mRNA_L-elsbetiae_contig1627.4283.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Match: A0A6H5JU40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU40_9PHAE) HSP 1 Score: 117 bits (292), Expect = 5.500e-24 Identity = 120/389 (30.85%), Postives = 170/389 (43.70%), Query Frame = 2 Query: 911 ARHGAVLNDALQHATIHSKLKVVVALLEAGADPNEANFEGCTPMLTAAESWPSEEVLRALLRHGAQIDVTDNFGRTPLHIAASEGAWGWRK*RHPIDFFVEEAGAAALGWRDQDGSTPLHVAC---AHENDDAITTLVSLGAEITAQXXXXXXXXXXAVSSKRAVDILMRAXXXXXXXXXXXXXXXXXXXS----NRSGAVVAALLKHDSTIVNVRNIDGDTPLYAAXXXXXXXXXSGFVLRRTPAWTIVDMLLRAGANESIANNDGRTAFYAPIQKCIANGRSSPCGATMRVCAVLFVAPADRAWRRRGLLLLCRAFSEVAQLEPKKSRDKFARVSQGDDAADDDGGGRRV---AKGGRGCAGDFTSLVARLFDLPERGIFRKIICFL 2047 A H + L AL HA +KL + L+ +GAD N + P+ A E+ E VL AL+RHGA D+ GR PL AA G + + PL A ++ ++D L+ GA++ + AV V +L++A + + S VV LL H + VN+++ +G + L+ F R +VD+LLR GA+E+I N D T K S P V +L APADRAWRRRG +LLC + +L P ++R K RV+ GD AA GG V A + DF+SL+ARLFD P+ G+FRKI+C+L Sbjct: 74 ATHNSRLLTALHHAAAGTKLDAMEFLVGSGADANGGALKW-RPIHFATEANSPEAVL-ALVRHGADPHAEDSLGRPPLCCAADRGN---------MXXXXXXXXXXXXXXXXHEVCPPLLFAVLSRSNNSEDMTRALLQHGADVN-ELDDYEIAINEAVRCGNVVKLLLKAGALVDGHNDFHGLVLAPLHAACNFSLSCDVVKVLLGHGAN-VNLQDSEGTSALHLTAVR--------FSSR------LVDLLLRHGADETINNGDSSTPADCARLKAGHQEASRP------VLRLLGGAPADRAWRRRGRVLLCSTPPQQKRLGPGETRTKMTRVTAGDGAAAR-GGTSEVGSDAHSNSNGSSDFSSLMARLFDRPQ-GVFRKIVCYL 427
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 5.950e-15 Identity = 93/321 (28.97%), Postives = 118/321 (36.76%), Query Frame = 2 Query: 977 VVALLEAGADPNEANFEGCTPMLTAAESWPSEEVLRALLRHGAQIDVTDNFGRTPLHIAASEGAWG------------------WRK*RHPIDFFVEEAGAAALGW---------RDQDGSTPLHVACAHENDDAITTLVSLGAEITAQXXXXXXXXXXAVSSKRAVDILMRAXXXXXXXXXXXXXXXXXXXSNRSGAVVAALLKHDSTIVNVRNIDGDTPLYAAXXXXXXXXXSGFVLRRTPAWTIVDMLLRAGANESIANNDGRTA-----FYAPIQKCIANGRSSPCGATMRVCAVLFVAPADRAWRRRGLLLLCRAF 1843 V +LL D ++ L + S E + LL GA+ + D GRTPLH+A G W + +DF ++ A L R DG T LHVA + AI LV GA + + A S N AL KH + I R++ G+TPL A R IVDMLLR GA+E+ N DGRTA + C N + RV +L APADRAWRRRGLL+LCRAF Sbjct: 77 VASLLSESVDSSD--------QLHVSASQGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACS-------------------------------NHCHEAALALFKHGANI-EARDMRGETPLIIAARQAG----------RQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLE-----RVRDLLENAPADRAWRRRGLLVLCRAF 342
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 1.110e-13 Identity = 100/345 (28.99%), Postives = 125/345 (36.23%), Query Frame = 2 Query: 1043 LTAAESWPSEEVLRALLRHGAQIDVTDNFGRTPLHIAASEGAWG------------------WRK*RHPIDFFVEEAGAAALGW---------RDQDGSTPLHVACAHENDDAITTLVSLGAEITAQXXXXXXXXXXAVSSKRAVDILMRAXXXXXXXXXXXXXXXXXXXSNRSGAVVAALLKHDSTIVNVRNIDGDTPLYAAXXXXXXXXXSGFVLRRTPAWTIVDMLLRAGANESIANNDGRTA-----FYAPIQKCIANGRSSPCGATMRVCAVLFVAPADRAWRRRGLLLLCRAF-----------SEVAQLEPK-KSRDKFARVS-QGDDAADDDGGGRR 1942 L A S E + LL GA+ + D GRTPLH+A G W + +D ++ A L R DG T LHVA + AI LV GA + + A N AL KH S I R+I G+TPL A R IVDMLLR GA+E+ N DGRTA + C N + RV +L AP DRAWRRRG L+LCRAF S + P+ +S AR+S G + +DD GRR Sbjct: 42 LHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACI-------------------------------NHCHEAALALYKHGSNI-EARDIRGETPLIIAARQAG----------RQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQD-----VERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRSLSTGARISGAGGELREDDDKGRR 339
