mRNA_L-elsbetiae_contig16170.4241.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI) HSP 1 Score: 202 bits (514), Expect = 3.210e-61 Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 1 Query: 1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 303 MGI GLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGE+ Sbjct: 1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEL 101
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.220e-48 Identity = 81/102 (79.41%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEG-QSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 303 MGIQGLTKLL+DE PNC+KE DL+SLTGRK+A+DASMAMYQFLIAVRSG EG + MLTNEAGEVTSHIQGMFNRTI++L+ G+KP Y+FDGKPP LKGGE+ Sbjct: 1 MGIQGLTKLLNDECPNCIKEYDLNSLTGRKIAIDASMAMYQFLIAVRSGSEGVAATMLTNEAGEVTSHIQGMFNRTIKLLTSGLKPVYVFDGKPPTLKGGEL 102
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A7R9UCR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCR1_9STRA) HSP 1 Score: 159 bits (403), Expect = 4.480e-46 Identity = 74/102 (72.55%), Postives = 90/102 (88.24%), Query Frame = 1 Query: 1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEG-QSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 303 MGI+GLTKLL+DEAP C+KE +L S TGRKVA+DASMA+YQF+IA+RSG EG +Q+LTNE GE+TSHIQG+FNRTIRML+ G+KP Y+FDGKPP LK GE+ Sbjct: 1 MGIKGLTKLLNDEAPGCIKEAELSSYTGRKVAIDASMALYQFIIAIRSGSEGFAAQVLTNEQGEITSHIQGIFNRTIRMLTNGIKPVYVFDGKPPTLKSGEL 102
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A3R7CXE2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7CXE2_9STRA) HSP 1 Score: 155 bits (391), Expect = 6.750e-45 Identity = 71/103 (68.93%), Postives = 90/103 (87.38%), Query Frame = 1 Query: 1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 303 MGI+GL KLL+DEAP C+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE G +QMLTN+AG+VTSHIQGMFNRTIR++ G+KP Y+FDGKPP +KGGE+ Sbjct: 1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGEL 103
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A7R9W9K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9K6_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.040e-44 Identity = 71/102 (69.61%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQ-MLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 303 MGI+GL KLLSDEAP C++EV L SL GRKVA+DASMA+YQFLIAVRSGG + MLTN GE TSHIQGMFNRTIR +++G++P ++FDGKPPQ K GE+ Sbjct: 1 MGIKGLAKLLSDEAPECIREVPLSSLQGRKVAIDASMAIYQFLIAVRSGGPNSAAAMLTNADGETTSHIQGMFNRTIRFMTEGIRPAFVFDGKPPQFKSGEL 102
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A397ET37_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ET37_9STRA) HSP 1 Score: 155 bits (391), Expect = 5.330e-44 Identity = 71/103 (68.93%), Postives = 90/103 (87.38%), Query Frame = 1 Query: 1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 303 MGI+GL KLL+DEAP C+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE G +QMLTN+AG+VTSHIQGMFNRTIR++ G+KP Y+FDGKPP +KGGE+ Sbjct: 1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGEL 103
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A7S3HJ83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ83_9STRA) HSP 1 Score: 151 bits (381), Expect = 8.460e-44 Identity = 71/104 (68.27%), Postives = 89/104 (85.58%), Query Frame = 1 Query: 1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRS---GGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 303 MGI GL+KLL +E P +KE +L++ TGRK+A+DASMAMYQFL+AVRS GG GQ+ ML N+AGEVTSHIQGMFNRTIR+++ GV+P Y+FDGKPPQ+KGGE+ Sbjct: 6 MGIHGLSKLLQEECPAAIKEHELENFTGRKIAIDASMAMYQFLVAVRSAGPGGGGQAAMLMNDAGEVTSHIQGMFNRTIRIMTGGVRPVYVFDGKPPQMKGGEL 109
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: W4FTR5_9STRA (Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FTR5_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.010e-43 Identity = 71/103 (68.93%), Postives = 90/103 (87.38%), Query Frame = 1 Query: 1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 303 MGI+GL KLL+DEAP C+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE G +QMLTN+AG+VTSHIQGMFNRTIR++ G+KP Y+FDGKPP +KGGE+ Sbjct: 1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGEL 103
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A6G0WCI0_9STRA (Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCI0_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.100e-43 Identity = 72/103 (69.90%), Postives = 89/103 (86.41%), Query Frame = 1 Query: 1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 303 MGI+GL KLL+DEAP C+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE G +QMLTNEAGEVTSHIQGMFNRTIR++ G+KP Y+FDGKPP +K GE+ Sbjct: 1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNEAGEVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKSGEL 103
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Match: A0A1V9YW30_9STRA (Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YW30_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.180e-43 Identity = 73/103 (70.87%), Postives = 88/103 (85.44%), Query Frame = 1 Query: 1 MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEG--QSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGEV 303 MGI+GL KLL+DEAP C+KE+ + L+GR VA+DASMA+YQFLIAVRS G+G +QMLTNEAGEVTSHIQGMFNRTIR++ GVKP Y+FDGKPP +K GE+ Sbjct: 1 MGIKGLMKLLTDEAPTCVKELQMAQLSGRSVAIDASMALYQFLIAVRSNGDGGGTAQMLTNEAGEVTSHIQGMFNRTIRLMENGVKPVYVFDGKPPVMKSGEL 103 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16170.4241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16170.4241.1 >prot_L-elsbetiae_contig16170.4241.1 ID=prot_L-elsbetiae_contig16170.4241.1|Name=mRNA_L-elsbetiae_contig16170.4241.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp MGIQGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGback to top mRNA from alignment at L-elsbetiae_contig16170:463..1108- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16170.4241.1 ID=mRNA_L-elsbetiae_contig16170.4241.1|Name=mRNA_L-elsbetiae_contig16170.4241.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=646bp|location=Sequence derived from alignment at L-elsbetiae_contig16170:463..1108- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16170:463..1108- >mRNA_L-elsbetiae_contig16170.4241.1 ID=mRNA_L-elsbetiae_contig16170.4241.1|Name=mRNA_L-elsbetiae_contig16170.4241.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=612bp|location=Sequence derived from alignment at L-elsbetiae_contig16170:463..1108- (Laminarionema elsbetiae ELsaHSoW15)back to top |