mRNA_L-elsbetiae_contig162.4252.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig162.4252.1
Unique NamemRNA_L-elsbetiae_contig162.4252.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Match: D8LID9_ECTSI (Proteasome subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LID9_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 8.110e-109
Identity = 160/169 (94.67%), Postives = 164/169 (97.04%), Query Frame = 1 
Query:    1 RYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGDKELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIELEGNAAQPMDEGGVAEEKAPAPDAGMA 507
            +YVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEK+FE+FENCDLDELVKHALKALSGCVTGDKELDA G TLAIVGKDKVFESLEG+QLQPYMDAIELEGNAAQPMDEG   EEKAPAPDAGMA
Sbjct:   96 KYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEDFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEGNAAQPMDEGD-GEEKAPAPDAGMA 263
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BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Match: A0A836CE23_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE23_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.540e-71
Identity = 109/163 (66.87%), Postives = 133/163 (81.60%), Query Frame = 1 
Query:    1 RYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGDKELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIELEGNAAQPMDEGGVAEEKAPA 489
            +YVYGT +QA+RL  DLADMHQR TQSYVRRPYGVGML+AAHD TGPHL +T PSGNYFEYVAMAIGARSQSAKTYLEK++++F    +D+L+KH LKALSGC+TGDKELD    ++AIVG  + FE ++G +LQ ++DAIE+EG+AA P   G   E +APA
Sbjct:   96 KYVYGTQLQANRLATDLADMHQRCTQSYVRRPYGVGMLIAAHDATGPHLMETSPSGNYFEYVAMAIGARSQSAKTYLEKHYQDFPAASVDDLIKHGLKALSGCITGDKELDVASVSVAIVGAGQAFEEVQGARLQAFLDAIEVEGDAAAPAPAG---EPEAPA 255
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BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Match: A0A7S2XQH4_9STRA (Proteasome subunit alpha type n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQH4_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.480e-63
Identity = 96/146 (65.75%), Postives = 120/146 (82.19%), Query Frame = 1 
Query:    1 RYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQ-TGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGDKELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIELEG 435
            +YVYGT M +SRLV DLAD HQRTTQ+YVRRPYGVG+LVA++D+ TGPHL+QTCPSGN +EY A AIGARSQS +TYLEK++E FE    D+L+ HAL+AL+GCVTGD EL     ++A+VGK + F  +EGD+LQPY+D +ELEG
Sbjct:   96 KYVYGTPMPSSRLVTDLADRHQRTTQTYVRRPYGVGLLVASYDEKTGPHLYQTCPSGNIYEYYASAIGARSQSGRTYLEKHYESFEEASKDDLIMHALRALAGCVTGDGELTRDNGSIAVVGKGESFILIEGDELQPYLDRLELEG 241
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BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Match: A0A6U3ZK57_9STRA (Proteasome subunit alpha type n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZK57_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.180e-62
Identity = 94/145 (64.83%), Postives = 117/145 (80.69%), Query Frame = 1 