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Match: A0A6H5IHW9_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IHW9_9HYME) HSP 1 Score: 73.2 bits (178), Expect = 2.580e-9 Identity = 99/370 (26.76%), Postives = 146/370 (39.46%), Query Frame = 2 Query: 353 DRLACRLLELGASPTVKHR-IFG-APIHAA--VGKEDILRLLLSNDSADKDEL-DHEGNSPLFLAVREGHVPSVKFLLTAGADSGL-----------------RVEADLDYLYD--------------DAEDTDGWAALDLAASAGRADLCKLLVEAGANVNATSKRCSRTPLHAAAGSNQVGAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGAVLNDALQHA--------TIHSKLKVVVALLEAGADPN-EANFEGCTPMLTAAESW---PSEEVLRALLRHG-AQIDVTDNFGRTPLHIAASEGAWGWRK*RHPIDFFVEEAGAAALGWRDQDGSTPLHVACAHENDDAITTLV 1315 D+ +L E+ V +R + G H A G D++R L D +EL G+SPL+ A+ G+ K LL AGAD + + +D+L DA D G A L A +G A +LLV+ GA+ N++ R S TPLH A+ SN+ +++ R V DA+ + KV LL+ GADPN + N G T + + E+VL +L G +I+ D+ G+TPLH+A + G R I + GA D DGSTPLH+ C +D +T ++ Sbjct: 156 DKSVSKLFEIYDRYDVNYRDVIGYTHFHVACLAGCADVVRKFLELGRVDPNELVPRSGDSPLYAALEHGYQDVAKLLLEAGADPNFVHCKHGATPLHIIISMEKQKTSIDFLEMFFAICRAKGHGVDIDALDAKGLAPLHYALISGHARATELLVDNGADPNSSGPRGS-TPLHLASWSNRHHSVEALLEACEK-----------------------------RRRGVDVDAVDXXXXXXXXXXVCRGRKKVASGLLKWGADPNSQYNELGETALHVVCADYLEDDMEDVLYDILESGRCRINAVDSLGKTPLHVALAGG-------RQNIVHALLVHGADP-NQPDSDGSTPLHMVCQKRLEDGLTGML 487
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Match: I1I9S2_BRADI (Uncharacterized protein n=4 Tax=Brachypodium distachyon TaxID=15368 RepID=I1I9S2_BRADI) HSP 1 Score: 71.2 bits (173), Expect = 3.720e-9 Identity = 78/273 (28.57%), Postives = 115/273 (42.12%), Query Frame = 2 Query: 398 VKHRIFGAPI--HAAVGKE-DILRLLLSNDSADKDELDHEGNSPLFLAVREGHVPSVKFLLTAGADSGLRVEADLDYLYDDAEDTDGWAALDLAASAGRADLCKLLVEAGANVNATSKRCSRTPLHAAAGSNQVGAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGAVLNDALQHATIHSK-----------------LKVVVALLEAGADPNEANFEGCTPMLTAAESWPSEEVLRALLRHGAQIDVTDNFGRTPLHIAA 1156 VKH FG + AA+G+ + R L+ + D D++ G +PL A+ +V V++LL AD+ E DG L +AA+ G+ ++ ++L+ GA+++A S T LHAAA RH V+ L H H+K LK V LLEAGAD N FE TP++ AA ++ +L+ L+ GA +V D+FGRTP+ IAA Sbjct: 75 VKHSSFGIGVLHFAALGRSLPMCRYLVEDLRMDVDDICPAGETPLTFAIGFENVDVVRYLLNHDADTEKLNE-------------DGLTPLYVAAAIGQCEIVEVLLSKGAHIDALST--GETALHAAA--------------------------------------------HGRHDNVVKILLDHCADHNKINFGDCTPLVCAIDARSLKCVKLLLEAGADVNCVGFE--TPLIVAAGIGLTD-ILKCLVLAGADPNVHDSFGRTPVEIAA 285
