPNVGKSSLLNAFVGENRAIVSPISGTTRDSIDMVVERNGKRYRLIDTAGIRRK---KMIDYGPEFFSINRAFKAIRRSDVVLLVIDVLDGITEQDQRLAGRITDDGRACVLVVNKWDAV-DKDSTSIYEYERELRSRLYFLDWAEMIFTSAVTGQRVPKI 340
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: A0A1E5QEA2_9CYAN (GTPase Der n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QEA2_9CYAN) HSP 1 Score: 242 bits (617), Expect = 9.090e-75 Identity = 123/224 (54.91%), Postives = 158/224 (70.54%), Query Frame = 1 Query: 1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672 C + G +Q A FW LG+GEP+ +SG+HG G+ D++D V +HL D T E + NVAIVGRPNVGKSSLLN GE R+IVS + GTTRD+ID + ER G+TYRL+DTAGIR+K + V+YG EFF +NRAFKAIRRADVVLL++D G T+QD+ LA R+ +GRACV+V NKWD VE K+ + N+ + L ++WAE F SA TGQR K+ Sbjct: 122 CESPEQGTIQAAQFWELGIGEPFPVSGIHGSGVGDLLDEVVQHLPPTDDTEEIRET-NVAIVGRPNVGKSSLLNAFLGENRAIVSPISGTTRDAIDTVVERDGKTYRLIDTAGIRKK---KGVEYGPEFFGINRAFKAIRRADVVLLVIDALDGATEQDQKLAGRIAEEGRACVIVVNKWDAVE-KDSYTLNEYERQLKNRLYFLEWAETIFVSALTGQRVAKI 340 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16276.4287.1 >prot_L-elsbetiae_contig16276.4287.1 ID=prot_L-elsbetiae_contig16276.4287.1|Name=mRNA_L-elsbetiae_contig16276.4287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=224bp CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTback to top mRNA from alignment at L-elsbetiae_contig16276:299..3804+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16276.4287.1 ID=mRNA_L-elsbetiae_contig16276.4287.1|Name=mRNA_L-elsbetiae_contig16276.4287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3506bp|location=Sequence derived from alignment at L-elsbetiae_contig16276:299..3804+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16276:299..3804+ >mRNA_L-elsbetiae_contig16276.4287.1 ID=mRNA_L-elsbetiae_contig16276.4287.1|Name=mRNA_L-elsbetiae_contig16276.4287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1344bp|location=Sequence derived from alignment at L-elsbetiae_contig16276:299..3804+ (Laminarionema elsbetiae ELsaHSoW15)back to top |