Query:    1 RYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGDKELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIELEG 435
            +YVYGT + + RLV DLAD HQRTTQSYVRRPYGVG+LVA+ D+ GPH++QTCPSGN +E  A AIGARSQS +TYLEK+ E FE C  D+L+ HALKAL GCV+GD EL  +  ++AIVGKD+ F  +EG++LQPY+D +ELEG
Sbjct:   96 KYVYGTALPSGRLVTDLADRHQRTTQSYVRRPYGVGLLVASFDKNGPHVYQTCPSGNVYECYATAIGARSQSGRTYLEKHCESFEECSKDDLIMHALKALVGCVSGDGELTRENGSVAIVGKDQKFTLIEGEELQPYLDRLELEG 240
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BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Match: A0A6S9F1R3_9STRA (Proteasome subunit alpha type n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9F1R3_9STRA)

HSP 1 Score: 202 bits (513), Expect = 3.310e-62
Identity = 91/145 (62.76%), Postives = 118/145 (81.38%), Query Frame = 1 
Query:    1 RYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGDKELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIELEG 435
            +YVYGT M + RL+ DLAD HQRTTQ+YVRRPYGVG+LVA++D+ GPHL+QTCPSGN +EY A AIGARSQS +TYLEK++E   +   D+L+ HAL+AL+GCV+GD EL     ++A+VGKD+ F  +EGD+LQPY+D +ELEG
Sbjct:   96 KYVYGTPMPSGRLLTDLADKHQRTTQTYVRRPYGVGLLVASYDKNGPHLYQTCPSGNLYEYYASAIGARSQSGRTYLEKHYETLNDASRDDLIMHALRALTGCVSGDVELTKDNGSIAVVGKDEKFTLIEGDELQPYLDRLELEG 240
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BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Match: A0A7S2RSW0_9STRA (Proteasome subunit alpha type n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RSW0_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.800e-62
Identity = 91/145 (62.76%), Postives = 119/145 (82.07%), Query Frame = 1 
Query:    1 RYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGDKELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIELEG 435
            +YVYGT+M + RLV DLAD HQRTTQ+YVRRPYGVG+LVA++D++GPHL+QTCPSGN +EY A AIGARSQS +TYLEK ++   +   D+L+ HAL+A+SGCV+GD EL  +  ++A+VGKD  F  +EGD+LQPY+D +ELEG
Sbjct:   96 KYVYGTSMPSGRLVTDLADRHQRTTQTYVRRPYGVGLLVASYDKSGPHLYQTCPSGNLYEYYASAIGARSQSGRTYLEKIYDNVADASRDDLIMHALRAISGCVSGDGELTRENGSIAVVGKDDKFTLIEGDELQPYLDRLELEG 240
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BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Match: A0A7S3GRX0_9STRA (Proteasome subunit alpha type n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRX0_9STRA)

HSP 1 Score: 201 bits (511), Expect = 3.850e-62
Identity = 92/153 (60.13%), Postives = 121/153 (79.08%), Query Frame = 1 
Query:    1 RYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGDKELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIELEGNAAQPMDE 459
            +YVYGT +Q SRLVLDLADMHQ+ TQSYVRRPYGVG+LV  +DQTGPHL+ T PSGNY+EY AMAIG+RSQ+++TYLEK FE F N  LD+L+KHALKAL+  + GD ELD++  ++++VG ++ F+ +EG  LQ Y+DA+ +EG      +E
Sbjct:   96 KYVYGTPIQGSRLVLDLADMHQKCTQSYVRRPYGVGLLVGTYDQTGPHLYLTEPSGNYYEYYAMAIGSRSQTSRTYLEKEFESFGNASLDDLIKHALKALAASLAGDSELDSKNASISMVGANQAFQIIEGPALQKYLDAVAVEGEQEMEQEE 248