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Match: A0A6H5K4P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P5_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 4.610e-9 Identity = 89/337 (26.41%), Postives = 133/337 (39.47%), Query Frame = 2 Query: 911 ARHGAVLN---------DALQHATIHSKLKVVVALLEAGADPNEANFEGCTPMLTAAESWPSEEVLRALLRHGAQIDVTDNFG----RTPLHIAASEGAWGWRK*RHPIDFFVEEAGAAALGWRDQDGSTPLHVACAH--------------ENDDAITTLVSLGAEITAQXXXXXXXXXXAVSSKRAVDILMRAXXXXXXXXXXXXXXXXXXXSNRSGAVVAALLKHDSTIVNVRNIDGDTPLYAAXXXXXXXXXSGFVLRRTPAWTIVDMLLRAGANESIANNDGRTAFYAPIQKCIANGRSSPCGATMRVCAVLFVAPADRAWRRRGLLLLCRA 1840 A HGA+ + AL +A L++ + GADP + +G TP+ AA ++ ++ + LLR GAQ++ +N G R+PL A + A + + E GA L DQ G T LH A EN I TL+ ++ A R+V+ + V A L + N + DG TPL+ + +W VD+LLR GA+E+ +N+G Y P + + GRS+ A ++ L AP DRAWRR G L++CRA Sbjct: 79 ALHGALADVGLLDAKGRSALHYAIEGGHLQLAGDAVIGGADPKAKDIDGNTPLHFAA-AYDDDKFVGTLLRRGAQVNAANNEGNLNERSPLFFAHDQAA---------MTRTLLEYGADILSV-DQLGFTALHAAAVEVFGYFSPRLLMWNAENAKVIDTLLEARVDLEA----------------RSVEFFEGSQRFRGLTPLHLAAYHQK--------VSMAELSRKGAVDNAKCDDGRTPLHMLCTNP-----------KLNSWDTVDLLLRWGADETAIDNEG----YTP--EALVVGRSNRSRALRQM---LDKAPEDRAWRRWGTLVMCRA 360
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Match: A0A6H5IYD1_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IYD1_9HYME) HSP 1 Score: 71.6 bits (174), Expect = 9.470e-9 Identity = 43/128 (33.59%), Postives = 61/128 (47.66%), Query Frame = 2 Query: 932 NDALQHATIHSKLKVVVALLEAGADPNEANFEGCTPMLTAAESWPSEEVLRALLR------HGAQIDVTDNFGRTPLHIAASEGAWGWRK*RHPIDFFVEEAGAAALGWRDQDGSTPLHVACAHENDD 1297 N L A H+ K LL GADPN N +GCT + + ++ + L ++DV DN G TPLH+A WG ++ + + E GA + ++DG+TPLHV C E DD Sbjct: 781 NTLLHWAMRHAYKKTSELLLRRGADPNSTNADGCTALHVVCRFYYEYDLTKMLFELSNDEYQPVRLDVRDNLGNTPLHVALE---WGGKE----VPLMLLERGAD-INLANEDGATPLHVICESEFDD 900
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Match: A0A6H5IDX7_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IDX7_9HYME) HSP 1 Score: 70.5 bits (171), Expect = 2.270e-8 Identity = 82/309 (26.54%), Postives = 117/309 (37.86%), Query Frame = 2 Query: 491 DELDHEGNSPLFLAVREGHVPSVKFLLTAGADSGLRVEADLDYLY-------DDAE------------------------DTDGWAALDLAASAGRAD---LCKLLVEAGANVNATSKRCSRTPLHAAAGSNQVGAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGAVLNDALQHATIHSKLKVVVALLEAGADPNEANFEGCTPMLTAAESWPSEEVLRALLRHG------AQIDVTDNFGRTPLHIAASEGAWGWRK*RHPIDFFVEEAGAAALGWRDQDGSTPLHVACAHENDD 1297 D D GN+PL LA R H S++ LL GAD L EA L+ DD E D AL + GR+D + +LL+ AGA+ N + + TPLH S+ L+ AL+H + ++V LL GADPN AN +G TP+ +S + +LR+ L QID+ DN G PLH+A + G+++ ++ + A + GSTPLH C + DD Sbjct: 610 DARDRFGNTPLHLAARSHHRRSIELLLRRGADPSLVNEAGWTLLHQVCWWHRDDVELLEWLLELGDEEQRAVLRVNARTTDESRNTALHMVLRCGRSDNRRMAELLLRAGADPNLANAK-GATPLHVIGESSY--------------NRNNNLARLFFDVNDESRRTVRIDARDEMGNTPLHLALRHMRDGHE-EMVELLLRRGADPNAANADGSTPLHVICQSDENSSLLRSFLNVNDELEKTVQIDIRDNEGNRPLHLAVRSTSDGYKE---TVELLLRRG--ADPDAANAVGSTPLHFICKRDCDD 897
