mRNA_L-elsbetiae_contig16143.4218.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16143.4218.1 vs. uniprot
Match: D8LIN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN5_ECTSI) HSP 1 Score: 350 bits (897), Expect = 1.110e-116 Identity = 190/295 (64.41%), Postives = 209/295 (70.85%), Query Frame = 1 Query: 1 RTLIYTHVYAQVFQQLQQQFAALLLTVLAHFVLGFRPILLLQIFSTPYHFSENRLLRKFVLGLNPGYRVWGERFEGEIEQEKIKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----DNSNCLPMPRELEDKLIDAWEAAGEGDWGAVMELVGPFSVNTQTPVGKWSPLMVACGLSQVGTQDIKALVEDLDARADLRDQDGWTCLHWAAQQGRAAAARVVFEALAGLASEPTAAAAAIRDLRETRDAEGKTAADVAREAELESGALEAFLAVLENG 873 +T + H +VFQQLQQQF AL+LT+LAHFVLGFRPILLLQIFS PYHFSENRLLRK VLGL PGYRVWGERFEGE+E +K+KKE D SN LPMPRELEDKLIDAWEAAGEGD+GAVME +GPF+VNT+TP WSPLMVACGLSQVG DIKA+VEDLDA+ DL+DQDGWTCLHWAAQQGR AARV+FEAL +ASEPTAAA I+DL RDAEGKTAADVAR A L S LE FL VLE+G Sbjct: 91 KTTYFQHEMTEVFQQLQQQFVALMLTILAHFVLGFRPILLLQIFSAPYHFSENRLLRKLVLGLKPGYRVWGERFEGELEGDKVKKEEEAAPTAVADGEGAGDIPALDSSSAVATSATVKAEADPAVAIAAAVAGGDDGSNSLPMPRELEDKLIDAWEAAGEGDFGAVMEQLGPFTVNTRTPALGWSPLMVACGLSQVGEGDIKAMVEDLDAQVDLQDQDGWTCLHWAAQQGRVDAARVIFEALGSIASEPTAAATMIQDLLAMRDAEGKTAADVARGAGLASSDLEEFLGVLEDG 385
BLAST of mRNA_L-elsbetiae_contig16143.4218.1 vs. uniprot
Match: A0A6H5K295_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K295_9PHAE) HSP 1 Score: 322 bits (826), Expect = 1.480e-107 Identity = 176/272 (64.71%), Postives = 189/272 (69.49%), Query Frame = 1 Query: 70 LLTVLAHFVLGFRPILLLQIFSTPYHFSENRLLRKFVLGLNPGYRVWGERFEGEIEQEKIKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----DNSNCLPMPRELEDKLIDAWEAAGEGDWGAVMELVGPFSVNTQTPVGKWSPLMVACGLSQVGTQDIKALVEDLDARADLRDQDGWTCLHWAAQQGRAAAARVVFEALAGLASEPTAAAAAIRDLRETRDAEGKTAADVAREAELESGALEAFLAVLENG 873 +LT+LAHFVLGFRPILLLQIFSTPYHFSENRLLRKFVLGL PGYRVWGER EGE+E KIK E D SN LPMPRELEDKL+DAWEAAGEGD+GAVME +GPFSVNT+TP WSPLMVACGLSQVG DIKA+VED DA+ DL+DQDGWTCLHWAAQQGR AAR VFEAL +ASEP AAA I+DLR RDAEGKTAADVAR A L S LE L VLE+G Sbjct: 1 MLTILAHFVLGFRPILLLQIFSTPYHFSENRLLRKFVLGLKPGYRVWGERIEGELEGGKIKNEEEAAPTDVADGEGAGGIPGLGYSSAAAGSAAVKAEADPAATITAAVAGGDDGSNSLPMPRELEDKLVDAWEAAGEGDFGAVMEQLGPFSVNTRTPALGWSPLMVACGLSQVGEGDIKAMVEDFDAQVDLQDQDGWTCLHWAAQQGRVDAARAVFEALGSIASEPAAAATMIQDLRAMRDAEGKTAADVARGAGLASSDLEEILGVLEDG 272
BLAST of mRNA_L-elsbetiae_contig16143.4218.1 vs. uniprot
Match: K3X3L4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3L4_GLOUD) HSP 1 Score: 73.9 bits (180), Expect = 2.670e-11 Identity = 64/237 (27.00%), Postives = 91/237 (38.40%), Query Frame = 1 Query: 4 TLIYTHVYAQVFQQLQQQFAALLLTVLAHFVLGFRPILLLQIFSTPYHFSENRLLRKFVLGLNPGYRVWGERFEGEIEQEKIKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSNCLPMPRELEDKLIDAWEAAGEGDWGAVMELVGPFSVNTQTPVGKWSPLMVACGLSQVGTQDIKALVEDLDARADLRDQDGWTCLHWAAQQGRAAAARVVFEA 