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BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Match: A0A4D9CTI6_9STRA (Proteasome subunit alpha type n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTI6_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.580e-61
Identity = 96/146 (65.75%), Postives = 119/146 (81.51%), Query Frame = 1 
Query:    1 RYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGDKELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIELEGN 438
            +YVYG+ +QASRLVLD+AD HQR TQSYVRRPYGVG+L+A++DQTGPHL+QT PSG Y+EY+A AIG+R+QS KTYLEK   EFE+   DEL+KHALKALSG   GDKEL     ++A+VGKD   E +EG+ LQ Y+DAIE+EG+
Sbjct:   96 KYVYGSALQASRLVLDVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLYQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYHAEFESLGQDELIKHALKALSG-TAGDKELSKDNASVAVVGKDHPLEIIEGEALQRYLDAIEVEGD 240
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BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Match: W7TFX4_9STRA (Proteasome subunit alpha n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFX4_9STRA)

HSP 1 Score: 201 bits (511), Expect = 8.300e-61
Identity = 98/160 (61.25%), Postives = 126/160 (78.75%), Query Frame = 1 
Query:    1 RYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGDKELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIELEGNAAQP-MDEGGVAEE 477
            +YVYG+ +QASRLV+D+AD HQR TQSYVRRPYGVG+L+A++DQTGPHL+QT PSG Y+EY+A AIG+R+QS KTYLEK   EFE+   DEL+KHALKALSG   GDKEL     ++A+VGKD   E +EG+ LQ Y+DAIE+EG+     +D G +++E
Sbjct:   96 KYVYGSALQASRLVVDVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLYQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYHAEFESLGQDELIKHALKALSG-TAGDKELSKDNASVAVVGKDHPLEIIEGEALQRYLDAIEVEGDTGDTCLDYGSISQE 254
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BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Match: A0A1V9Z6U9_9STRA (Proteasome subunit alpha type n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6U9_9STRA)

HSP 1 Score: 196 bits (498), Expect = 2.900e-60
Identity = 88/143 (61.54%), Postives = 115/143 (80.42%), Query Frame = 1 
Query:    1 RYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGDKELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIEL 429
            ++VYG+ M  +RLV D+AD  Q  TQSYVRRPYGVG+LVA  D+TGPHLFQTCPSGNY+EY A+AIGARSQSA+TYLEK+F+ F NCD +EL+KHAL+ + GC+ GD+EL      +A+VG ++ F  +EG +LQPY+DA+E+
Sbjct:   97 KFVYGSAMSVARLVADVADKKQECTQSYVRRPYGVGLLVAGVDKTGPHLFQTCPSGNYYEYNAIAIGARSQSARTYLEKHFQTFANCDKEELIKHALEGIRGCLEGDQELSIANIAVAVVGLNEAFHVIEGTKLQPYIDAVEV 239
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig162.4252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LID9_ECTSI8.110e-10994.67Proteasome subunit alpha type n=2 Tax=Ectocarpus T... [more]
A0A836CE23_9STRA1.540e-7166.87Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
A0A7S2XQH4_9STRA2.480e-6365.75Proteasome subunit alpha type n=1 Tax=Attheya sept... [more]
A0A6U3ZK57_9STRA1.180e-6264.83Proteasome subunit alpha type n=1 Tax=Skeletonema ... [more]