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Match: A0A6I8N544_ORNAN (Euchromatic histone lysine methyltransferase 2 n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8N544_ORNAN) HSP 1 Score: 67.0 bits (162), Expect = 2.100e-7 Identity = 79/308 (25.65%), Postives = 120/308 (38.96%), Query Frame = 2 Query: 425 IHAAVGKEDILRLLLSNDSADKDELDHEGNSPLFLAVREGHVPSVKFLLTAGADSGLRVEADLDYLYDDAEDTDGWAALDLAASAGRADLCKLLVEAGANVNATSKRCSRTPLHAAAGSNQVGAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGAVLND-----ALQHATIHSKLKVVVALLEAG-ADPNEANFEGCTPMLTAAESWPSEEVLRALLRHGAQIDVTDNFGRTPLHIAASEGAWGWRK*RHPIDFFVEEAGAAALGWRDQDGSTPLHVACAHENDDAITTLVSLGAE 1330 + A G+E + + L+ +S + +L L+L+V++G + V +L D + ++ L AA G ++C +L++AGAN+NA K RTPL A +N V A R G V + L HA L++V LL G D N + G TP++ AAE EV+R LL GA + +TDN LH A+ G+ + V L + G TPLH+A D + +S GA+ Sbjct: 370 LEAGPGREALEKALVVQESERRKKLRFHPRQ-LYLSVKQGELQKVVLMLLDNLDPNFQ-----------SDQQSKRTPLHAAAQKGSLEICHVLLQAGANINAVDK-LQRTPLMEAVVNNHVEAA---------------------------------RYMVQRGGCVFSKEDGSTCLHHAAKSGNLEMVSLLLGTGQVDVNAQDNGGWTPIIWAAEH-KHIEVIRLLLTRGADVTLTDNEENICLHWASFTGSAAIAE--------VLLNARCDLHAVNYHGDTPLHIAARESYHDCVLLFLSRGAD 622
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Match: A0A6I8NT05_ORNAN (Euchromatic histone lysine methyltransferase 2 n=2 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8NT05_ORNAN) HSP 1 Score: 67.0 bits (162), Expect = 2.120e-7 Identity = 79/308 (25.65%), Postives = 120/308 (38.96%), Query Frame = 2 Query: 425 IHAAVGKEDILRLLLSNDSADKDELDHEGNSPLFLAVREGHVPSVKFLLTAGADSGLRVEADLDYLYDDAEDTDGWAALDLAASAGRADLCKLLVEAGANVNATSKRCSRTPLHAAAGSNQVGAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGAVLNDA-----LQHATIHSKLKVVVALLEAG-ADPNEANFEGCTPMLTAAESWPSEEVLRALLRHGAQIDVTDNFGRTPLHIAASEGAWGWRK*RHPIDFFVEEAGAAALGWRDQDGSTPLHVACAHENDDAITTLVSLGAE 1330 + A G+E + + L+ +S + +L L+L+V++G + V +L D + ++ L AA G ++C +L++AGAN+NA K RTPL A +N V A R G V + L HA L++V LL G D N + G TP++ AAE EV+R LL GA + +TDN LH A+ G+ + V L + G TPLH+A D + +S GA+ Sbjct: 377 LEAGPGREALEKALVVQESERRKKLRFHPRQ-LYLSVKQGELQKVVLMLLDNLDPNFQ-----------SDQQSKRTPLHAAAQKGSLEICHVLLQAGANINAVDK-LQRTPLMEAVVNNHVEAA---------------------------------RYMVQRGGCVFSKVDGSTCLHHAAKSGNLEMVSLLLGTGQVDVNAQDNGGWTPIIWAAEH-KHIEVIRLLLTRGADVTLTDNEENICLHWASFTGSAAIAE--------VLLNARCDLHAVNYHGDTPLHIAARESYHDCVLLFLSRGAD 629 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1627.4283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1627.4283.1 >prot_L-elsbetiae_contig1627.4283.1 ID=prot_L-elsbetiae_contig1627.4283.1|Name=mRNA_L-elsbetiae_contig1627.4283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp MRAGAHAGALNNVGSTALHLACSNRSGAVVAALLKHDSTIVNVRNIDGDTback to top mRNA from alignment at L-elsbetiae_contig1627:7599..11520- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1627.4283.1 ID=mRNA_L-elsbetiae_contig1627.4283.1|Name=mRNA_L-elsbetiae_contig1627.4283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3922bp|location=Sequence derived from alignment at L-elsbetiae_contig1627:7599..11520- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1627:7599..11520- >mRNA_L-elsbetiae_contig1627.4283.1 ID=mRNA_L-elsbetiae_contig1627.4283.1|Name=mRNA_L-elsbetiae_contig1627.4283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig1627:7599..11520- (Laminarionema elsbetiae ELsaHSoW15)back to top |