714 T TH +V + ++Q ++ HF +G ++L+Q TP + +N+L++ +VLG G R+WGER EGE +E L + L D EA + W AV SVNT + W+ LMVACG S + T D + A D DGW+ LHW+A GR AA + EA Sbjct: 86 TTYVTHELTKVNEFIKQTCIGAAISSFIHFKMGVNHVVLIQAVMTPMNLWDNQLVKAYVLGRQTG-RMWGERIEGETNEEAAIANGITPDGAAADAQPAKSSVKTVD-----------------------------LTPAEAITKALNDGAEADFDELWAAVKS-----SVNTVSKEDHWTALMVACG-SPIDTTDFIFNIISAGADVTAVDGDGWSALHWSAYHGRPEAAETLLEA 286
BLAST of mRNA_L-elsbetiae_contig16143.4218.1 vs. uniprot
Match: A0A196SIM2_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SIM2_BLAHN) HSP 1 Score: 58.9 bits (141), Expect = 2.380e-6 Identity = 30/96 (31.25%), Postives = 50/96 (52.08%), Query Frame = 1 Query: 430 LEDKLIDAWEAAGEGDWGAVMELVGPFSVNTQTPVGKWSPLMVACGLSQVGTQDIKALVEDLDARADLRDQDGWTCLHWAAQQGRAAAARVVFEAL 717 LED+++ W+ + +++L VNT T G W+ LMV G + G ++ + + +L D +GWTC+HWAA AA ++ E+L Sbjct: 137 LEDEIVKCWDDGEIATYDKLLKLCQLCGVNTTTEHG-WTALMVVFG-NPYGDMNVIPKLVGMGGNLELEDDEGWTCMHWAAYHNNVAAVELLLESL 230
BLAST of mRNA_L-elsbetiae_contig16143.4218.1 vs. uniprot
Match: D8M330_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M330_BLAHO) HSP 1 Score: 54.7 bits (130), Expect = 1.630e-5 Identity = 38/129 (29.46%), Postives = 58/129 (44.96%), Query Frame = 1 Query: 430 LEDKLIDAWEAAGEGDWGAVMELVGPFSVNTQTPVGKWSPLMVACGLSQVGTQDIKALVEDLDARADLRDQDGWTCLHWAAQQGRAAAARVVFEALAGLASEPTAAAAAIRDLRETRDAEGKTAADVAR 816 L+ ++ W+ + ++++L VNT T G W+PLMV G I LV+ L D +D +GWTCLHWAA + E T + + L ++ EG TA +VA+ Sbjct: 32 LKKEIQKCWDDGEVATYDSLLQLCSLAGVNTATEHG-WTPLMVIMGNPLGDMNAIDTLVK-LRVSIDAQDDEGWTCLHWAAYHNNVGGVEKLME---------TVGSVPVLKLLTVKNKEGLTALEVAK 149 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16143.4218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16143.4218.1 >prot_L-elsbetiae_contig16143.4218.1 ID=prot_L-elsbetiae_contig16143.4218.1|Name=mRNA_L-elsbetiae_contig16143.4218.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp RTLIYTHVYAQVFQQLQQQFAALLLTVLAHFVLGFRPILLLQIFSTPYHFback to top mRNA from alignment at L-elsbetiae_contig16143:98..2996- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16143.4218.1 ID=mRNA_L-elsbetiae_contig16143.4218.1|Name=mRNA_L-elsbetiae_contig16143.4218.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2899bp|location=Sequence derived from alignment at L-elsbetiae_contig16143:98..2996- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16143:98..2996- >mRNA_L-elsbetiae_contig16143.4218.1 ID=mRNA_L-elsbetiae_contig16143.4218.1|Name=mRNA_L-elsbetiae_contig16143.4218.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1788bp|location=Sequence derived from alignment at L-elsbetiae_contig16143:98..2996- (Laminarionema elsbetiae ELsaHSoW15)back to top |