A0A6S9F1R3_9STRA3.310e-6262.76Proteasome subunit alpha type n=1 Tax=Ditylum brig... [more]
A0A7S2RSW0_9STRA3.800e-6262.76Proteasome subunit alpha type n=1 Tax=Eucampia ant... [more]
A0A7S3GRX0_9STRA3.850e-6260.13Proteasome subunit alpha type n=1 Tax=Spumella elo... [more]
A0A4D9CTI6_9STRA1.580e-6165.75Proteasome subunit alpha type n=1 Tax=Nannochlorop... [more]
W7TFX4_9STRA8.300e-6161.25Proteasome subunit alpha n=1 Tax=Nannochloropsis g... [more]
A0A1V9Z6U9_9STRA2.900e-6061.54Proteasome subunit alpha type n=1 Tax=Thraustothec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig162contigL-elsbetiae_contig162:138..5302 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score308.1
Seed ortholog evalue2.4e-81
Seed eggNOG ortholog2880.D8LID9
Preferred namePSMA1
KEGG koko:K02725,ko:K13141
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000502,GO:0001530,GO:0001673,GO:0001703,GO:0002682,GO:0002683,GO:0002861,GO:0002862,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005839,GO:0005844,GO:0005856,GO:0005886,GO:0005911,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0006997,GO:0007088,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007290,GO:0007291,GO:0007346,GO:0007349,GO:0007369,GO:0007370,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009057,GO:0009506,GO:0009653,GO:0009790,GO:0009896,GO:0009987,GO:0010004,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0030054,GO:0030071,GO:0030154,GO:0030163,GO:0031331,GO:0031347,GO:0031348,GO:0031597,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0036211,GO:0042175,GO:0042221,GO:0043073,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046685,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0048598,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050727,GO:0050728,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051704,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0055044,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0071944,GO:0080134,GO:0090068,GO:0097159,GO:0097367,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990904,GO:2001252
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0863@2759
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03041,ko03051,ko04147
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-18_004030.1
Exons4
Model size510
Cds size489
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig162.4252.1prot_L-elsbetiae_contig162.4252.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig162 159..5302 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815669.2366722-UTR-L-elsbetiae_contig162:137..1581622815669.2366722-UTR-L-elsbetiae_contig162:137..158Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig162 138..158 +
1691683026.7499418-UTR-L-elsbetiae_contig162:137..1581691683026.7499418-UTR-L-elsbetiae_contig162:137..158Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig162 138..158 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815669.251304-CDS-L-elsbetiae_contig162:158..3921622815669.251304-CDS-L-elsbetiae_contig162:158..392Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig162 159..392 +
1691683026.760758-CDS-L-elsbetiae_contig162:158..3921691683026.760758-CDS-L-elsbetiae_contig162:158..392Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig162 159..392 +
1622815669.2621484-CDS-L-elsbetiae_contig162:1389..15001622815669.2621484-CDS-L-elsbetiae_contig162:1389..1500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig162 1390..1500 +
1691683026.7705982-CDS-L-elsbetiae_contig162:1389..15001691683026.7705982-CDS-L-elsbetiae_contig162:1389..1500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig162 1390..1500 +
1622815669.273669-CDS-L-elsbetiae_contig162:3467..35811622815669.273669-CDS-L-elsbetiae_contig162:3467..3581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig162 3468..3581 +
1691683026.7840564-CDS-L-elsbetiae_contig162:3467..35811691683026.7840564-CDS-L-elsbetiae_contig162:3467..3581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig162 3468..3581 +
1622815669.2834847-CDS-L-elsbetiae_contig162:5272..53021622815669.2834847-CDS-L-elsbetiae_contig162:5272..5302Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig162 5273..5302 +
1691683026.7980752-CDS-L-elsbetiae_contig162:5272..53021691683026.7980752-CDS-L-elsbetiae_contig162:5272..5302Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig162 5273..5302 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig162.4252.1

>prot_L-elsbetiae_contig162.4252.1 ID=prot_L-elsbetiae_contig162.4252.1|Name=mRNA_L-elsbetiae_contig162.4252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp
MQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGN
YFEYVAMAIGARSQSAKTYLEKNFEEFENCDLDELVKHALKALSGCVTGD
KELDAQGCTLAIVGKDKVFESLEGDQLQPYMDAIELEGNAAQPMDEGGVA
EEKAPAPDAGMA*
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mRNA from alignment at L-elsbetiae_contig162:138..5302+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig162.4252.1 ID=mRNA_L-elsbetiae_contig162.4252.1|Name=mRNA_L-elsbetiae_contig162.4252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5165bp|location=Sequence derived from alignment at L-elsbetiae_contig162:138..5302+ (Laminarionema elsbetiae ELsaHSoW15)
AGGTACGTGTACGGTACCACTATGCAGGCGAGTCGCCTGGTGCTAGACCT
CGCGGACATGCACCAAAGGACCACCCAGAGCTACGTCCGGCGGCCGTACG
GCGTGGGGATGCTCGTGGCCGCGCATGATCAGACGGGGCCCCACCTGTTC
CAGACCTGTCCCAGCGGCAACTATTTCGAGTACGTGGCCATGGCCATCGG
CGCGCGATCGCAGTCGGCCAAGACCTACCTCGAGAAGAACTTCGAGGAGT
TCGAGGTGAGCAGGCAGGCGAACAACCGCTCGCTCAGGGTACTGCTGTTT
CACAGAGTCTGAGAGAGCGCGCGCGCGGTTGGACGCGGCGGGGGGGGGGT
AGGTTTCACGGTACACCGGGGCGTGGTCGAAATATGTAGCAGTTTCTTTA
GGTCCCGTTTTCCGGATGCCTGTGTATCGGTACACAGTAGTGTTGTCTTC
AAGGCGGCTATTTTTGGGCCAAAGCGTTGCTCGTGAATGCAACCAACGGG
GGGGGTACGCCGGTGTGAGTGAGCTCTGTGGCAGCCTTGCTTTTCAAGAA
GCTGCCGCTGCCGCTGGTGCTGGTGCTGCTGCTTTGTTCAAGCTGTTGAA
AAAGGTCGCTCTGTGCGGACCTGTCGACCAGCCGGCTTTCCTATGCAAAT
CCGCCGAGGTGTAGTGGCGCGCACGCCCAGGGTGCGGGCGATGTAATCCA
AGCGTCTCTCTTCGTATACATTTATACTGTGCTAAATTGTGTTCTCTCCT
TTGCTACACGCCGTTTCGATCGCCAACGTTCTCACCACCCACTTCTCTCG
CATGTCGCACGTTTTTTCATCCACCAAATCCGCAAAAAAACTCGAAAACC
AAACGAGTTTTTTTTCACAGGTTTAGACGTACGTAGACCGCTGGCATTTG
GAGACAGATATGTTGAAAATTAAAACGAACCAACGAACCCAATTTCTATG
ATGCCTCTACATAGAGCAAAAGCGTTGACAAAGTTGCGAGGGCTTTGGCA
AAGTAGCCCGCACAAGCTCTTCTTGAGCTCCAACGAACCCAGTTTCTTTG
ATGCCTGAAGCAAATGCGTTGCCAAAGTTGCGAGGGCTTTGGCAAAGTAG
CCCGTACGGGATTTCTTGAGCTTCATCGCGAGCGGTAAACCCGTGGTCTC
GTCAATGATATCGGTTCTCTGGGCTCTGGTTCGTTCCGCGTCCCGCGTTC
CGTCCCCCTTGCTCTCTTCTTTCTATGCGGCCGTTCGTACGTATTTGCGC
AGAACTGCGACCTGGACGAGTTGGTGAAGCACGCCTTGAAGGCGTTATCT
GGCTGCGTGACCGGGGACAAGGAGCTCGACGCGCAGGGATGTACCCTCGC
CATCGTCGGCAAGGTAGGCATGCTTTCTGAGAGAATGAATATGATGCAGT
TGGGCTGTATATAATACAAGGATATTTCATTCTTAGCGAAAAATTCTCAA
CATCCAGTTGTATGTATGCAGCGGTACGTTATCCACGCCAAAAACAACGT
GTGTATTTTATTAGGTGTGGAGATGTTGTTGTTGTCTTCACTTTCAAAAC
CGTTCCGATCTCTCTATCCAGTACACCTCCATGAGTCCCTGTACTAATCC
AACCCTGACGCGGTCATTTCCCGTGGTAACAGGATAACTTATCCTAAAAG
GGCAGAGACTACTGAAAATATAAAAATAAAATAAAATGGACCCGAGGAGC
CCACAAAGCACAAAACAAAGTATCAGATACATAAAGTTTGGAGCCTTCCG
CCCCCCTCTACACGCTATATATGCTAGGTGAAAAACAAAAGTGGACAAGC
CAGCATCACCAACCGCGGGGGGATACGCCCCCTGGTTCTATCTTGGTTCC
CCAAACAATGCCGGGATGTTCCGCGCCGGGTTCTCGCCGGCCAGGCCACC
GATCTACATAGTCCTCCCCATCCTTCGTACCGCACCCATGATACACTAAG
AGGGACAGGACATAGGACAATAAAACAAGCCGAAAGTACGAAAATACAAA
CATTAGGTGTGGGGATGGCACTGGTGAAAAAAAGGCATATTTATAGCTTG
TTTGGCTGCTGCTTTGCAAATGGTTTTGGGTCAAATGCGTTAACCCTTTT
AGTACGGAAGGTCCCTGAGAACCAAAGTTATCGGACCAAAATTATCGAAC
TGTTCTAGATGCCCGCTGATTGGTCGAGAAGGACAGTCCCTGCGCAAGAC
ACCTGCAAAGACCAGCTGCAGGGCCCCACATCATTTTGGCGACACTTCCT
ATACTAAATAGCAGTCAAACTCTGTGAAACGTTTGGCGACACTTTCAATA
CTCAACCCAAGTCGAACCTTTTTGGCGTACCAGACAATACAGAGTTCTTT
GTCTCAGAGACATGGGATGAACCCTAGGCTGTGCACGCGCAGCAGCCCTC
ACAACGCATAATGCATCGTGGCGAGCGAAGCAACCCGCTCTAGGCTCAGC
ATACGGTGCTTCTCGAGAGTTACAGCGAAGTTGTGTGTGCGTGCTGTCAG
CTCAAAGGCTCAAACGCCGGGGGCGCCGCGGAAAGTACAGAGTTTGGAAT
CGTAGACACGTTGATTTTTTCGTGATTTTGAGATATCGACAACAAGTCCG
TTGTGTCCACAGCACTGCTGTGGAGCTGTGAGGAGGCGAGCTACGGTAGG
TAAAGTGTCTATACAACTCAGCAGGATGCTTACTCCCGGGCCTTTGTAAG
GGATACCAAGACCGCCCGTGCACCCCAAAGTCATAAAACAGTGACCAGAG
TTAGGTGTCACCAAATCGTCGCCAAACGGGCTCTTCCAGTACTAAAAGAG
TTAAGGCGCAACCGCTGGTGTTTGTTTTCGCAAGCGTATGTACATACCGC
CGTGTTTGTAGTCTGCAGACGGTGCCCTCACATAATGTAAGGCGCAACCG
CTGGTGTTTGTTTTCGCAAGCGTATGTACATACCGCCGTGTTTGTAGTCT
GCAGACGGTGTCCTCACAGGATGTAGCGCCGTTGCTGTCTTTGGTGGGTG
TACATGAGACATGCCCTTAGTGTTATGTTACTACACTCGTACTTCTATAC
AAACATCGCAGCACTGCTATTTACCGGGCATGCACGCCTCGTTGCCTTTT
CCCGTGCGCGTCTTTGCGTGTCTGCTCTGTTTCGTTCGGGATGCTTTTGA
AGCGAGTTTCTGTTGGTTGGTTGGTTGGTTGGTTCGATTCTCAGTAACAG
TTAGGCAAAACCCGGCGCCCGGGTGCCTTATCGAACCTTTGCGCTGCTGC
GCCCGAACCTTAGCTGCCCGACGGTGGCGAACCCCCCCCCCCCCCCCCCC
CCCCCTGCTCCTTGCTTTTTGCGCGCACAGGACAAGGTATTCGAATCGCT
GGAGGGCGACCAGTTGCAGCCTTACATGGACGCCATCGAGCTGGAAGGAA
ACGCGGCGCAACCCATGGACGAGGGGGGCGTGGCGGAGGAAAAGGTATAC
ACGCCACCCACCTTACCTTGACCTGTTTCGATCCCCCCCCCCCCCTTCGG
CAGACGTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTGCCCCACCCCCCT
TTTCCTTACACATATCCCTTTTCCCGCCCCCCCCGCCCCCCCGGCTCCCC
GGTGGGCCCCCCCCCCCCCCCCCCCGCGGGCGGGGTTTTTTTTTTTTTTT
TTTTTATAATATTTCTGGCACAGACACCTATTTTCTAGAACAATTCCTGT
TACGTGCCGAAAATGACAGAGACCACTGCTCAGCAAAAATTGTAGGAGAA
GTGATCACTTCGCAGACACTCTAATGCATACAACTGATAATATAGTGTGT
GTGTGTGTTTTTTTAATTGGGCAGGCAATATAAGCGGGAGGTTGGTACTC
TCTTCTCTCTGCACCCGCGCGCGGCGCCCCCCTTTCCTCTGCGCGGCGTG
CCTTTTTTGCCGATCAAGAGGCTGGGTTGTGTCTAAAGCCCGCGAGCGTG
TCTTGTCGTGGTTTGGTTCGAGCGCGACAAGCTTATACGAGCAGGCGCAA
ACCTGGTGCAGTTTTGTTTCGTTTCCCCCCACGATCCTACTTCTCGAGAT
CGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCT
TCCCGTTTATTTTGGCGACAGTCCCCCCAGTCAAGGGGAGACGTGTGCTA
CACCTTGCGGTGTACTTAAAAGGTACTACACTTTGCAGTGCATTTGTCTG
TACAACTAGAACCAACCGGGGTCACACAGGAGGGGGTGAACACTGGGGCT
TTTTTCTTCTTTTTTTTCTCTTTTTTTGCCCCACCTTCCTCCTGCGGTGC
TTTGCCTTCATTTTTATCGCGAGAAGGGTTCAGCTGTCCCTTCCCCTCGT
CAACGTGACTACGTCGAAGTTTGGTACTCACGAGCTTTTCAGCCTTTATC
GCTTTCACCTGCGAAGTCGCAAACGAGATTTTGCCTTATCGTTCGCCCTC
ACGTGTGCGTGCGTGCATTCACTCTGCACCCCCTTACTTCGATCGATACC
GTTCCATGGATGAAGTTTTTTTTTTCGTCCTTTTTCTCTCCATATTTATT
TCCAGTGCTCGATGGGCTTCTTGTCACGAGGGCATCTTGCCAGAGTACCG
AACCGTGGTCACACAGAAGAAAGAGTTCCTTTCCCTGAGGCCCCCACGAC
CCTAGGGGACTGCCTTCGCGAGGAGAAAACGGGGAATATTGGTTTATATG
TGAAATAGAGGCTGAAAAGCCCCAGTGTTCACCCCCTCCTGTGTGACCCC
GGTTGGTTCTAGTTGTACAGACAAATGGCACTGCAAAGTGTAGTACCTCT
TAAGTACACCGCAAGGTGTAGTACACGTCCCCCCTTGACTGGGGGGACTG
TCGCCAAAATAAATGGGAAGGACACACACATACACACATTTGAAATAGAG
TAGTAGGGGTTCCGTAACCCTAACACTAACCCTAACCCTAACCACCGACC
CCCCAAACATTCCCCGATTCCGTACTTTATGCTGTATGTTTCGCCGACCG
AAAACCTGCGTAGACTACCGAGCCCAGGAGTGCGTGTACTGTTATTGTTT
TTTACCAGCTCCGCGCCAGCTCCACTCTCCTTGCTAAATGTTGTGTGTAC
CTCTGCGACCCCTTCTGCCGCTTCTTGAGTTGCAGGCGCCTGCTCCGGAC
GCCGGGATGGCATGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig162:138..5302+

>mRNA_L-elsbetiae_contig162.4252.1 ID=mRNA_L-elsbetiae_contig162.4252.1|Name=mRNA_L-elsbetiae_contig162.4252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=978bp|location=Sequence derived from alignment at L-elsbetiae_contig162:138..5302+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGGCGAGTCGCCTGGTGCTAGACCTCGCGGACATGCACCAAAGGAC
CACCCAGAGCTACGTCCGGCGGCCGTACGGCGTGGGGATGCTCGTGGCCG
CGCATGATCAGACGGGGCCCCACCTGTTCCAGACCTGTCCCAGCGGCAAC
TATTTCGAGTACGTGGCCATGGCCATCGGCGCGCGATCGCAGTCGGCCAA
GACCTACCTCGAGAAGAACTTCGAGGAGTTCGAGATGCAGGCGAGTCGCC
TGGTGCTAGACCTCGCGGACATGCACCAAAGGACCACCCAGAGCTACGTC
CGGCGGCCGTACGGCGTGGGGATGCTCGTGGCCGCGCATGATCAGACGGG
GCCCCACCTGTTCCAGACCTGTCCCAGCGGCAACTATTTCGAGTACGTGG
CCATGGCCATCGGCGCGCGATCGCAGTCGGCCAAGACCTACCTCGAGAAG
AACTTCGAGGAGTTCGAGAACTGCGACCTGGACGAGTTGGTGAAGCACGC
CTTGAAGGCGTTATCTGGCTGCGTGACCGGGGACAAGGAGCTCGACGCGC
AGGGATGTACCCTCGCCATCGTCGGCAAGAACTGCGACCTGGACGAGTTG
GTGAAGCACGCCTTGAAGGCGTTATCTGGCTGCGTGACCGGGGACAAGGA
GCTCGACGCGCAGGGATGTACCCTCGCCATCGTCGGCAAGGACAAGGTAT
TCGAATCGCTGGAGGGCGACCAGTTGCAGCCTTACATGGACGCCATCGAG
CTGGAAGGAAACGCGGCGCAACCCATGGACGAGGGGGGCGTGGCGGAGGA
AAAGGACAAGGTATTCGAATCGCTGGAGGGCGACCAGTTGCAGCCTTACA
TGGACGCCATCGAGCTGGAAGGAAACGCGGCGCAACCCATGGACGAGGGG
GGCGTGGCGGAGGAAAAGGCGCCTGCTCCGGACGCCGGGATGGCATGAGC
GCCTGCTCCGGACGCCGGGATGGCATGA
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